# research_records

record_id: DS056_R00002
dataset_id: DS056
search_text: reciprocal_WT2_OE3_swap | WT1;WT2;WT3;OE1;OE2;OE3 | WT;OE;WT;OE;OE;WT | 29985 | 2575 | 5768 | 2776
record_json:
{"design":"reciprocal_WT2_OE3_swap","samples":"WT1;WT2;WT3;OE1;OE2;OE3","conditions":"WT;OE;WT;OE;OE;WT","tested_genes":"29985","paper_rule_fdr001_abs_raw_lfc_gt1":"2575","fdr005":"5768","strict_fdr005_abs_shrunk_lfc_gt1":"2776"}


record_id: DS056_R00003
dataset_id: DS056
search_text: exclude_WT2_and_OE3 | WT1;WT3;OE1;OE2 | WT;WT;OE;OE | 29590 | 2878 | 4674 | 3282
record_json:
{"design":"exclude_WT2_and_OE3","samples":"WT1;WT3;OE1;OE2","conditions":"WT;WT;OE;OE","tested_genes":"29590","paper_rule_fdr001_abs_raw_lfc_gt1":"2878","fdr005":"4674","strict_fdr005_abs_shrunk_lfc_gt1":"3282"}


record_id: DS056_R00004
dataset_id: DS056
search_text: five_traceable_runs | WT1;WT2;WT3;OE1;OE2 | WT;OE;WT;OE;OE | 29794 | 4085 | 8376 | 4269
record_json:
{"design":"five_traceable_runs","samples":"WT1;WT2;WT3;OE1;OE2","conditions":"WT;OE;WT;OE;OE","tested_genes":"29794","paper_rule_fdr001_abs_raw_lfc_gt1":"4085","fdr005":"8376","strict_fdr005_abs_shrunk_lfc_gt1":"4269"}


record_id: DS057_R00001
dataset_id: DS057
record_json:
{"gene_id":"Ma01_g04620","robust_pathway_count":"4","robust_module_count":"1","modules":"RNA and ribosome biogenesis","pathways":"GO:0001522 | pseudouridine synthesis;GO:0005730 | nucleolus;GO:0006364 | rRNA processing;GO:0042254 | ribosome biogenesis","all_three_pathway_count":"4","GO_annotation":"Biological Process: pseudouridine synthesis (GO:0001522);; Cellular Component: nucleolus (GO:0005730);; Biological Process: polar nucleus fusion (GO:0010197);; Cellular Component: Cajal body (GO:0015030);; Molecular Function: snoRNA binding (GO:0030515);; Biological Process: ribosome biogenesis (GO:0042254);; ","Swiss_Prot_annotation":"H/ACA ribonucleoprotein complex subunit 3-like protein","NR_annotation":"PREDICTED: H/ACA ribonucleoprotein complex subunit 3-like protein [Musa acuminata subsp. malaccensis]","recovery_log2fc":"1.4072858198051","recovery_shrunk_log2fc":"0.458540855392614","recovery_padj":"0.428984564876352","reciprocal_log2fc":"-0.508497515109957","reciprocal_shrunk_log2fc":"-0.467053416169956","reciprocal_padj":"0.131494033654196","exclude_pair_log2fc":"-0.57342405467698","exclude_pair_shrunk_log2fc":"-0.508955630214797","exclude_pair_padj":"0.248119253935839","five_traceable_log2fc":"-0.630233818893686","five_traceable_shrunk_log2fc":"-0.586966328667733","five_traceable_padj":"0.0444713888214604","paper_counts_log2fc":"-2.07916668347655","paper_counts_shrunk_log2fc":"-1.96707240076022","paper_counts_padj":"8.047352572194831e-19","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma01_g04620 | 4 | 1 | RNA and ribosome biogenesis | GO:0001522 | pseudouridine synthesis;GO:0005730 | nucleolus;GO:0006364 | rRNA processing;GO:0042254 | ribosome biogenesis | 4 | Biological Process: pseudouridine synthesis (GO:0001522);; Cellular Component: nucleolus (GO:0005730);; Biological Process: polar nucleus fusion (GO:0010197);; Cellular Component: Cajal body (GO:0015030);; Molecular Function: snoRNA binding (GO:0030515);; Biological Process: ribosome biogenesis (GO:0042254);;  | H/ACA ribonucleoprotein complex subunit 3-like protein | PREDICTED: H/ACA ribonucleoprotein complex subunit 3-like protein [Musa acuminata subsp. malaccensis] | 1.4072858198051 | 0.458540855392614 | 0.428984564876352 | -0.508497515109957 | -0.467053416169956 | 0.131494033654196 | -0.57342405467698 | -0.508955630214797 | 0.248119253935839 | -0.630233818893686 | -0.586966328667733 | 0.0444713888214604 | -2.07916668347655 | -1.96707240076022 | 8.047352572194831e-19 | True | True


record_id: DS057_R00002
dataset_id: DS057
record_json:
{"gene_id":"Ma01_g13820","robust_pathway_count":"4","robust_module_count":"1","modules":"Cell cycle and microtubules","pathways":"GO:0003777 | microtubule motor activity;GO:0005874 | microtubule;GO:0007018 | microtubule-based movement;GO:0008017 | microtubule binding","all_three_pathway_count":"4","GO_annotation":"Cellular Component: microtubule cytoskeleton (GO:0015630);; Molecular Function: nucleoside-triphosphatase activity (GO:0017111);; Cellular Component: cytoskeletal part (GO:0044430);; ","Swiss_Prot_annotation":"Kinesin-like protein KIN-10A","NR_annotation":"PREDICTED: kinesin-like protein KIN-10A [Musa acuminata subsp. malaccensis]","recovery_log2fc":"2.05778832757992","recovery_shrunk_log2fc":"0.64509784175224","recovery_padj":"0.164862475962184","reciprocal_log2fc":"-0.642581257633822","reciprocal_shrunk_log2fc":"-0.609048682348699","reciprocal_padj":"0.0071857488060851","exclude_pair_log2fc":"-0.558261414487714","exclude_pair_shrunk_log2fc":"-0.510956578773011","exclude_pair_padj":"0.169133270924133","five_traceable_log2fc":"-0.53882323472429","five_traceable_shrunk_log2fc":"-0.51534751984515","five_traceable_padj":"0.0263320690623936","paper_counts_log2fc":"-0.551909241008247","paper_counts_shrunk_log2fc":"-0.533928219198238","paper_counts_padj":"0.0052314736632648","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma01_g13820 | 4 | 1 | Cell cycle and microtubules | GO:0003777 | microtubule motor activity;GO:0005874 | microtubule;GO:0007018 | microtubule-based movement;GO:0008017 | microtubule binding | 4 | Cellular Component: microtubule cytoskeleton (GO:0015630);; Molecular Function: nucleoside-triphosphatase activity (GO:0017111);; Cellular Component: cytoskeletal part (GO:0044430);;  | Kinesin-like protein KIN-10A | PREDICTED: kinesin-like protein KIN-10A [Musa acuminata subsp. malaccensis] | 2.05778832757992 | 0.64509784175224 | 0.164862475962184 | -0.642581257633822 | -0.609048682348699 | 0.0071857488060851 | -0.558261414487714 | -0.510956578773011 | 0.169133270924133 | -0.53882323472429 | -0.51534751984515 | 0.0263320690623936 | -0.551909241008247 | -0.533928219198238 | 0.0052314736632648 | True | True


record_id: DS057_R00003
dataset_id: DS057
record_json:
{"gene_id":"Ma03_g11380","robust_pathway_count":"4","robust_module_count":"1","modules":"Cell cycle and microtubules","pathways":"GO:0003777 | microtubule motor activity;GO:0005874 | microtubule;GO:0007018 | microtubule-based movement;GO:0008017 | microtubule binding","all_three_pathway_count":"4","GO_annotation":"Molecular Function: microtubule motor activity (GO:0003777);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: kinesin complex (GO:0005871);; Biological Process: microtubule-based movement (GO:0007018);; Molecular Function: microtubule binding (GO:0008017);; Molecular Function: oxidoreductase activity (GO:0016491);; Molecular Function: ATPase activity (GO:0016887);; Biological Process: oxidation-reduction process (GO:0055114);; ","Swiss_Prot_annotation":"Kinesin-like protein KIN-14I","NR_annotation":"PREDICTED: kinesin-like calmodulin-binding protein homolog isoform X2 [Musa acuminata subsp. malaccensis]","recovery_log2fc":"1.56567090085074","recovery_shrunk_log2fc":"0.366282490589458","recovery_padj":"0.508329647471359","reciprocal_log2fc":"-0.356972033430448","reciprocal_shrunk_log2fc":"-0.347209575958207","reciprocal_padj":"0.0476788915147852","exclude_pair_log2fc":"-0.340324709523687","exclude_pair_shrunk_log2fc":"-0.317337466299114","exclude_pair_padj":"0.404103796702263","five_traceable_log2fc":"-0.327807384657258","five_traceable_shrunk_log2fc":"-0.318549300133747","five_traceable_padj":"0.107513821804724","paper_counts_log2fc":"-0.262722624864538","paper_counts_shrunk_log2fc":"-0.259073951592965","paper_counts_padj":"0.0486632404735305","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma03_g11380 | 4 | 1 | Cell cycle and microtubules | GO:0003777 | microtubule motor activity;GO:0005874 | microtubule;GO:0007018 | microtubule-based movement;GO:0008017 | microtubule binding | 4 | Molecular Function: microtubule motor activity (GO:0003777);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: kinesin complex (GO:0005871);; Biological Process: microtubule-based movement (GO:0007018);; Molecular Function: microtubule binding (GO:0008017);; Molecular Function: oxidoreductase activity (GO:0016491);; Molecular Function: ATPase activity (GO:0016887);; Biological Process: oxidation-reduction process (GO:0055114);;  | Kinesin-like protein KIN-14I | PREDICTED: kinesin-like calmodulin-binding protein homolog isoform X2 [Musa acuminata subsp. malaccensis] | 1.56567090085074 | 0.366282490589458 | 0.508329647471359 | -0.356972033430448 | -0.347209575958207 | 0.0476788915147852 | -0.340324709523687 | -0.317337466299114 | 0.404103796702263 | -0.327807384657258 | -0.318549300133747 | 0.107513821804724 | -0.262722624864538 | -0.259073951592965 | 0.0486632404735305 | True | True


record_id: DS057_R00004
dataset_id: DS057
record_json:
{"gene_id":"Ma03_g24260","robust_pathway_count":"4","robust_module_count":"1","modules":"Cell cycle and microtubules","pathways":"GO:0003777 | microtubule motor activity;GO:0005874 | microtubule;GO:0007018 | microtubule-based movement;GO:0008017 | microtubule binding","all_three_pathway_count":"4","GO_annotation":"--","Swiss_Prot_annotation":"Kinesin-like protein KIN-14H","NR_annotation":"PREDICTED: kinesin-5-like isoform X4 [Musa acuminata subsp. malaccensis]","recovery_log2fc":"0.84599256985048","recovery_shrunk_log2fc":"0.602221419350131","recovery_padj":"0.20183136489082","reciprocal_log2fc":"-0.785282547781527","reciprocal_shrunk_log2fc":"-0.756711274756385","reciprocal_padj":"2.11083481448824e-05","exclude_pair_log2fc":"-0.784672259955428","exclude_pair_shrunk_log2fc":"-0.723056592849039","exclude_pair_padj":"0.023637836271367","five_traceable_log2fc":"-0.806527743503625","five_traceable_shrunk_log2fc":"-0.775619740651097","five_traceable_padj":"0.0001294971082835","paper_counts_log2fc":"-0.849346326454383","paper_counts_shrunk_log2fc":"-0.834952730991982","paper_counts_padj":"1.02019203262496e-10","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma03_g24260 | 4 | 1 | Cell cycle and microtubules | GO:0003777 | microtubule motor activity;GO:0005874 | microtubule;GO:0007018 | microtubule-based movement;GO:0008017 | microtubule binding | 4 | -- | Kinesin-like protein KIN-14H | PREDICTED: kinesin-5-like isoform X4 [Musa acuminata subsp. malaccensis] | 0.84599256985048 | 0.602221419350131 | 0.20183136489082 | -0.785282547781527 | -0.756711274756385 | 2.11083481448824e-05 | -0.784672259955428 | -0.723056592849039 | 0.023637836271367 | -0.806527743503625 | -0.775619740651097 | 0.0001294971082835 | -0.849346326454383 | -0.834952730991982 | 1.02019203262496e-10 | True | True


record_id: DS057_R00005
dataset_id: DS057
record_json:
{"gene_id":"Ma03_g33430","robust_pathway_count":"4","robust_module_count":"1","modules":"RNA and ribosome biogenesis","pathways":"GO:0005730 | nucleolus;GO:0006364 | rRNA processing;GO:0008033 | tRNA processing;GO:0042254 | ribosome biogenesis","all_three_pathway_count":"4","GO_annotation":"Molecular Function: N-acetyltransferase activity (GO:0008080);; ","Swiss_Prot_annotation":"RNA cytidine acetyltransferase 1","NR_annotation":"PREDICTED: RNA cytidine acetyltransferase 1-like [Musa acuminata subsp. malaccensis]","recovery_log2fc":"0.467435962090603","recovery_shrunk_log2fc":"0.34439483608236","recovery_padj":"0.578049437978756","reciprocal_log2fc":"-0.547715347687882","reciprocal_shrunk_log2fc":"-0.499482957471991","reciprocal_padj":"0.116561055355024","exclude_pair_log2fc":"-0.792533110217045","exclude_pair_shrunk_log2fc":"-0.709062258650968","exclude_pair_padj":"0.0622647074256717","five_traceable_log2fc":"-0.657126243184942","five_traceable_shrunk_log2fc":"-0.60521700928532","five_traceable_padj":"0.0534828407081538","paper_counts_log2fc":"-0.751220301267243","paper_counts_shrunk_log2fc":"-0.72793217583933","paper_counts_padj":"5.18486899810426e-05","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma03_g33430 | 4 | 1 | RNA and ribosome biogenesis | GO:0005730 | nucleolus;GO:0006364 | rRNA processing;GO:0008033 | tRNA processing;GO:0042254 | ribosome biogenesis | 4 | Molecular Function: N-acetyltransferase activity (GO:0008080);;  | RNA cytidine acetyltransferase 1 | PREDICTED: RNA cytidine acetyltransferase 1-like [Musa acuminata subsp. malaccensis] | 0.467435962090603 | 0.34439483608236 | 0.578049437978756 | -0.547715347687882 | -0.499482957471991 | 0.116561055355024 | -0.792533110217045 | -0.709062258650968 | 0.0622647074256717 | -0.657126243184942 | -0.60521700928532 | 0.0534828407081538 | -0.751220301267243 | -0.72793217583933 | 5.18486899810426e-05 | True | True


record_id: DS057_R00006
dataset_id: DS057
record_json:
{"gene_id":"Ma05_g11390","robust_pathway_count":"4","robust_module_count":"1","modules":"RNA and ribosome biogenesis","pathways":"GO:0005730 | nucleolus;GO:0006364 | rRNA processing;GO:0032040 | small-subunit processome;GO:0042254 | ribosome biogenesis","all_three_pathway_count":"4","GO_annotation":"Cellular Component: small-subunit processome (GO:0032040);; ","Swiss_Prot_annotation":"--","NR_annotation":"PREDICTED: rRNA-processing protein FCF1 homolog [Musa acuminata subsp. malaccensis]","recovery_log2fc":"0.466902247354465","recovery_shrunk_log2fc":"0.247818913432745","recovery_padj":"0.7799374010787","reciprocal_log2fc":"-0.297957796029987","reciprocal_shrunk_log2fc":"-0.272760319618837","reciprocal_padj":"0.445280295589993","exclude_pair_log2fc":"-0.492680522103313","exclude_pair_shrunk_log2fc":"-0.434201940462342","exclude_pair_padj":"0.365988937809619","five_traceable_log2fc":"-0.360224517069323","five_traceable_shrunk_log2fc":"-0.330170797485298","five_traceable_padj":"0.361087961155979","paper_counts_log2fc":"-0.410790093815937","paper_counts_shrunk_log2fc":"-0.394933116166707","paper_counts_padj":"0.070823122567611","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma05_g11390 | 4 | 1 | RNA and ribosome biogenesis | GO:0005730 | nucleolus;GO:0006364 | rRNA processing;GO:0032040 | small-subunit processome;GO:0042254 | ribosome biogenesis | 4 | Cellular Component: small-subunit processome (GO:0032040);;  | -- | PREDICTED: rRNA-processing protein FCF1 homolog [Musa acuminata subsp. malaccensis] | 0.466902247354465 | 0.247818913432745 | 0.7799374010787 | -0.297957796029987 | -0.272760319618837 | 0.445280295589993 | -0.492680522103313 | -0.434201940462342 | 0.365988937809619 | -0.360224517069323 | -0.330170797485298 | 0.361087961155979 | -0.410790093815937 | -0.394933116166707 | 0.070823122567611 | True | True


record_id: DS057_R00007
dataset_id: DS057
record_json:
{"gene_id":"Ma06_g01770","robust_pathway_count":"4","robust_module_count":"1","modules":"RNA and ribosome biogenesis","pathways":"GO:0005730 | nucleolus;GO:0006364 | rRNA processing;GO:0032040 | small-subunit processome;GO:0042254 | ribosome biogenesis","all_three_pathway_count":"4","GO_annotation":"Cellular Component: nucleolus (GO:0005730);; Biological Process: maturation of SSU-rRNA (GO:0030490);; Cellular Component: Noc4p-Nop14p complex (GO:0030692);; Cellular Component: small-subunit processome (GO:0032040);; ","Swiss_Prot_annotation":"--","NR_annotation":"PREDICTED: nucleolar protein 14 [Musa acuminata subsp. malaccensis]","recovery_log2fc":"0.792856508072072","recovery_shrunk_log2fc":"0.631620908586281","recovery_padj":"0.100070319242012","reciprocal_log2fc":"-0.394766091762251","reciprocal_shrunk_log2fc":"-0.375798207039508","reciprocal_padj":"0.118096962143751","exclude_pair_log2fc":"-0.469200620268141","exclude_pair_shrunk_log2fc":"-0.428574573818908","exclude_pair_padj":"0.283911616043234","five_traceable_log2fc":"-0.439562339106986","five_traceable_shrunk_log2fc":"-0.418450546946491","five_traceable_padj":"0.100414621707578","paper_counts_log2fc":"-0.475589621175697","paper_counts_shrunk_log2fc":"-0.467728920365358","paper_counts_padj":"0.0004907160474102","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma06_g01770 | 4 | 1 | RNA and ribosome biogenesis | GO:0005730 | nucleolus;GO:0006364 | rRNA processing;GO:0032040 | small-subunit processome;GO:0042254 | ribosome biogenesis | 4 | Cellular Component: nucleolus (GO:0005730);; Biological Process: maturation of SSU-rRNA (GO:0030490);; Cellular Component: Noc4p-Nop14p complex (GO:0030692);; Cellular Component: small-subunit processome (GO:0032040);;  | -- | PREDICTED: nucleolar protein 14 [Musa acuminata subsp. malaccensis] | 0.792856508072072 | 0.631620908586281 | 0.100070319242012 | -0.394766091762251 | -0.375798207039508 | 0.118096962143751 | -0.469200620268141 | -0.428574573818908 | 0.283911616043234 | -0.439562339106986 | -0.418450546946491 | 0.100414621707578 | -0.475589621175697 | -0.467728920365358 | 0.0004907160474102 | True | True


record_id: DS057_R00008
dataset_id: DS057
record_json:
{"gene_id":"Ma06_g35010","robust_pathway_count":"4","robust_module_count":"1","modules":"Cell cycle and microtubules","pathways":"GO:0003777 | microtubule motor activity;GO:0005874 | microtubule;GO:0007018 | microtubule-based movement;GO:0008017 | microtubule binding","all_three_pathway_count":"4","GO_annotation":"Molecular Function: ATP binding (GO:0005524);; Cellular Component: kinesin complex (GO:0005871);; Biological Process: microtubule-based movement (GO:0007018);; Molecular Function: microtubule binding (GO:0008017);; Molecular Function: ATP-dependent microtubule motor activity, plus-end-directed (GO:0008574);; ","Swiss_Prot_annotation":"Kinesin-like protein KIN-5A","NR_annotation":"PREDICTED: kinesin-like protein KIN-5A [Musa acuminata subsp. malaccensis]","recovery_log2fc":"1.29402982781656","recovery_shrunk_log2fc":"0.379764271875544","recovery_padj":"0.530909681389813","reciprocal_log2fc":"-0.629946129363289","reciprocal_shrunk_log2fc":"-0.576704394211604","reciprocal_padj":"0.0550942186183432","exclude_pair_log2fc":"-0.447592819607773","exclude_pair_shrunk_log2fc":"-0.395605121445737","exclude_pair_padj":"0.418958811825465","five_traceable_log2fc":"-0.467261154547038","five_traceable_shrunk_log2fc":"-0.435643851030884","five_traceable_padj":"0.154953262962074","paper_counts_log2fc":"-0.59406565278556","paper_counts_shrunk_log2fc":"-0.569264115697594","paper_counts_padj":"0.0087183067268673","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma06_g35010 | 4 | 1 | Cell cycle and microtubules | GO:0003777 | microtubule motor activity;GO:0005874 | microtubule;GO:0007018 | microtubule-based movement;GO:0008017 | microtubule binding | 4 | Molecular Function: ATP binding (GO:0005524);; Cellular Component: kinesin complex (GO:0005871);; Biological Process: microtubule-based movement (GO:0007018);; Molecular Function: microtubule binding (GO:0008017);; Molecular Function: ATP-dependent microtubule motor activity, plus-end-directed (GO:0008574);;  | Kinesin-like protein KIN-5A | PREDICTED: kinesin-like protein KIN-5A [Musa acuminata subsp. malaccensis] | 1.29402982781656 | 0.379764271875544 | 0.530909681389813 | -0.629946129363289 | -0.576704394211604 | 0.0550942186183432 | -0.447592819607773 | -0.395605121445737 | 0.418958811825465 | -0.467261154547038 | -0.435643851030884 | 0.154953262962074 | -0.59406565278556 | -0.569264115697594 | 0.0087183067268673 | True | True


record_id: DS057_R00009
dataset_id: DS057
record_json:
{"gene_id":"Ma06_g38480","robust_pathway_count":"4","robust_module_count":"1","modules":"Cell cycle and microtubules","pathways":"GO:0003777 | microtubule motor activity;GO:0005874 | microtubule;GO:0007018 | microtubule-based movement;GO:0008017 | microtubule binding","all_three_pathway_count":"4","GO_annotation":"Molecular Function: binding (GO:0005488);; Cellular Component: microtubule cytoskeleton (GO:0015630);; Molecular Function: nucleoside-triphosphatase activity (GO:0017111);; Cellular Component: cytoskeletal part (GO:0044430);; ","Swiss_Prot_annotation":"Kinesin-like protein KIN-10A","NR_annotation":"PREDICTED: kinesin-like protein KIN-10A [Musa acuminata subsp. malaccensis]","recovery_log2fc":"1.31374532880518","recovery_shrunk_log2fc":"0.968675714596143","recovery_padj":"0.0073729143757092","reciprocal_log2fc":"-0.676866023758433","reciprocal_shrunk_log2fc":"-0.630183929791311","reciprocal_padj":"0.0165662534269685","exclude_pair_log2fc":"-0.604243025998292","exclude_pair_shrunk_log2fc":"-0.530455001444251","exclude_pair_padj":"0.244815870240441","five_traceable_log2fc":"-0.607543085421522","five_traceable_shrunk_log2fc":"-0.565981081162496","five_traceable_padj":"0.0537065221972956","paper_counts_log2fc":"-0.787585307211749","paper_counts_shrunk_log2fc":"-0.7417821814322","paper_counts_padj":"0.0030721320220929","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma06_g38480 | 4 | 1 | Cell cycle and microtubules | GO:0003777 | microtubule motor activity;GO:0005874 | microtubule;GO:0007018 | microtubule-based movement;GO:0008017 | microtubule binding | 4 | Molecular Function: binding (GO:0005488);; Cellular Component: microtubule cytoskeleton (GO:0015630);; Molecular Function: nucleoside-triphosphatase activity (GO:0017111);; Cellular Component: cytoskeletal part (GO:0044430);;  | Kinesin-like protein KIN-10A | PREDICTED: kinesin-like protein KIN-10A [Musa acuminata subsp. malaccensis] | 1.31374532880518 | 0.968675714596143 | 0.0073729143757092 | -0.676866023758433 | -0.630183929791311 | 0.0165662534269685 | -0.604243025998292 | -0.530455001444251 | 0.244815870240441 | -0.607543085421522 | -0.565981081162496 | 0.0537065221972956 | -0.787585307211749 | -0.7417821814322 | 0.0030721320220929 | True | True


record_id: DS057_R00010
dataset_id: DS057
record_json:
{"gene_id":"Ma07_g07360","robust_pathway_count":"4","robust_module_count":"1","modules":"RNA and ribosome biogenesis","pathways":"GO:0005730 | nucleolus;GO:0006364 | rRNA processing;GO:0032040 | small-subunit processome;GO:0042254 | ribosome biogenesis","all_three_pathway_count":"4","GO_annotation":"Molecular Function: RNA binding (GO:0003723);; Cellular Component: nucleolus (GO:0005730);; Biological Process: mRNA processing (GO:0006397);; Cellular Component: small-subunit processome (GO:0032040);; ","Swiss_Prot_annotation":"rRNA biogenesis protein RRP5","NR_annotation":"PREDICTED: rRNA biogenesis protein RRP5 [Musa acuminata subsp. malaccensis]","recovery_log2fc":"0.695901697065802","recovery_shrunk_log2fc":"0.471410277393599","recovery_padj":"0.415183743649479","reciprocal_log2fc":"-0.341963872710323","reciprocal_shrunk_log2fc":"-0.327055173132048","reciprocal_padj":"0.163344910135935","exclude_pair_log2fc":"-0.458914065656995","exclude_pair_shrunk_log2fc":"-0.425660083932075","exclude_pair_padj":"0.236185936757634","five_traceable_log2fc":"-0.442717094766531","five_traceable_shrunk_log2fc":"-0.428863327853697","five_traceable_padj":"0.0308719937094725","paper_counts_log2fc":"-0.393489159319873","paper_counts_shrunk_log2fc":"-0.390446145757706","paper_counts_padj":"1.56301216172513e-05","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma07_g07360 | 4 | 1 | RNA and ribosome biogenesis | GO:0005730 | nucleolus;GO:0006364 | rRNA processing;GO:0032040 | small-subunit processome;GO:0042254 | ribosome biogenesis | 4 | Molecular Function: RNA binding (GO:0003723);; Cellular Component: nucleolus (GO:0005730);; Biological Process: mRNA processing (GO:0006397);; Cellular Component: small-subunit processome (GO:0032040);;  | rRNA biogenesis protein RRP5 | PREDICTED: rRNA biogenesis protein RRP5 [Musa acuminata subsp. malaccensis] | 0.695901697065802 | 0.471410277393599 | 0.415183743649479 | -0.341963872710323 | -0.327055173132048 | 0.163344910135935 | -0.458914065656995 | -0.425660083932075 | 0.236185936757634 | -0.442717094766531 | -0.428863327853697 | 0.0308719937094725 | -0.393489159319873 | -0.390446145757706 | 1.56301216172513e-05 | True | True


record_id: DS057_R00011
dataset_id: DS057
record_json:
{"gene_id":"Ma07_g28620","robust_pathway_count":"4","robust_module_count":"1","modules":"Cell cycle and microtubules","pathways":"GO:0000278 | mitotic cell cycle;GO:0003777 | microtubule motor activity;GO:0005874 | microtubule;GO:0007018 | microtubule-based movement","all_three_pathway_count":"4","GO_annotation":"Molecular Function: nucleotide binding (GO:0000166);; Molecular Function: microtubule motor activity (GO:0003777);; Cellular Component: kinesin complex (GO:0005871);; Biological Process: microtubule-based movement (GO:0007018);; Molecular Function: ATPase activity (GO:0016887);; ","Swiss_Prot_annotation":"Kinesin-like protein KIN-7L","NR_annotation":"PREDICTED: kinesin-like protein KIN-7L [Musa acuminata subsp. malaccensis]","recovery_log2fc":"2.05514105085186","recovery_shrunk_log2fc":"0.138652346932717","recovery_padj":"","reciprocal_log2fc":"-0.985445809769677","reciprocal_shrunk_log2fc":"-0.927864080946639","reciprocal_padj":"3.38778682474915e-05","exclude_pair_log2fc":"-0.928651771385112","exclude_pair_shrunk_log2fc":"-0.828579367278527","exclude_pair_padj":"0.0247412248464228","five_traceable_log2fc":"-0.943040587546792","five_traceable_shrunk_log2fc":"-0.886612654325531","five_traceable_padj":"0.0004641764583701","paper_counts_log2fc":"-1.03539026422733","paper_counts_shrunk_log2fc":"-0.991242675550365","paper_counts_padj":"1.59680605903786e-06","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma07_g28620 | 4 | 1 | Cell cycle and microtubules | GO:0000278 | mitotic cell cycle;GO:0003777 | microtubule motor activity;GO:0005874 | microtubule;GO:0007018 | microtubule-based movement | 4 | Molecular Function: nucleotide binding (GO:0000166);; Molecular Function: microtubule motor activity (GO:0003777);; Cellular Component: kinesin complex (GO:0005871);; Biological Process: microtubule-based movement (GO:0007018);; Molecular Function: ATPase activity (GO:0016887);;  | Kinesin-like protein KIN-7L | PREDICTED: kinesin-like protein KIN-7L [Musa acuminata subsp. malaccensis] | 2.05514105085186 | 0.138652346932717 | -0.985445809769677 | -0.927864080946639 | 3.38778682474915e-05 | -0.928651771385112 | -0.828579367278527 | 0.0247412248464228 | -0.943040587546792 | -0.886612654325531 | 0.0004641764583701 | -1.03539026422733 | -0.991242675550365 | 1.59680605903786e-06 | True | True


record_id: DS057_R00012
dataset_id: DS057
record_json:
{"gene_id":"Ma08_g19480","robust_pathway_count":"4","robust_module_count":"1","modules":"Cell cycle and microtubules","pathways":"GO:0003777 | microtubule motor activity;GO:0005874 | microtubule;GO:0007018 | microtubule-based movement;GO:0008017 | microtubule binding","all_three_pathway_count":"4","GO_annotation":"Molecular Function: nucleotide binding (GO:0000166);; Molecular Function: microtubule motor activity (GO:0003777);; Cellular Component: kinesin complex (GO:0005871);; Biological Process: microtubule-based movement (GO:0007018);; Molecular Function: ATPase activity (GO:0016887);; ","Swiss_Prot_annotation":"Kinesin-like protein KIN-13B","NR_annotation":"PREDICTED: kinesin-like protein KIN-13B isoform X1 [Musa acuminata subsp. malaccensis]","recovery_log2fc":"1.73980197696521","recovery_shrunk_log2fc":"0.681411499182656","recovery_padj":"0.164862475962184","reciprocal_log2fc":"-0.373863453829577","reciprocal_shrunk_log2fc":"-0.360518237990388","reciprocal_padj":"0.0764321438501471","exclude_pair_log2fc":"-0.433094490232109","exclude_pair_shrunk_log2fc":"-0.400696087231185","exclude_pair_padj":"0.284319541516198","five_traceable_log2fc":"-0.400460493031443","five_traceable_shrunk_log2fc":"-0.385597658603258","five_traceable_padj":"0.0844055298378282","paper_counts_log2fc":"-0.304909309975191","paper_counts_shrunk_log2fc":"-0.295442467569362","paper_counts_padj":"0.143932400444805","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma08_g19480 | 4 | 1 | Cell cycle and microtubules | GO:0003777 | microtubule motor activity;GO:0005874 | microtubule;GO:0007018 | microtubule-based movement;GO:0008017 | microtubule binding | 4 | Molecular Function: nucleotide binding (GO:0000166);; Molecular Function: microtubule motor activity (GO:0003777);; Cellular Component: kinesin complex (GO:0005871);; Biological Process: microtubule-based movement (GO:0007018);; Molecular Function: ATPase activity (GO:0016887);;  | Kinesin-like protein KIN-13B | PREDICTED: kinesin-like protein KIN-13B isoform X1 [Musa acuminata subsp. malaccensis] | 1.73980197696521 | 0.681411499182656 | 0.164862475962184 | -0.373863453829577 | -0.360518237990388 | 0.0764321438501471 | -0.433094490232109 | -0.400696087231185 | 0.284319541516198 | -0.400460493031443 | -0.385597658603258 | 0.0844055298378282 | -0.304909309975191 | -0.295442467569362 | 0.143932400444805 | True | True


record_id: DS057_R00013
dataset_id: DS057
record_json:
{"gene_id":"Ma09_g01640","robust_pathway_count":"4","robust_module_count":"1","modules":"Cell cycle and microtubules","pathways":"GO:0003777 | microtubule motor activity;GO:0005874 | microtubule;GO:0007018 | microtubule-based movement;GO:0008017 | microtubule binding","all_three_pathway_count":"4","GO_annotation":"Molecular Function: nucleotide binding (GO:0000166);; ","Swiss_Prot_annotation":"Kinesin-like protein KIN-12A","NR_annotation":"PREDICTED: kinesin-like protein KIN-12A [Musa acuminata subsp. malaccensis]","recovery_log2fc":"1.11526613550069","recovery_shrunk_log2fc":"0.643194836543034","recovery_padj":"0.214400945626304","reciprocal_log2fc":"-0.728999369316821","reciprocal_shrunk_log2fc":"-0.699390140159346","reciprocal_padj":"0.000265480970071","exclude_pair_log2fc":"-0.731574655173496","exclude_pair_shrunk_log2fc":"-0.670492005463587","exclude_pair_padj":"0.0477941483514041","five_traceable_log2fc":"-0.717801441421639","five_traceable_shrunk_log2fc":"-0.687039545097275","five_traceable_padj":"0.0017213603094769","paper_counts_log2fc":"-0.751830252764562","paper_counts_shrunk_log2fc":"-0.740950745797551","paper_counts_padj":"6.28497525092662e-10","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma09_g01640 | 4 | 1 | Cell cycle and microtubules | GO:0003777 | microtubule motor activity;GO:0005874 | microtubule;GO:0007018 | microtubule-based movement;GO:0008017 | microtubule binding | 4 | Molecular Function: nucleotide binding (GO:0000166);;  | Kinesin-like protein KIN-12A | PREDICTED: kinesin-like protein KIN-12A [Musa acuminata subsp. malaccensis] | 1.11526613550069 | 0.643194836543034 | 0.214400945626304 | -0.728999369316821 | -0.699390140159346 | 0.000265480970071 | -0.731574655173496 | -0.670492005463587 | 0.0477941483514041 | -0.717801441421639 | -0.687039545097275 | 0.0017213603094769 | -0.751830252764562 | -0.740950745797551 | 6.28497525092662e-10 | True | True


record_id: DS057_R00014
dataset_id: DS057
record_json:
{"gene_id":"Ma10_g09310","robust_pathway_count":"4","robust_module_count":"1","modules":"Cell cycle and microtubules","pathways":"GO:0003777 | microtubule motor activity;GO:0005874 | microtubule;GO:0007018 | microtubule-based movement;GO:0008017 | microtubule binding","all_three_pathway_count":"4","GO_annotation":"Molecular Function: binding (GO:0005488);; Biological Process: single-organism cellular process (GO:0044763);; ","Swiss_Prot_annotation":"Kinesin-like protein KIN-12F","NR_annotation":"PREDICTED: kinesin-like protein KIN-12F [Musa acuminata subsp. malaccensis]","recovery_log2fc":"0.823255916579891","recovery_shrunk_log2fc":"0.676506296783033","recovery_padj":"0.0490232165308283","reciprocal_log2fc":"-1.05967381528133","reciprocal_shrunk_log2fc":"-1.00353293130833","reciprocal_padj":"1.64096030914935e-06","exclude_pair_log2fc":"-1.07619363479899","exclude_pair_shrunk_log2fc":"-0.97535591788212","exclude_pair_padj":"0.002827521108826","five_traceable_log2fc":"-1.06028371187171","five_traceable_shrunk_log2fc":"-1.00202504607427","five_traceable_padj":"2.58487264796476e-05","paper_counts_log2fc":"-1.03966764641076","paper_counts_shrunk_log2fc":"-1.01689540162348","paper_counts_padj":"3.07869000731455e-12","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma10_g09310 | 4 | 1 | Cell cycle and microtubules | GO:0003777 | microtubule motor activity;GO:0005874 | microtubule;GO:0007018 | microtubule-based movement;GO:0008017 | microtubule binding | 4 | Molecular Function: binding (GO:0005488);; Biological Process: single-organism cellular process (GO:0044763);;  | Kinesin-like protein KIN-12F | PREDICTED: kinesin-like protein KIN-12F [Musa acuminata subsp. malaccensis] | 0.823255916579891 | 0.676506296783033 | 0.0490232165308283 | -1.05967381528133 | -1.00353293130833 | 1.64096030914935e-06 | -1.07619363479899 | -0.97535591788212 | 0.002827521108826 | -1.06028371187171 | -1.00202504607427 | 2.58487264796476e-05 | -1.03966764641076 | -1.01689540162348 | 3.07869000731455e-12 | True | True


record_id: DS057_R00015
dataset_id: DS057
record_json:
{"gene_id":"Ma10_g18480","robust_pathway_count":"4","robust_module_count":"1","modules":"Cell cycle and microtubules","pathways":"GO:0003777 | microtubule motor activity;GO:0005874 | microtubule;GO:0007018 | microtubule-based movement;GO:0008017 | microtubule binding","all_three_pathway_count":"4","GO_annotation":"Molecular Function: binding (GO:0005488);; ","Swiss_Prot_annotation":"Kinesin-like protein KIN-12C","NR_annotation":"PREDICTED: kinesin-like protein KIN-12C [Musa acuminata subsp. malaccensis]","recovery_log2fc":"0.859577452343674","recovery_shrunk_log2fc":"0.688214121086914","recovery_padj":"0.057965368427685","reciprocal_log2fc":"-0.51570084183584","reciprocal_shrunk_log2fc":"-0.459964213268757","reciprocal_padj":"0.204199770518219","exclude_pair_log2fc":"-0.757994967786559","exclude_pair_shrunk_log2fc":"-0.662582339625769","exclude_pair_padj":"0.123200253320303","five_traceable_log2fc":"-0.654361287897923","five_traceable_shrunk_log2fc":"-0.593050360142194","five_traceable_padj":"0.0859010015609957","paper_counts_log2fc":"-0.671321782050379","paper_counts_shrunk_log2fc":"-0.62854581654984","paper_counts_padj":"0.0193092640730838","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma10_g18480 | 4 | 1 | Cell cycle and microtubules | GO:0003777 | microtubule motor activity;GO:0005874 | microtubule;GO:0007018 | microtubule-based movement;GO:0008017 | microtubule binding | 4 | Molecular Function: binding (GO:0005488);;  | Kinesin-like protein KIN-12C | PREDICTED: kinesin-like protein KIN-12C [Musa acuminata subsp. malaccensis] | 0.859577452343674 | 0.688214121086914 | 0.057965368427685 | -0.51570084183584 | -0.459964213268757 | 0.204199770518219 | -0.757994967786559 | -0.662582339625769 | 0.123200253320303 | -0.654361287897923 | -0.593050360142194 | 0.0859010015609957 | -0.671321782050379 | -0.62854581654984 | 0.0193092640730838 | True | True


record_id: DS057_R00016
dataset_id: DS057
record_json:
{"gene_id":"Ma11_g16560","robust_pathway_count":"4","robust_module_count":"1","modules":"Cell cycle and microtubules","pathways":"GO:0003777 | microtubule motor activity;GO:0005874 | microtubule;GO:0007018 | microtubule-based movement;GO:0008017 | microtubule binding","all_three_pathway_count":"4","GO_annotation":"--","Swiss_Prot_annotation":"Kinesin-like protein KIN-14P","NR_annotation":"PREDICTED: kinesin-4-like isoform X2 [Musa acuminata subsp. malaccensis]","recovery_log2fc":"0.941918865599811","recovery_shrunk_log2fc":"0.826877219646811","recovery_padj":"0.0011896260046868","reciprocal_log2fc":"-0.646805042322032","reciprocal_shrunk_log2fc":"-0.613680007256337","reciprocal_padj":"0.0061138023415706","exclude_pair_log2fc":"-0.687565600767562","exclude_pair_shrunk_log2fc":"-0.619115683705089","exclude_pair_padj":"0.106413945167708","five_traceable_log2fc":"-0.625795290059649","five_traceable_shrunk_log2fc":"-0.592125361822044","five_traceable_padj":"0.0201255636503618","paper_counts_log2fc":"-0.647570857427831","paper_counts_shrunk_log2fc":"-0.625673291944339","paper_counts_padj":"0.0010760517456836","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma11_g16560 | 4 | 1 | Cell cycle and microtubules | GO:0003777 | microtubule motor activity;GO:0005874 | microtubule;GO:0007018 | microtubule-based movement;GO:0008017 | microtubule binding | 4 | -- | Kinesin-like protein KIN-14P | PREDICTED: kinesin-4-like isoform X2 [Musa acuminata subsp. malaccensis] | 0.941918865599811 | 0.826877219646811 | 0.0011896260046868 | -0.646805042322032 | -0.613680007256337 | 0.0061138023415706 | -0.687565600767562 | -0.619115683705089 | 0.106413945167708 | -0.625795290059649 | -0.592125361822044 | 0.0201255636503618 | -0.647570857427831 | -0.625673291944339 | 0.0010760517456836 | True | True


record_id: DS057_R00017
dataset_id: DS057
record_json:
{"gene_id":"Ma02_g13770","robust_pathway_count":"3","robust_module_count":"1","modules":"Cell cycle and microtubules","pathways":"GO:0003777 | microtubule motor activity;GO:0005874 | microtubule;GO:0007018 | microtubule-based movement","all_three_pathway_count":"3","GO_annotation":"Molecular Function: microtubule motor activity (GO:0003777);; Molecular Function: binding (GO:0005488);; Cellular Component: kinesin complex (GO:0005871);; Biological Process: microtubule-based movement (GO:0007018);; Molecular Function: ATPase activity (GO:0016887);; ","Swiss_Prot_annotation":"Kinesin-like protein KIN-7F","NR_annotation":"PREDICTED: kinesin-like protein KIN-7F isoform X1 [Musa acuminata subsp. malaccensis] ","recovery_log2fc":"0.443715925405187","recovery_shrunk_log2fc":"0.278342747441185","recovery_padj":"0.731165534374651","reciprocal_log2fc":"-0.529243873191467","reciprocal_shrunk_log2fc":"-0.512214902512513","reciprocal_padj":"0.0039630022461784","exclude_pair_log2fc":"-0.457593647687603","exclude_pair_shrunk_log2fc":"-0.424155155856748","exclude_pair_padj":"0.240907591165327","five_traceable_log2fc":"-0.490161253294804","five_traceable_shrunk_log2fc":"-0.474206510141201","five_traceable_padj":"0.0175647114833967","paper_counts_log2fc":"-0.42489823026158","paper_counts_shrunk_log2fc":"-0.416031983901702","paper_counts_padj":"0.0071188346001605","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma02_g13770 | 3 | 1 | Cell cycle and microtubules | GO:0003777 | microtubule motor activity;GO:0005874 | microtubule;GO:0007018 | microtubule-based movement | 3 | Molecular Function: microtubule motor activity (GO:0003777);; Molecular Function: binding (GO:0005488);; Cellular Component: kinesin complex (GO:0005871);; Biological Process: microtubule-based movement (GO:0007018);; Molecular Function: ATPase activity (GO:0016887);;  | Kinesin-like protein KIN-7F | PREDICTED: kinesin-like protein KIN-7F isoform X1 [Musa acuminata subsp. malaccensis]  | 0.443715925405187 | 0.278342747441185 | 0.731165534374651 | -0.529243873191467 | -0.512214902512513 | 0.0039630022461784 | -0.457593647687603 | -0.424155155856748 | 0.240907591165327 | -0.490161253294804 | -0.474206510141201 | 0.0175647114833967 | -0.42489823026158 | -0.416031983901702 | 0.0071188346001605 | True | True


record_id: DS057_R00018
dataset_id: DS057
record_json:
{"gene_id":"Ma02_g14200","robust_pathway_count":"3","robust_module_count":"1","modules":"RNA and ribosome biogenesis","pathways":"GO:0005730 | nucleolus;GO:0006364 | rRNA processing;GO:0042254 | ribosome biogenesis","all_three_pathway_count":"3","GO_annotation":"--","Swiss_Prot_annotation":"--","NR_annotation":"PREDICTED: WD repeat-containing protein 75 [Musa acuminata subsp. malaccensis]","recovery_log2fc":"1.36398694074335","recovery_shrunk_log2fc":"0.336847331289512","recovery_padj":"0.573861380543502","reciprocal_log2fc":"-0.316732604839771","reciprocal_shrunk_log2fc":"-0.290987605499192","reciprocal_padj":"0.397887804476035","exclude_pair_log2fc":"-0.452050243987592","exclude_pair_shrunk_log2fc":"-0.399496660084409","exclude_pair_padj":"0.412751436286524","five_traceable_log2fc":"-0.344359777524989","five_traceable_shrunk_log2fc":"-0.315961701913637","five_traceable_padj":"0.382848080184883","paper_counts_log2fc":"-0.513438946689556","paper_counts_shrunk_log2fc":"-0.499336873761794","paper_counts_padj":"0.0044770499984712","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma02_g14200 | 3 | 1 | RNA and ribosome biogenesis | GO:0005730 | nucleolus;GO:0006364 | rRNA processing;GO:0042254 | ribosome biogenesis | 3 | -- | -- | PREDICTED: WD repeat-containing protein 75 [Musa acuminata subsp. malaccensis] | 1.36398694074335 | 0.336847331289512 | 0.573861380543502 | -0.316732604839771 | -0.290987605499192 | 0.397887804476035 | -0.452050243987592 | -0.399496660084409 | 0.412751436286524 | -0.344359777524989 | -0.315961701913637 | 0.382848080184883 | -0.513438946689556 | -0.499336873761794 | 0.0044770499984712 | True | True


record_id: DS057_R00019
dataset_id: DS057
record_json:
{"gene_id":"Ma02_g19010","robust_pathway_count":"3","robust_module_count":"1","modules":"Cell cycle and microtubules","pathways":"GO:0000278 | mitotic cell cycle;GO:0005874 | microtubule;GO:0007017 | microtubule-based process","all_three_pathway_count":"3","GO_annotation":"Molecular Function: GTPase activity (GO:0003924);; Molecular Function: structural constituent of cytoskeleton (GO:0005200);; Molecular Function: GTP binding (GO:0005525);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: microtubule (GO:0005874);; Biological Process: microtubule-based process (GO:0007017);; ","Swiss_Prot_annotation":"Tubulin alpha-1 chain","NR_annotation":"tubulin alpha chain [Quercus suber]","recovery_log2fc":"0.645098704759708","recovery_shrunk_log2fc":"0.573165002238214","recovery_padj":"0.0394904803822937","reciprocal_log2fc":"-0.84195200813732","reciprocal_shrunk_log2fc":"-0.795357684904397","reciprocal_padj":"0.0003594047715638","exclude_pair_log2fc":"-0.85670995727858","exclude_pair_shrunk_log2fc":"-0.782254987886528","exclude_pair_padj":"0.0182054207228242","five_traceable_log2fc":"-0.789876686041273","five_traceable_shrunk_log2fc":"-0.746989327108236","five_traceable_padj":"0.0024397734247121","paper_counts_log2fc":"-0.817343977469312","paper_counts_shrunk_log2fc":"-0.774710304187351","paper_counts_padj":"0.0009900412171847","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma02_g19010 | 3 | 1 | Cell cycle and microtubules | GO:0000278 | mitotic cell cycle;GO:0005874 | microtubule;GO:0007017 | microtubule-based process | 3 | Molecular Function: GTPase activity (GO:0003924);; Molecular Function: structural constituent of cytoskeleton (GO:0005200);; Molecular Function: GTP binding (GO:0005525);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: microtubule (GO:0005874);; Biological Process: microtubule-based process (GO:0007017);;  | Tubulin alpha-1 chain | tubulin alpha chain [Quercus suber] | 0.645098704759708 | 0.573165002238214 | 0.0394904803822937 | -0.84195200813732 | -0.795357684904397 | 0.0003594047715638 | -0.85670995727858 | -0.782254987886528 | 0.0182054207228242 | -0.789876686041273 | -0.746989327108236 | 0.0024397734247121 | -0.817343977469312 | -0.774710304187351 | 0.0009900412171847 | True | True


record_id: DS057_R00020
dataset_id: DS057
record_json:
{"gene_id":"Ma03_g24770","robust_pathway_count":"3","robust_module_count":"1","modules":"Cell cycle and microtubules","pathways":"GO:0000278 | mitotic cell cycle;GO:0005874 | microtubule;GO:0007017 | microtubule-based process","all_three_pathway_count":"3","GO_annotation":"Molecular Function: GTPase activity (GO:0003924);; Molecular Function: structural constituent of cytoskeleton (GO:0005200);; Molecular Function: GTP binding (GO:0005525);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: microtubule (GO:0005874);; Biological Process: microtubule-based process (GO:0007017);; ","Swiss_Prot_annotation":"Tubulin beta-5 chain","NR_annotation":"PREDICTED: tubulin beta chain-like [Musa acuminata subsp. malaccensis]","recovery_log2fc":"0.419306485945673","recovery_shrunk_log2fc":"0.367557668443477","recovery_padj":"0.336792313925576","reciprocal_log2fc":"-0.663494179695438","reciprocal_shrunk_log2fc":"-0.63768584886961","reciprocal_padj":"0.0007892947568495","exclude_pair_log2fc":"-0.731391088167374","exclude_pair_shrunk_log2fc":"-0.683992266003427","exclude_pair_padj":"0.0181453148089163","five_traceable_log2fc":"-0.761720013748407","five_traceable_shrunk_log2fc":"-0.74180395469735","five_traceable_padj":"7.23191566079954e-06","paper_counts_log2fc":"-0.761759101237753","paper_counts_shrunk_log2fc":"-0.754816970224722","paper_counts_padj":"8.89249816948808e-16","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma03_g24770 | 3 | 1 | Cell cycle and microtubules | GO:0000278 | mitotic cell cycle;GO:0005874 | microtubule;GO:0007017 | microtubule-based process | 3 | Molecular Function: GTPase activity (GO:0003924);; Molecular Function: structural constituent of cytoskeleton (GO:0005200);; Molecular Function: GTP binding (GO:0005525);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: microtubule (GO:0005874);; Biological Process: microtubule-based process (GO:0007017);;  | Tubulin beta-5 chain | PREDICTED: tubulin beta chain-like [Musa acuminata subsp. malaccensis] | 0.419306485945673 | 0.367557668443477 | 0.336792313925576 | -0.663494179695438 | -0.63768584886961 | 0.0007892947568495 | -0.731391088167374 | -0.683992266003427 | 0.0181453148089163 | -0.761720013748407 | -0.74180395469735 | 7.23191566079954e-06 | -0.761759101237753 | -0.754816970224722 | 8.89249816948808e-16 | True | True


record_id: DS057_R00021
dataset_id: DS057
record_json:
{"gene_id":"Ma04_g05500","robust_pathway_count":"3","robust_module_count":"1","modules":"Cell cycle and microtubules","pathways":"GO:0000278 | mitotic cell cycle;GO:0005874 | microtubule;GO:0007017 | microtubule-based process","all_three_pathway_count":"3","GO_annotation":"Molecular Function: GTPase activity (GO:0003924);; Molecular Function: structural constituent of cytoskeleton (GO:0005200);; Molecular Function: GTP binding (GO:0005525);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: microtubule (GO:0005874);; Biological Process: microtubule-based process (GO:0007017);; ","Swiss_Prot_annotation":"Tubulin beta-1 chain","NR_annotation":"PREDICTED: tubulin beta-2 chain [Musa acuminata subsp. malaccensis]","recovery_log2fc":"0.381670673256234","recovery_shrunk_log2fc":"0.263926248688964","recovery_padj":"0.734053859156403","reciprocal_log2fc":"-0.672908190168625","reciprocal_shrunk_log2fc":"-0.638286869159737","reciprocal_padj":"0.0041728807168418","exclude_pair_log2fc":"-0.527241951321028","exclude_pair_shrunk_log2fc":"-0.493100376524415","exclude_pair_padj":"0.121807495378969","five_traceable_log2fc":"-0.511635642340961","five_traceable_shrunk_log2fc":"-0.498886108710142","five_traceable_padj":"0.003349376666648","paper_counts_log2fc":"-0.511613789982823","paper_counts_shrunk_log2fc":"-0.50180479700775","paper_counts_padj":"0.0005083750906926","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma04_g05500 | 3 | 1 | Cell cycle and microtubules | GO:0000278 | mitotic cell cycle;GO:0005874 | microtubule;GO:0007017 | microtubule-based process | 3 | Molecular Function: GTPase activity (GO:0003924);; Molecular Function: structural constituent of cytoskeleton (GO:0005200);; Molecular Function: GTP binding (GO:0005525);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: microtubule (GO:0005874);; Biological Process: microtubule-based process (GO:0007017);;  | Tubulin beta-1 chain | PREDICTED: tubulin beta-2 chain [Musa acuminata subsp. malaccensis] | 0.381670673256234 | 0.263926248688964 | 0.734053859156403 | -0.672908190168625 | -0.638286869159737 | 0.0041728807168418 | -0.527241951321028 | -0.493100376524415 | 0.121807495378969 | -0.511635642340961 | -0.498886108710142 | 0.003349376666648 | -0.511613789982823 | -0.50180479700775 | 0.0005083750906926 | True | True


record_id: DS057_R00022
dataset_id: DS057
record_json:
{"gene_id":"Ma04_g38720","robust_pathway_count":"3","robust_module_count":"1","modules":"RNA and ribosome biogenesis","pathways":"GO:0005730 | nucleolus;GO:0006364 | rRNA processing;GO:0042254 | ribosome biogenesis","all_three_pathway_count":"3","GO_annotation":"Biological Process: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (GO:0000462);; Biological Process: cleavage involved in rRNA processing (GO:0000469);; Cellular Component: nucleolus (GO:0005730);; Cellular Component: 90S preribosome (GO:0030686);; ","Swiss_Prot_annotation":"--","NR_annotation":"PREDICTED: ribosomal RNA processing protein 36 homolog [Musa acuminata subsp. malaccensis] ","recovery_log2fc":"0.840712632644624","recovery_shrunk_log2fc":"0.506260295685019","recovery_padj":"0.395356681767632","reciprocal_log2fc":"-0.258964370636349","reciprocal_shrunk_log2fc":"-0.241574200504825","reciprocal_padj":"0.454522395369539","exclude_pair_log2fc":"-0.424978044449198","exclude_pair_shrunk_log2fc":"-0.375490070258588","exclude_pair_padj":"0.45055804016137","five_traceable_log2fc":"-0.351814911020338","five_traceable_shrunk_log2fc":"-0.33075237504316","five_traceable_padj":"0.271411236579477","paper_counts_log2fc":"-0.199533896097354","paper_counts_shrunk_log2fc":"-0.194375293102378","paper_counts_padj":"0.317605817726987","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma04_g38720 | 3 | 1 | RNA and ribosome biogenesis | GO:0005730 | nucleolus;GO:0006364 | rRNA processing;GO:0042254 | ribosome biogenesis | 3 | Biological Process: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (GO:0000462);; Biological Process: cleavage involved in rRNA processing (GO:0000469);; Cellular Component: nucleolus (GO:0005730);; Cellular Component: 90S preribosome (GO:0030686);;  | -- | PREDICTED: ribosomal RNA processing protein 36 homolog [Musa acuminata subsp. malaccensis]  | 0.840712632644624 | 0.506260295685019 | 0.395356681767632 | -0.258964370636349 | -0.241574200504825 | 0.454522395369539 | -0.424978044449198 | -0.375490070258588 | 0.45055804016137 | -0.351814911020338 | -0.33075237504316 | 0.271411236579477 | -0.199533896097354 | -0.194375293102378 | 0.317605817726987 | True | True


record_id: DS057_R00023
dataset_id: DS057
record_json:
{"gene_id":"Ma05_g26320","robust_pathway_count":"3","robust_module_count":"1","modules":"Cell cycle and microtubules","pathways":"GO:0003777 | microtubule motor activity;GO:0005874 | microtubule;GO:0007018 | microtubule-based movement","all_three_pathway_count":"3","GO_annotation":"Molecular Function: nucleotide binding (GO:0000166);; ","Swiss_Prot_annotation":"Kinesin-like protein KIN-4C","NR_annotation":"PREDICTED: kinesin-like protein KIN-4C isoform X1 [Musa acuminata subsp. malaccensis]","recovery_log2fc":"0.183817362280434","recovery_shrunk_log2fc":"0.165722334369494","recovery_padj":"0.743844616406373","reciprocal_log2fc":"-0.716458629886472","reciprocal_shrunk_log2fc":"-0.680844957696051","reciprocal_padj":"0.0015844364750586","exclude_pair_log2fc":"-0.594289371513585","exclude_pair_shrunk_log2fc":"-0.55017571850737","exclude_pair_padj":"0.0998097305888842","five_traceable_log2fc":"-0.589727409226578","five_traceable_shrunk_log2fc":"-0.569184578100513","five_traceable_padj":"0.0046582731409238","paper_counts_log2fc":"-0.581102502453554","paper_counts_shrunk_log2fc":"-0.572190093413815","paper_counts_padj":"5.83489593824474e-06","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma05_g26320 | 3 | 1 | Cell cycle and microtubules | GO:0003777 | microtubule motor activity;GO:0005874 | microtubule;GO:0007018 | microtubule-based movement | 3 | Molecular Function: nucleotide binding (GO:0000166);;  | Kinesin-like protein KIN-4C | PREDICTED: kinesin-like protein KIN-4C isoform X1 [Musa acuminata subsp. malaccensis] | 0.183817362280434 | 0.165722334369494 | 0.743844616406373 | -0.716458629886472 | -0.680844957696051 | 0.0015844364750586 | -0.594289371513585 | -0.55017571850737 | 0.0998097305888842 | -0.589727409226578 | -0.569184578100513 | 0.0046582731409238 | -0.581102502453554 | -0.572190093413815 | 5.83489593824474e-06 | True | True


record_id: DS057_R00024
dataset_id: DS057
record_json:
{"gene_id":"Ma05_g29040","robust_pathway_count":"3","robust_module_count":"1","modules":"Cell cycle and microtubules","pathways":"GO:0000278 | mitotic cell cycle;GO:0005874 | microtubule;GO:0007017 | microtubule-based process","all_three_pathway_count":"3","GO_annotation":"Molecular Function: GTPase activity (GO:0003924);; Molecular Function: structural constituent of cytoskeleton (GO:0005200);; Molecular Function: GTP binding (GO:0005525);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: microtubule (GO:0005874);; Biological Process: microtubule-based process (GO:0007017);; ","Swiss_Prot_annotation":"Tubulin beta-5 chain","NR_annotation":"PREDICTED: tubulin beta chain-like [Musa acuminata subsp. malaccensis]","recovery_log2fc":"0.599076367944953","recovery_shrunk_log2fc":"0.560937945148113","recovery_padj":"0.0044925036573229","reciprocal_log2fc":"-0.667574332188906","reciprocal_shrunk_log2fc":"-0.641638260297787","reciprocal_padj":"0.0007148143325789","exclude_pair_log2fc":"-0.766803659926959","exclude_pair_shrunk_log2fc":"-0.712576253411336","exclude_pair_padj":"0.0180844052946814","five_traceable_log2fc":"-0.745398213264143","five_traceable_shrunk_log2fc":"-0.721250271773466","five_traceable_padj":"0.0001110170038199","paper_counts_log2fc":"-0.657370375128448","paper_counts_shrunk_log2fc":"-0.645010363749234","paper_counts_padj":"3.63426924105035e-06","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma05_g29040 | 3 | 1 | Cell cycle and microtubules | GO:0000278 | mitotic cell cycle;GO:0005874 | microtubule;GO:0007017 | microtubule-based process | 3 | Molecular Function: GTPase activity (GO:0003924);; Molecular Function: structural constituent of cytoskeleton (GO:0005200);; Molecular Function: GTP binding (GO:0005525);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: microtubule (GO:0005874);; Biological Process: microtubule-based process (GO:0007017);;  | Tubulin beta-5 chain | PREDICTED: tubulin beta chain-like [Musa acuminata subsp. malaccensis] | 0.599076367944953 | 0.560937945148113 | 0.0044925036573229 | -0.667574332188906 | -0.641638260297787 | 0.0007148143325789 | -0.766803659926959 | -0.712576253411336 | 0.0180844052946814 | -0.745398213264143 | -0.721250271773466 | 0.0001110170038199 | -0.657370375128448 | -0.645010363749234 | 3.63426924105035e-06 | True | True


record_id: DS057_R00025
dataset_id: DS057
record_json:
{"gene_id":"Ma06_g02330","robust_pathway_count":"3","robust_module_count":"1","modules":"Cell cycle and microtubules","pathways":"GO:0000278 | mitotic cell cycle;GO:0005874 | microtubule;GO:0007017 | microtubule-based process","all_three_pathway_count":"3","GO_annotation":"Molecular Function: GTPase activity (GO:0003924);; Molecular Function: structural constituent of cytoskeleton (GO:0005200);; Molecular Function: GTP binding (GO:0005525);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: microtubule (GO:0005874);; Biological Process: microtubule-based process (GO:0007017);; ","Swiss_Prot_annotation":"Tubulin alpha chain","NR_annotation":"tubulin alpha chain [Quercus suber]","recovery_log2fc":"0.921544196917621","recovery_shrunk_log2fc":"0.825134001305309","recovery_padj":"0.000407860441945","reciprocal_log2fc":"-0.554615508431223","reciprocal_shrunk_log2fc":"-0.511170414595747","reciprocal_padj":"0.0843146981878716","exclude_pair_log2fc":"-0.764010756187595","exclude_pair_shrunk_log2fc":"-0.702416874009485","exclude_pair_padj":"0.0320215233197615","five_traceable_log2fc":"-0.740284501605844","five_traceable_shrunk_log2fc":"-0.714572426842272","five_traceable_padj":"0.0002312291706297","paper_counts_log2fc":"-0.665762904907861","paper_counts_shrunk_log2fc":"-0.648309656854202","paper_counts_padj":"9.7423571134954e-05","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma06_g02330 | 3 | 1 | Cell cycle and microtubules | GO:0000278 | mitotic cell cycle;GO:0005874 | microtubule;GO:0007017 | microtubule-based process | 3 | Molecular Function: GTPase activity (GO:0003924);; Molecular Function: structural constituent of cytoskeleton (GO:0005200);; Molecular Function: GTP binding (GO:0005525);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: microtubule (GO:0005874);; Biological Process: microtubule-based process (GO:0007017);;  | Tubulin alpha chain | tubulin alpha chain [Quercus suber] | 0.921544196917621 | 0.825134001305309 | 0.000407860441945 | -0.554615508431223 | -0.511170414595747 | 0.0843146981878716 | -0.764010756187595 | -0.702416874009485 | 0.0320215233197615 | -0.740284501605844 | -0.714572426842272 | 0.0002312291706297 | -0.665762904907861 | -0.648309656854202 | 9.7423571134954e-05 | True | True


record_id: DS057_R00026
dataset_id: DS057
record_json:
{"gene_id":"Ma06_g17580","robust_pathway_count":"3","robust_module_count":"1","modules":"Cell cycle and microtubules","pathways":"GO:0000278 | mitotic cell cycle;GO:0005874 | microtubule;GO:0007017 | microtubule-based process","all_three_pathway_count":"3","GO_annotation":"Molecular Function: GTPase activity (GO:0003924);; Molecular Function: structural constituent of cytoskeleton (GO:0005200);; Molecular Function: GTP binding (GO:0005525);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: microtubule (GO:0005874);; Biological Process: microtubule-based process (GO:0007017);; ","Swiss_Prot_annotation":"Tubulin beta-4 chain","NR_annotation":"PREDICTED: tubulin beta-1 chain [Musa acuminata subsp. malaccensis] ","recovery_log2fc":"0.328927726163182","recovery_shrunk_log2fc":"0.289909786155768","recovery_padj":"0.493282262290027","reciprocal_log2fc":"-0.701944613276481","reciprocal_shrunk_log2fc":"-0.647670811991774","reciprocal_padj":"0.0201367206879262","exclude_pair_log2fc":"-0.800054697458062","exclude_pair_shrunk_log2fc":"-0.733802068351699","exclude_pair_padj":"0.0253501447958952","five_traceable_log2fc":"-0.866866544082196","five_traceable_shrunk_log2fc":"-0.824825961271131","five_traceable_padj":"0.0003043899784516","paper_counts_log2fc":"-0.760214526006992","paper_counts_shrunk_log2fc":"-0.754192076702021","paper_counts_padj":"5.27524089015145e-18","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma06_g17580 | 3 | 1 | Cell cycle and microtubules | GO:0000278 | mitotic cell cycle;GO:0005874 | microtubule;GO:0007017 | microtubule-based process | 3 | Molecular Function: GTPase activity (GO:0003924);; Molecular Function: structural constituent of cytoskeleton (GO:0005200);; Molecular Function: GTP binding (GO:0005525);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: microtubule (GO:0005874);; Biological Process: microtubule-based process (GO:0007017);;  | Tubulin beta-4 chain | PREDICTED: tubulin beta-1 chain [Musa acuminata subsp. malaccensis]  | 0.328927726163182 | 0.289909786155768 | 0.493282262290027 | -0.701944613276481 | -0.647670811991774 | 0.0201367206879262 | -0.800054697458062 | -0.733802068351699 | 0.0253501447958952 | -0.866866544082196 | -0.824825961271131 | 0.0003043899784516 | -0.760214526006992 | -0.754192076702021 | 5.27524089015145e-18 | True | True


record_id: DS057_R00027
dataset_id: DS057
record_json:
{"gene_id":"Ma06_g18040","robust_pathway_count":"3","robust_module_count":"1","modules":"RNA and ribosome biogenesis","pathways":"GO:0005730 | nucleolus;GO:0006364 | rRNA processing;GO:0032040 | small-subunit processome","all_three_pathway_count":"3","GO_annotation":"Biological Process: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (GO:0000462);; Cellular Component: nucleolus (GO:0005730);; Cellular Component: 90S preribosome (GO:0030686);; Cellular Component: small-subunit processome (GO:0032040);; ","Swiss_Prot_annotation":"Katanin p80 WD40 repeat-containing subunit B1 homolog","NR_annotation":"PREDICTED: probable U3 small nucleolar RNA-associated protein 7 [Musa acuminata subsp. malaccensis]","recovery_log2fc":"0.397039423177904","recovery_shrunk_log2fc":"0.305136247899476","recovery_padj":"0.623515579376432","reciprocal_log2fc":"-0.160752890400536","reciprocal_shrunk_log2fc":"-0.156123861734987","reciprocal_padj":"0.472556194668627","exclude_pair_log2fc":"-0.223756951938582","exclude_pair_shrunk_log2fc":"-0.207836967981911","exclude_pair_padj":"0.643442608284997","five_traceable_log2fc":"-0.194436992215467","five_traceable_shrunk_log2fc":"-0.188686266306662","five_traceable_padj":"0.400342018910507","paper_counts_log2fc":"0.218382461928537","paper_counts_shrunk_log2fc":"0.199918898031409","paper_counts_padj":"0.587760703951717","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma06_g18040 | 3 | 1 | RNA and ribosome biogenesis | GO:0005730 | nucleolus;GO:0006364 | rRNA processing;GO:0032040 | small-subunit processome | 3 | Biological Process: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (GO:0000462);; Cellular Component: nucleolus (GO:0005730);; Cellular Component: 90S preribosome (GO:0030686);; Cellular Component: small-subunit processome (GO:0032040);;  | Katanin p80 WD40 repeat-containing subunit B1 homolog | PREDICTED: probable U3 small nucleolar RNA-associated protein 7 [Musa acuminata subsp. malaccensis] | 0.397039423177904 | 0.305136247899476 | 0.623515579376432 | -0.160752890400536 | -0.156123861734987 | 0.472556194668627 | -0.223756951938582 | -0.207836967981911 | 0.643442608284997 | -0.194436992215467 | -0.188686266306662 | 0.400342018910507 | 0.218382461928537 | 0.199918898031409 | 0.587760703951717 | True | True


record_id: DS057_R00028
dataset_id: DS057
record_json:
{"gene_id":"Ma06_g21310","robust_pathway_count":"3","robust_module_count":"1","modules":"Cell cycle and microtubules","pathways":"GO:0000278 | mitotic cell cycle;GO:0005874 | microtubule;GO:0007017 | microtubule-based process","all_three_pathway_count":"3","GO_annotation":"Molecular Function: GTPase activity (GO:0003924);; Molecular Function: structural constituent of cytoskeleton (GO:0005200);; Molecular Function: GTP binding (GO:0005525);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: microtubule (GO:0005874);; Biological Process: microtubule-based process (GO:0007017);; ","Swiss_Prot_annotation":"Tubulin beta-5 chain","NR_annotation":"PREDICTED: tubulin beta chain [Musa acuminata subsp. malaccensis]","recovery_log2fc":"0.166360082190828","recovery_shrunk_log2fc":"0.157054953225271","recovery_padj":"0.654482971433457","reciprocal_log2fc":"-0.697324514310771","reciprocal_shrunk_log2fc":"-0.678748943159729","reciprocal_padj":"7.84745290782727e-06","exclude_pair_log2fc":"-0.687583545845288","exclude_pair_shrunk_log2fc":"-0.638417967361139","exclude_pair_padj":"0.0419069285792655","five_traceable_log2fc":"-0.69802692726331","five_traceable_shrunk_log2fc":"-0.677634166464012","five_traceable_padj":"0.0001380583688746","paper_counts_log2fc":"-0.66893346311317","paper_counts_shrunk_log2fc":"-0.657716898500883","paper_counts_padj":"4.98006067240478e-07","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma06_g21310 | 3 | 1 | Cell cycle and microtubules | GO:0000278 | mitotic cell cycle;GO:0005874 | microtubule;GO:0007017 | microtubule-based process | 3 | Molecular Function: GTPase activity (GO:0003924);; Molecular Function: structural constituent of cytoskeleton (GO:0005200);; Molecular Function: GTP binding (GO:0005525);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: microtubule (GO:0005874);; Biological Process: microtubule-based process (GO:0007017);;  | Tubulin beta-5 chain | PREDICTED: tubulin beta chain [Musa acuminata subsp. malaccensis] | 0.166360082190828 | 0.157054953225271 | 0.654482971433457 | -0.697324514310771 | -0.678748943159729 | 7.84745290782727e-06 | -0.687583545845288 | -0.638417967361139 | 0.0419069285792655 | -0.69802692726331 | -0.677634166464012 | 0.0001380583688746 | -0.66893346311317 | -0.657716898500883 | 4.98006067240478e-07 | True | True


record_id: DS057_R00029
dataset_id: DS057
record_json:
{"gene_id":"Ma06_g26000","robust_pathway_count":"3","robust_module_count":"1","modules":"Cell cycle and microtubules","pathways":"GO:0003777 | microtubule motor activity;GO:0005874 | microtubule;GO:0007018 | microtubule-based movement","all_three_pathway_count":"3","GO_annotation":"Molecular Function: binding (GO:0005488);; ","Swiss_Prot_annotation":"Kinesin-like protein KIN-12G","NR_annotation":"PREDICTED: kinesin-like protein KIN-12G isoform X2 [Musa acuminata subsp. malaccensis]","recovery_log2fc":"0.923793730058672","recovery_shrunk_log2fc":"0.311393860481755","recovery_padj":"0.672599087406725","reciprocal_log2fc":"-1.08760737436541","reciprocal_shrunk_log2fc":"-1.05030311813807","reciprocal_padj":"1.4929015716298101e-10","exclude_pair_log2fc":"-1.08331606800977","exclude_pair_shrunk_log2fc":"-1.00057763356583","exclude_pair_padj":"0.000557617158517","five_traceable_log2fc":"-1.0720398170746","five_traceable_shrunk_log2fc":"-1.03317342066975","five_traceable_padj":"5.27979225520443e-08","paper_counts_log2fc":"-1.08848546807664","paper_counts_shrunk_log2fc":"-1.06559764246539","paper_counts_padj":"7.094374696729981e-14","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma06_g26000 | 3 | 1 | Cell cycle and microtubules | GO:0003777 | microtubule motor activity;GO:0005874 | microtubule;GO:0007018 | microtubule-based movement | 3 | Molecular Function: binding (GO:0005488);;  | Kinesin-like protein KIN-12G | PREDICTED: kinesin-like protein KIN-12G isoform X2 [Musa acuminata subsp. malaccensis] | 0.923793730058672 | 0.311393860481755 | 0.672599087406725 | -1.08760737436541 | -1.05030311813807 | 1.4929015716298101e-10 | -1.08331606800977 | -1.00057763356583 | 0.000557617158517 | -1.0720398170746 | -1.03317342066975 | 5.27979225520443e-08 | -1.08848546807664 | -1.06559764246539 | 7.094374696729981e-14 | True | True


record_id: DS057_R00030
dataset_id: DS057
record_json:
{"gene_id":"Ma08_g02860","robust_pathway_count":"3","robust_module_count":"1","modules":"RNA and ribosome biogenesis","pathways":"GO:0005730 | nucleolus;GO:0006364 | rRNA processing;GO:0032040 | small-subunit processome","all_three_pathway_count":"3","GO_annotation":"Biological Process: rRNA processing (GO:0006364);; Molecular Function: snoRNA binding (GO:0030515);; Cellular Component: small-subunit processome (GO:0032040);; ","Swiss_Prot_annotation":"U3 snoRNP-associated protein-like YAOH","NR_annotation":"PREDICTED: U3 snoRNP-associated protein-like YAOH isoform X1 [Musa acuminata subsp. malaccensis]","recovery_log2fc":"1.27909015868056","recovery_shrunk_log2fc":"0.870179392640822","recovery_padj":"0.0330298966844951","reciprocal_log2fc":"-0.436800141039645","reciprocal_shrunk_log2fc":"-0.415963458914774","reciprocal_padj":"0.0749403963992538","exclude_pair_log2fc":"-0.45043583087125","exclude_pair_shrunk_log2fc":"-0.406218423337301","exclude_pair_padj":"0.355481674494402","five_traceable_log2fc":"-0.499099279566006","five_traceable_shrunk_log2fc":"-0.476252163605916","five_traceable_padj":"0.0489462754837113","paper_counts_log2fc":"-0.395519734477227","paper_counts_shrunk_log2fc":"-0.383260268026","paper_counts_padj":"0.0489386596909044","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma08_g02860 | 3 | 1 | RNA and ribosome biogenesis | GO:0005730 | nucleolus;GO:0006364 | rRNA processing;GO:0032040 | small-subunit processome | 3 | Biological Process: rRNA processing (GO:0006364);; Molecular Function: snoRNA binding (GO:0030515);; Cellular Component: small-subunit processome (GO:0032040);;  | U3 snoRNP-associated protein-like YAOH | PREDICTED: U3 snoRNP-associated protein-like YAOH isoform X1 [Musa acuminata subsp. malaccensis] | 1.27909015868056 | 0.870179392640822 | 0.0330298966844951 | -0.436800141039645 | -0.415963458914774 | 0.0749403963992538 | -0.45043583087125 | -0.406218423337301 | 0.355481674494402 | -0.499099279566006 | -0.476252163605916 | 0.0489462754837113 | -0.395519734477227 | -0.383260268026 | 0.0489386596909044 | True | True


record_id: DS057_R00031
dataset_id: DS057
record_json:
{"gene_id":"Ma08_g04980","robust_pathway_count":"3","robust_module_count":"1","modules":"RNA and ribosome biogenesis","pathways":"GO:0005730 | nucleolus;GO:0032040 | small-subunit processome;GO:0042254 | ribosome biogenesis","all_three_pathway_count":"3","GO_annotation":"Biological Process: mRNA splicing, via spliceosome (GO:0000398);; Biological Process: maturation of LSU-rRNA (GO:0000470);; Molecular Function: RNA binding (GO:0003723);; Biological Process: translation (GO:0006412);; Cellular Component: cytosolic large ribosomal subunit (GO:0022625);; Biological Process: maturation of SSU-rRNA (GO:0030490);; Cellular Component: box C/D snoRNP complex (GO:0031428);; Cellular Component: small-subunit processome (GO:0032040);; Cellular Component: U4/U6 x U5 tri-snRNP complex (GO:0046540);; Cellular Component: precatalytic spliceosome (GO:0071011);; ","Swiss_Prot_annotation":"H/ACA ribonucleoprotein complex subunit 2-like protein","NR_annotation":"unnamed protein product, partial [Vitis vinifera]","recovery_log2fc":"0.375035285361624","recovery_shrunk_log2fc":"0.30011075247833","recovery_padj":"0.601388002005019","reciprocal_log2fc":"-0.272705791253518","reciprocal_shrunk_log2fc":"-0.255683676985067","reciprocal_padj":"0.402899515525031","exclude_pair_log2fc":"-0.306299534397961","exclude_pair_shrunk_log2fc":"-0.282592963826283","exclude_pair_padj":"0.509388988221042","five_traceable_log2fc":"-0.398710358175159","five_traceable_shrunk_log2fc":"-0.380682549594684","five_traceable_padj":"0.128681913747472","paper_counts_log2fc":"-0.393640633559536","paper_counts_shrunk_log2fc":"-0.381307306786626","paper_counts_padj":"0.0517905370961059","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma08_g04980 | 3 | 1 | RNA and ribosome biogenesis | GO:0005730 | nucleolus;GO:0032040 | small-subunit processome;GO:0042254 | ribosome biogenesis | 3 | Biological Process: mRNA splicing, via spliceosome (GO:0000398);; Biological Process: maturation of LSU-rRNA (GO:0000470);; Molecular Function: RNA binding (GO:0003723);; Biological Process: translation (GO:0006412);; Cellular Component: cytosolic large ribosomal subunit (GO:0022625);; Biological Process: maturation of SSU-rRNA (GO:0030490);; Cellular Component: box C/D snoRNP complex (GO:0031428);; Cellular Component: small-subunit processome (GO:0032040);; Cellular Component: U4/U6 x U5 tri-snRNP complex (GO:0046540);; Cellular Component: precatalytic spliceosome (GO:0071011);;  | H/ACA ribonucleoprotein complex subunit 2-like protein | unnamed protein product, partial [Vitis vinifera] | 0.375035285361624 | 0.30011075247833 | 0.601388002005019 | -0.272705791253518 | -0.255683676985067 | 0.402899515525031 | -0.306299534397961 | -0.282592963826283 | 0.509388988221042 | -0.398710358175159 | -0.380682549594684 | 0.128681913747472 | -0.393640633559536 | -0.381307306786626 | 0.0517905370961059 | True | True


record_id: DS057_R00032
dataset_id: DS057
record_json:
{"gene_id":"Ma08_g09760","robust_pathway_count":"3","robust_module_count":"1","modules":"RNA and ribosome biogenesis","pathways":"GO:0005730 | nucleolus;GO:0032040 | small-subunit processome;GO:0042254 | ribosome biogenesis","all_three_pathway_count":"3","GO_annotation":"Biological Process: rRNA modification (GO:0000154);; Cellular Component: plastid (GO:0009536);; Molecular Function: snoRNA binding (GO:0030515);; Cellular Component: box C/D snoRNP complex (GO:0031428);; Cellular Component: small-subunit processome (GO:0032040);; ","Swiss_Prot_annotation":"Probable nucleolar protein 5-2","NR_annotation":"PREDICTED: probable nucleolar protein 5-1 [Musa acuminata subsp. malaccensis]","recovery_log2fc":"0.513937748017413","recovery_shrunk_log2fc":"0.397261973894046","recovery_padj":"0.457194984573921","reciprocal_log2fc":"-0.537369173627484","reciprocal_shrunk_log2fc":"-0.506194024226235","reciprocal_padj":"0.0432044430666988","exclude_pair_log2fc":"-0.6273267302306","exclude_pair_shrunk_log2fc":"-0.569180584834059","exclude_pair_padj":"0.132296439455074","five_traceable_log2fc":"-0.614605418204958","five_traceable_shrunk_log2fc":"-0.581545960835412","five_traceable_padj":"0.0228528581208271","paper_counts_log2fc":"-0.741211021048163","paper_counts_shrunk_log2fc":"-0.71072064488235","paper_counts_padj":"0.0006932992456873","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma08_g09760 | 3 | 1 | RNA and ribosome biogenesis | GO:0005730 | nucleolus;GO:0032040 | small-subunit processome;GO:0042254 | ribosome biogenesis | 3 | Biological Process: rRNA modification (GO:0000154);; Cellular Component: plastid (GO:0009536);; Molecular Function: snoRNA binding (GO:0030515);; Cellular Component: box C/D snoRNP complex (GO:0031428);; Cellular Component: small-subunit processome (GO:0032040);;  | Probable nucleolar protein 5-2 | PREDICTED: probable nucleolar protein 5-1 [Musa acuminata subsp. malaccensis] | 0.513937748017413 | 0.397261973894046 | 0.457194984573921 | -0.537369173627484 | -0.506194024226235 | 0.0432044430666988 | -0.6273267302306 | -0.569180584834059 | 0.132296439455074 | -0.614605418204958 | -0.581545960835412 | 0.0228528581208271 | -0.741211021048163 | -0.71072064488235 | 0.0006932992456873 | True | True


record_id: DS057_R00033
dataset_id: DS057
record_json:
{"gene_id":"Ma08_g26040","robust_pathway_count":"3","robust_module_count":"1","modules":"RNA and ribosome biogenesis","pathways":"GO:0005730 | nucleolus;GO:0006364 | rRNA processing;GO:0042254 | ribosome biogenesis","all_three_pathway_count":"3","GO_annotation":"Molecular Function: RNA binding (GO:0003723);; Cellular Component: nucleolus (GO:0005730);; Cellular Component: viral nucleocapsid (GO:0019013);; Cellular Component: intracellular ribonucleoprotein complex (GO:0030529);; ","Swiss_Prot_annotation":"H/ACA ribonucleoprotein complex subunit 2-like protein","NR_annotation":"PREDICTED: H/ACA ribonucleoprotein complex subunit 2-like protein [Musa acuminata subsp. malaccensis]","recovery_log2fc":"0.301459372564074","recovery_shrunk_log2fc":"0.233196552301724","recovery_padj":"0.743573483556726","reciprocal_log2fc":"-0.522014389019196","reciprocal_shrunk_log2fc":"-0.497121402453245","reciprocal_padj":"0.026616743274304","exclude_pair_log2fc":"-0.560737806933986","exclude_pair_shrunk_log2fc":"-0.516704842929922","exclude_pair_padj":"0.143530159504912","five_traceable_log2fc":"-0.614476738057288","five_traceable_shrunk_log2fc":"-0.590699139211776","five_traceable_padj":"0.005343351239448","paper_counts_log2fc":"-0.551776337876314","paper_counts_shrunk_log2fc":"-0.544039660870062","paper_counts_padj":"6.78366685786097e-06","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma08_g26040 | 3 | 1 | RNA and ribosome biogenesis | GO:0005730 | nucleolus;GO:0006364 | rRNA processing;GO:0042254 | ribosome biogenesis | 3 | Molecular Function: RNA binding (GO:0003723);; Cellular Component: nucleolus (GO:0005730);; Cellular Component: viral nucleocapsid (GO:0019013);; Cellular Component: intracellular ribonucleoprotein complex (GO:0030529);;  | H/ACA ribonucleoprotein complex subunit 2-like protein | PREDICTED: H/ACA ribonucleoprotein complex subunit 2-like protein [Musa acuminata subsp. malaccensis] | 0.301459372564074 | 0.233196552301724 | 0.743573483556726 | -0.522014389019196 | -0.497121402453245 | 0.026616743274304 | -0.560737806933986 | -0.516704842929922 | 0.143530159504912 | -0.614476738057288 | -0.590699139211776 | 0.005343351239448 | -0.551776337876314 | -0.544039660870062 | 6.78366685786097e-06 | True | True


record_id: DS057_R00034
dataset_id: DS057
record_json:
{"gene_id":"Ma09_g04060","robust_pathway_count":"3","robust_module_count":"1","modules":"Cell cycle and microtubules","pathways":"GO:0003777 | microtubule motor activity;GO:0007018 | microtubule-based movement;GO:0008017 | microtubule binding","all_three_pathway_count":"3","GO_annotation":"Molecular Function: ATP binding (GO:0005524);; Cellular Component: kinesin complex (GO:0005871);; Biological Process: microtubule-based movement (GO:0007018);; Molecular Function: microtubule binding (GO:0008017);; Molecular Function: ATP-dependent microtubule motor activity, plus-end-directed (GO:0008574);; ","Swiss_Prot_annotation":"Kinesin-like protein KIN-5A","NR_annotation":"PREDICTED: kinesin-like protein KIN-5A [Musa acuminata subsp. malaccensis]","recovery_log2fc":"0.780236518585081","recovery_shrunk_log2fc":"0.683426654310771","recovery_padj":"0.0134229363322445","reciprocal_log2fc":"-0.4208622880104","reciprocal_shrunk_log2fc":"-0.393840280577533","reciprocal_padj":"0.161842063861719","exclude_pair_log2fc":"-0.314993037783233","exclude_pair_shrunk_log2fc":"-0.286879431981223","exclude_pair_padj":"0.536689435609126","five_traceable_log2fc":"-0.291098676491502","five_traceable_shrunk_log2fc":"-0.276049495195277","five_traceable_padj":"0.336117220073399","paper_counts_log2fc":"-0.355963716803381","paper_counts_shrunk_log2fc":"-0.344779369451998","paper_counts_padj":"0.0834701380131521","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma09_g04060 | 3 | 1 | Cell cycle and microtubules | GO:0003777 | microtubule motor activity;GO:0007018 | microtubule-based movement;GO:0008017 | microtubule binding | 3 | Molecular Function: ATP binding (GO:0005524);; Cellular Component: kinesin complex (GO:0005871);; Biological Process: microtubule-based movement (GO:0007018);; Molecular Function: microtubule binding (GO:0008017);; Molecular Function: ATP-dependent microtubule motor activity, plus-end-directed (GO:0008574);;  | Kinesin-like protein KIN-5A | PREDICTED: kinesin-like protein KIN-5A [Musa acuminata subsp. malaccensis] | 0.780236518585081 | 0.683426654310771 | 0.0134229363322445 | -0.4208622880104 | -0.393840280577533 | 0.161842063861719 | -0.314993037783233 | -0.286879431981223 | 0.536689435609126 | -0.291098676491502 | -0.276049495195277 | 0.336117220073399 | -0.355963716803381 | -0.344779369451998 | 0.0834701380131521 | True | True


record_id: DS057_R00035
dataset_id: DS057
record_json:
{"gene_id":"Ma09_g06690","robust_pathway_count":"3","robust_module_count":"1","modules":"RNA and ribosome biogenesis","pathways":"GO:0005730 | nucleolus;GO:0006364 | rRNA processing;GO:0042254 | ribosome biogenesis","all_three_pathway_count":"3","GO_annotation":"Biological Process: enzyme-directed rRNA 2'-O-methylation (GO:0000453);; Biological Process: maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (GO:0000463);; Biological Process: maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (GO:0000466);; Cellular Component: nucleolus (GO:0005730);; Molecular Function: rRNA (uridine-2'-O-)-methyltransferase activity (GO:0008650);; Molecular Function: rRNA (guanine) methyltransferase activity (GO:0016435);; Cellular Component: preribosome, large subunit precursor (GO:0030687);; ","Swiss_Prot_annotation":"--","NR_annotation":"PREDICTED: putative rRNA methyltransferase [Musa acuminata subsp. malaccensis]","recovery_log2fc":"0.427796564603315","recovery_shrunk_log2fc":"0.331220023782654","recovery_padj":"0.569342043289148","reciprocal_log2fc":"-0.199929119897501","reciprocal_shrunk_log2fc":"-0.194254425615522","reciprocal_padj":"0.342880439313951","exclude_pair_log2fc":"-0.216576165805236","exclude_pair_shrunk_log2fc":"-0.201383691184128","exclude_pair_padj":"0.653156702366008","five_traceable_log2fc":"-0.201919069530106","five_traceable_shrunk_log2fc":"-0.195695244295708","five_traceable_padj":"0.391193066490874","paper_counts_log2fc":"-0.266004247357054","paper_counts_shrunk_log2fc":"-0.258863748786751","paper_counts_padj":"0.173045715882324","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma09_g06690 | 3 | 1 | RNA and ribosome biogenesis | GO:0005730 | nucleolus;GO:0006364 | rRNA processing;GO:0042254 | ribosome biogenesis | 3 | Biological Process: enzyme-directed rRNA 2'-O-methylation (GO:0000453);; Biological Process: maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (GO:0000463);; Biological Process: maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (GO:0000466);; Cellular Component: nucleolus (GO:0005730);; Molecular Function: rRNA (uridine-2'-O-)-methyltransferase activity (GO:0008650);; Molecular Function: rRNA (guanine) methyltransferase activity (GO:0016435);; Cellular Component: preribosome, large subunit precursor (GO:0030687);;  | -- | PREDICTED: putative rRNA methyltransferase [Musa acuminata subsp. malaccensis] | 0.427796564603315 | 0.331220023782654 | 0.569342043289148 | -0.199929119897501 | -0.194254425615522 | 0.342880439313951 | -0.216576165805236 | -0.201383691184128 | 0.653156702366008 | -0.201919069530106 | -0.195695244295708 | 0.391193066490874 | -0.266004247357054 | -0.258863748786751 | 0.173045715882324 | True | True


record_id: DS057_R00036
dataset_id: DS057
record_json:
{"gene_id":"Ma09_g07050","robust_pathway_count":"3","robust_module_count":"1","modules":"Cell cycle and microtubules","pathways":"GO:0003777 | microtubule motor activity;GO:0005874 | microtubule;GO:0007018 | microtubule-based movement","all_three_pathway_count":"3","GO_annotation":"Molecular Function: nucleotide binding (GO:0000166);; ","Swiss_Prot_annotation":"Kinesin-like protein KIN-12B","NR_annotation":"PREDICTED: kinesin-like protein KIN-12B [Musa acuminata subsp. malaccensis]","recovery_log2fc":"0.292252528310236","recovery_shrunk_log2fc":"0.233865008988871","recovery_padj":"0.72612212686815","reciprocal_log2fc":"-0.799599408577177","reciprocal_shrunk_log2fc":"-0.744835826144781","reciprocal_padj":"0.0033052860311293","exclude_pair_log2fc":"-0.921234854450987","exclude_pair_shrunk_log2fc":"-0.825975653820694","exclude_pair_padj":"0.0219523454171111","five_traceable_log2fc":"-0.835032264287842","five_traceable_shrunk_log2fc":"-0.777270381113182","five_traceable_padj":"0.0053827687679448","paper_counts_log2fc":"-0.756836417060635","paper_counts_shrunk_log2fc":"-0.72949079570054","paper_counts_padj":"0.0001838248550812","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma09_g07050 | 3 | 1 | Cell cycle and microtubules | GO:0003777 | microtubule motor activity;GO:0005874 | microtubule;GO:0007018 | microtubule-based movement | 3 | Molecular Function: nucleotide binding (GO:0000166);;  | Kinesin-like protein KIN-12B | PREDICTED: kinesin-like protein KIN-12B [Musa acuminata subsp. malaccensis] | 0.292252528310236 | 0.233865008988871 | 0.72612212686815 | -0.799599408577177 | -0.744835826144781 | 0.0033052860311293 | -0.921234854450987 | -0.825975653820694 | 0.0219523454171111 | -0.835032264287842 | -0.777270381113182 | 0.0053827687679448 | -0.756836417060635 | -0.72949079570054 | 0.0001838248550812 | True | True


record_id: DS057_R00037
dataset_id: DS057
record_json:
{"gene_id":"Ma09_g15720","robust_pathway_count":"3","robust_module_count":"1","modules":"RNA and ribosome biogenesis","pathways":"GO:0005730 | nucleolus;GO:0006364 | rRNA processing;GO:0032040 | small-subunit processome","all_three_pathway_count":"3","GO_annotation":"Cellular Component: nucleolus (GO:0005730);; Biological Process: maturation of SSU-rRNA (GO:0030490);; Cellular Component: small-subunit processome (GO:0032040);; ","Swiss_Prot_annotation":"--","NR_annotation":"PREDICTED: uncharacterized protein C57A7.06 [Musa acuminata subsp. malaccensis]","recovery_log2fc":"0.317412275225708","recovery_shrunk_log2fc":"0.239684080596703","recovery_padj":"0.743442484346916","reciprocal_log2fc":"-0.424232627642123","reciprocal_shrunk_log2fc":"-0.397333061553266","reciprocal_padj":"0.154191434460036","exclude_pair_log2fc":"-0.560065354757686","exclude_pair_shrunk_log2fc":"-0.505766221392328","exclude_pair_padj":"0.210395792560775","five_traceable_log2fc":"-0.505192752953395","five_traceable_shrunk_log2fc":"-0.475494868142471","five_traceable_padj":"0.0879999520970943","paper_counts_log2fc":"-0.554562378257254","paper_counts_shrunk_log2fc":"-0.528085376448452","paper_counts_padj":"0.0250985492043348","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma09_g15720 | 3 | 1 | RNA and ribosome biogenesis | GO:0005730 | nucleolus;GO:0006364 | rRNA processing;GO:0032040 | small-subunit processome | 3 | Cellular Component: nucleolus (GO:0005730);; Biological Process: maturation of SSU-rRNA (GO:0030490);; Cellular Component: small-subunit processome (GO:0032040);;  | -- | PREDICTED: uncharacterized protein C57A7.06 [Musa acuminata subsp. malaccensis] | 0.317412275225708 | 0.239684080596703 | 0.743442484346916 | -0.424232627642123 | -0.397333061553266 | 0.154191434460036 | -0.560065354757686 | -0.505766221392328 | 0.210395792560775 | -0.505192752953395 | -0.475494868142471 | 0.0879999520970943 | -0.554562378257254 | -0.528085376448452 | 0.0250985492043348 | True | True


record_id: DS057_R00038
dataset_id: DS057
record_json:
{"gene_id":"Ma09_g27130","robust_pathway_count":"3","robust_module_count":"1","modules":"Cell cycle and microtubules","pathways":"GO:0003777 | microtubule motor activity;GO:0005874 | microtubule;GO:0007018 | microtubule-based movement","all_three_pathway_count":"3","GO_annotation":"Molecular Function: binding (GO:0005488);; ","Swiss_Prot_annotation":"Kinesin-like protein KIN-12F","NR_annotation":"PREDICTED: kinesin-like protein KIN-12F [Musa acuminata subsp. malaccensis]","recovery_log2fc":"0.822156125128766","recovery_shrunk_log2fc":"0.288072984402704","recovery_padj":"0.712159664524345","reciprocal_log2fc":"-0.934397233691494","reciprocal_shrunk_log2fc":"-0.885551112663047","reciprocal_padj":"2.98180548801716e-05","exclude_pair_log2fc":"-0.913951414799831","exclude_pair_shrunk_log2fc":"-0.827472822909154","exclude_pair_padj":"0.0156171366760498","five_traceable_log2fc":"-0.889617276339446","five_traceable_shrunk_log2fc":"-0.842802811093616","five_traceable_padj":"0.0003976083688366","paper_counts_log2fc":"-0.816143944770415","paper_counts_shrunk_log2fc":"-0.798097069817333","paper_counts_padj":"8.67016039404651e-08","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma09_g27130 | 3 | 1 | Cell cycle and microtubules | GO:0003777 | microtubule motor activity;GO:0005874 | microtubule;GO:0007018 | microtubule-based movement | 3 | Molecular Function: binding (GO:0005488);;  | Kinesin-like protein KIN-12F | PREDICTED: kinesin-like protein KIN-12F [Musa acuminata subsp. malaccensis] | 0.822156125128766 | 0.288072984402704 | 0.712159664524345 | -0.934397233691494 | -0.885551112663047 | 2.98180548801716e-05 | -0.913951414799831 | -0.827472822909154 | 0.0156171366760498 | -0.889617276339446 | -0.842802811093616 | 0.0003976083688366 | -0.816143944770415 | -0.798097069817333 | 8.67016039404651e-08 | True | True


record_id: DS057_R00039
dataset_id: DS057
record_json:
{"gene_id":"Ma10_g09480","robust_pathway_count":"3","robust_module_count":"1","modules":"RNA and ribosome biogenesis","pathways":"GO:0005730 | nucleolus;GO:0006364 | rRNA processing;GO:0032040 | small-subunit processome","all_three_pathway_count":"3","GO_annotation":"Biological Process: rRNA processing (GO:0006364);; Molecular Function: snoRNA binding (GO:0030515);; Cellular Component: small-subunit processome (GO:0032040);; ","Swiss_Prot_annotation":"U3 snoRNP-associated protein-like YAOH","NR_annotation":"PREDICTED: U3 snoRNP-associated protein-like YAOH [Musa acuminata subsp. malaccensis]","recovery_log2fc":"0.945181781075111","recovery_shrunk_log2fc":"0.532972085991854","recovery_padj":"0.365571163831644","reciprocal_log2fc":"-0.425105464166738","reciprocal_shrunk_log2fc":"-0.402929994522641","reciprocal_padj":"0.104397381453362","exclude_pair_log2fc":"-0.565589424912992","exclude_pair_shrunk_log2fc":"-0.520407825308386","exclude_pair_padj":"0.143935100693337","five_traceable_log2fc":"-0.544277518285509","five_traceable_shrunk_log2fc":"-0.525496841836308","five_traceable_padj":"0.0095005150955065","paper_counts_log2fc":"-0.504133417785172","paper_counts_shrunk_log2fc":"-0.496768260018579","paper_counts_padj":"6.77010223561213e-05","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma10_g09480 | 3 | 1 | RNA and ribosome biogenesis | GO:0005730 | nucleolus;GO:0006364 | rRNA processing;GO:0032040 | small-subunit processome | 3 | Biological Process: rRNA processing (GO:0006364);; Molecular Function: snoRNA binding (GO:0030515);; Cellular Component: small-subunit processome (GO:0032040);;  | U3 snoRNP-associated protein-like YAOH | PREDICTED: U3 snoRNP-associated protein-like YAOH [Musa acuminata subsp. malaccensis] | 0.945181781075111 | 0.532972085991854 | 0.365571163831644 | -0.425105464166738 | -0.402929994522641 | 0.104397381453362 | -0.565589424912992 | -0.520407825308386 | 0.143935100693337 | -0.544277518285509 | -0.525496841836308 | 0.0095005150955065 | -0.504133417785172 | -0.496768260018579 | 6.77010223561213e-05 | True | True


record_id: DS057_R00040
dataset_id: DS057
record_json:
{"gene_id":"Ma02_g15750","robust_pathway_count":"2","robust_module_count":"1","modules":"RNA and ribosome biogenesis","pathways":"GO:0005730 | nucleolus;GO:0006364 | rRNA processing","all_three_pathway_count":"2","GO_annotation":"Biological Process: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (GO:0000462);; Molecular Function: snoRNA binding (GO:0030515);; Cellular Component: small-subunit processome (GO:0032040);; Cellular Component: Pwp2p-containing subcomplex of 90S preribosome (GO:0034388);; ","Swiss_Prot_annotation":"--","NR_annotation":"PREDICTED: U3 small nucleolar RNA-associated protein 6 homolog [Musa acuminata subsp. malaccensis]","recovery_log2fc":"0.866735017377758","recovery_shrunk_log2fc":"0.513084129836108","recovery_padj":"0.387841881785788","reciprocal_log2fc":"-0.27060476253257","reciprocal_shrunk_log2fc":"-0.254255317090054","reciprocal_padj":"0.396616024891983","exclude_pair_log2fc":"-0.262670101985908","exclude_pair_shrunk_log2fc":"-0.232888824350427","exclude_pair_padj":"0.679243926500127","five_traceable_log2fc":"-0.289123004381702","five_traceable_shrunk_log2fc":"-0.270894868584702","five_traceable_padj":"0.399994872341128","paper_counts_log2fc":"-0.282121304300594","paper_counts_shrunk_log2fc":"-0.276305161522121","paper_counts_padj":"0.0892760786716672","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma02_g15750 | 2 | 1 | RNA and ribosome biogenesis | GO:0005730 | nucleolus;GO:0006364 | rRNA processing | 2 | Biological Process: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (GO:0000462);; Molecular Function: snoRNA binding (GO:0030515);; Cellular Component: small-subunit processome (GO:0032040);; Cellular Component: Pwp2p-containing subcomplex of 90S preribosome (GO:0034388);;  | -- | PREDICTED: U3 small nucleolar RNA-associated protein 6 homolog [Musa acuminata subsp. malaccensis] | 0.866735017377758 | 0.513084129836108 | 0.387841881785788 | -0.27060476253257 | -0.254255317090054 | 0.396616024891983 | -0.262670101985908 | -0.232888824350427 | 0.679243926500127 | -0.289123004381702 | -0.270894868584702 | 0.399994872341128 | -0.282121304300594 | -0.276305161522121 | 0.0892760786716672 | True | True


record_id: DS057_R00041
dataset_id: DS057
record_json:
{"gene_id":"Ma02_g16670","robust_pathway_count":"2","robust_module_count":"1","modules":"RNA and ribosome biogenesis","pathways":"GO:0001522 | pseudouridine synthesis;GO:0008033 | tRNA processing","all_three_pathway_count":"2","GO_annotation":"Biological Process: RNA metabolic process (GO:0016070);; ","Swiss_Prot_annotation":"--","NR_annotation":"PREDICTED: tRNA pseudouridine(38/39) synthase isoform X1 [Musa acuminata subsp. malaccensis]","recovery_log2fc":"1.6996033018163","recovery_shrunk_log2fc":"0.350635936058554","recovery_padj":"0.50134810333814","reciprocal_log2fc":"-0.639430328366764","reciprocal_shrunk_log2fc":"-0.576068814904342","reciprocal_padj":"0.0793029614475633","exclude_pair_log2fc":"-0.8682229874515","exclude_pair_shrunk_log2fc":"-0.793318091005086","exclude_pair_padj":"0.0157248451322062","five_traceable_log2fc":"-0.860923136770972","five_traceable_shrunk_log2fc":"-0.827832622971145","five_traceable_padj":"3.89866276029528e-05","paper_counts_log2fc":"-0.7512802299127","paper_counts_shrunk_log2fc":"-0.724316397600685","paper_counts_padj":"0.0001962158957728","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma02_g16670 | 2 | 1 | RNA and ribosome biogenesis | GO:0001522 | pseudouridine synthesis;GO:0008033 | tRNA processing | 2 | Biological Process: RNA metabolic process (GO:0016070);;  | -- | PREDICTED: tRNA pseudouridine(38/39) synthase isoform X1 [Musa acuminata subsp. malaccensis] | 1.6996033018163 | 0.350635936058554 | 0.50134810333814 | -0.639430328366764 | -0.576068814904342 | 0.0793029614475633 | -0.8682229874515 | -0.793318091005086 | 0.0157248451322062 | -0.860923136770972 | -0.827832622971145 | 3.89866276029528e-05 | -0.7512802299127 | -0.724316397600685 | 0.0001962158957728 | True | True


record_id: DS057_R00042
dataset_id: DS057
record_json:
{"gene_id":"Ma03_g02640","robust_pathway_count":"2","robust_module_count":"1","modules":"Lipid-ethylene metabolism","pathways":"GO:0006631 | fatty acid metabolic process;GO:0006633 | fatty acid biosynthetic process","all_three_pathway_count":"2","GO_annotation":"Molecular Function: FMN binding (GO:0010181);; Molecular Function: oxidoreductase activity (GO:0016491);; Biological Process: oxidation-reduction process (GO:0055114);; ","Swiss_Prot_annotation":"Putative 12-oxophytodienoate reductase 11","NR_annotation":"PREDICTED: putative 12-oxophytodienoate reductase 11 [Musa acuminata subsp. malaccensis]","recovery_log2fc":"-1.36779448872901","recovery_shrunk_log2fc":"-0.767617584156898","recovery_padj":"0.105830567701301","reciprocal_log2fc":"1.15958420581319","reciprocal_shrunk_log2fc":"1.10690341960033","reciprocal_padj":"5.3462192649397305e-09","exclude_pair_log2fc":"1.25953215450983","exclude_pair_shrunk_log2fc":"1.14910716034583","exclude_pair_padj":"0.000155296293865","five_traceable_log2fc":"1.23986557394606","five_traceable_shrunk_log2fc":"1.18914609596319","five_traceable_padj":"2.2337692827818803e-09","paper_counts_log2fc":"1.7656073396341","paper_counts_shrunk_log2fc":"1.71995759957853","paper_counts_padj":"7.833786922863969e-29","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma03_g02640 | 2 | 1 | Lipid-ethylene metabolism | GO:0006631 | fatty acid metabolic process;GO:0006633 | fatty acid biosynthetic process | 2 | Molecular Function: FMN binding (GO:0010181);; Molecular Function: oxidoreductase activity (GO:0016491);; Biological Process: oxidation-reduction process (GO:0055114);;  | Putative 12-oxophytodienoate reductase 11 | PREDICTED: putative 12-oxophytodienoate reductase 11 [Musa acuminata subsp. malaccensis] | -1.36779448872901 | -0.767617584156898 | 0.105830567701301 | 1.15958420581319 | 1.10690341960033 | 5.3462192649397305e-09 | 1.25953215450983 | 1.14910716034583 | 0.000155296293865 | 1.23986557394606 | 1.18914609596319 | 2.2337692827818803e-09 | 1.7656073396341 | 1.71995759957853 | 7.833786922863969e-29 | True | True


record_id: DS057_R00043
dataset_id: DS057
record_json:
{"gene_id":"Ma03_g33680","robust_pathway_count":"2","robust_module_count":"1","modules":"RNA and ribosome biogenesis","pathways":"GO:0005730 | nucleolus;GO:0006364 | rRNA processing","all_three_pathway_count":"2","GO_annotation":"--","Swiss_Prot_annotation":"Polynucleotide 5&apos;-hydroxyl-kinase NOL9","NR_annotation":"PREDICTED: polynucleotide 5&apos;-hydroxyl-kinase NOL9-like isoform X3 [Musa acuminata subsp. malaccensis]","recovery_log2fc":"1.24432822662859","recovery_shrunk_log2fc":"0.219971213089366","recovery_padj":"0.72753866838813","reciprocal_log2fc":"-0.385508804763607","reciprocal_shrunk_log2fc":"-0.34816148219372","reciprocal_padj":"0.339026828867052","exclude_pair_log2fc":"-0.54313857610206","exclude_pair_shrunk_log2fc":"-0.48014599479059","exclude_pair_padj":"0.294588881760659","five_traceable_log2fc":"-0.569038730306624","five_traceable_shrunk_log2fc":"-0.534595328171205","five_traceable_padj":"0.0535644744277784","paper_counts_log2fc":"-0.990331447430399","paper_counts_shrunk_log2fc":"-0.891053118171358","paper_counts_padj":"0.0059607355032744","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma03_g33680 | 2 | 1 | RNA and ribosome biogenesis | GO:0005730 | nucleolus;GO:0006364 | rRNA processing | 2 | -- | Polynucleotide 5&apos;-hydroxyl-kinase NOL9 | PREDICTED: polynucleotide 5&apos;-hydroxyl-kinase NOL9-like isoform X3 [Musa acuminata subsp. malaccensis] | 1.24432822662859 | 0.219971213089366 | 0.72753866838813 | -0.385508804763607 | -0.34816148219372 | 0.339026828867052 | -0.54313857610206 | -0.48014599479059 | 0.294588881760659 | -0.569038730306624 | -0.534595328171205 | 0.0535644744277784 | -0.990331447430399 | -0.891053118171358 | 0.0059607355032744 | True | True


record_id: DS057_R00044
dataset_id: DS057
record_json:
{"gene_id":"Ma04_g26410","robust_pathway_count":"2","robust_module_count":"1","modules":"Cell cycle and microtubules","pathways":"GO:0000278 | mitotic cell cycle;GO:0005874 | microtubule","all_three_pathway_count":"2","GO_annotation":"--","Swiss_Prot_annotation":"Gamma-tubulin complex component 3","NR_annotation":"PREDICTED: gamma-tubulin complex component 5 isoform X4 [Musa acuminata subsp. malaccensis]","recovery_log2fc":"0.805737005690262","recovery_shrunk_log2fc":"0.314954572835659","recovery_padj":"0.680892813245417","reciprocal_log2fc":"-0.552626716342992","reciprocal_shrunk_log2fc":"-0.514184321437218","reciprocal_padj":"0.0627674296653331","exclude_pair_log2fc":"-0.721657827648032","exclude_pair_shrunk_log2fc":"-0.659529862813719","exclude_pair_padj":"0.0565702614825966","five_traceable_log2fc":"-0.701171979737021","five_traceable_shrunk_log2fc":"-0.669099230058059","five_traceable_padj":"0.003349376666648","paper_counts_log2fc":"-0.714003737922199","paper_counts_shrunk_log2fc":"-0.699469207328569","paper_counts_padj":"1.25037757881616e-06","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma04_g26410 | 2 | 1 | Cell cycle and microtubules | GO:0000278 | mitotic cell cycle;GO:0005874 | microtubule | 2 | -- | Gamma-tubulin complex component 3 | PREDICTED: gamma-tubulin complex component 5 isoform X4 [Musa acuminata subsp. malaccensis] | 0.805737005690262 | 0.314954572835659 | 0.680892813245417 | -0.552626716342992 | -0.514184321437218 | 0.0627674296653331 | -0.721657827648032 | -0.659529862813719 | 0.0565702614825966 | -0.701171979737021 | -0.669099230058059 | 0.003349376666648 | -0.714003737922199 | -0.699469207328569 | 1.25037757881616e-06 | True | True


record_id: DS057_R00045
dataset_id: DS057
record_json:
{"gene_id":"Ma04_g33440","robust_pathway_count":"2","robust_module_count":"1","modules":"Cell cycle and microtubules","pathways":"GO:0000278 | mitotic cell cycle;GO:0008017 | microtubule binding","all_three_pathway_count":"2","GO_annotation":"Biological Process: chromosome segregation (GO:0007059);; Molecular Function: microtubule binding (GO:0008017);; Biological Process: cell division (GO:0051301);; ","Swiss_Prot_annotation":"Spindle and kinetochore-associated protein 1 homolog","NR_annotation":"PREDICTED: spindle and kinetochore-associated protein 1 homolog [Musa acuminata subsp. malaccensis] ","recovery_log2fc":"0.701490580752733","recovery_shrunk_log2fc":"0.46182647444244","recovery_padj":"0.441106602715362","reciprocal_log2fc":"-0.890801164653606","reciprocal_shrunk_log2fc":"-0.819485314038138","reciprocal_padj":"0.0025094855895688","exclude_pair_log2fc":"-1.09205690937795","exclude_pair_shrunk_log2fc":"-0.990992219901955","exclude_pair_padj":"0.0021591995522422","five_traceable_log2fc":"-1.06563347296105","five_traceable_shrunk_log2fc":"-1.0198252629438","five_traceable_padj":"9.86977552560482e-07","paper_counts_log2fc":"-1.39768864824335","paper_counts_shrunk_log2fc":"-1.37738932082117","paper_counts_padj":"1.84187777902077e-32","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma04_g33440 | 2 | 1 | Cell cycle and microtubules | GO:0000278 | mitotic cell cycle;GO:0008017 | microtubule binding | 2 | Biological Process: chromosome segregation (GO:0007059);; Molecular Function: microtubule binding (GO:0008017);; Biological Process: cell division (GO:0051301);;  | Spindle and kinetochore-associated protein 1 homolog | PREDICTED: spindle and kinetochore-associated protein 1 homolog [Musa acuminata subsp. malaccensis]  | 0.701490580752733 | 0.46182647444244 | 0.441106602715362 | -0.890801164653606 | -0.819485314038138 | 0.0025094855895688 | -1.09205690937795 | -0.990992219901955 | 0.0021591995522422 | -1.06563347296105 | -1.0198252629438 | 9.86977552560482e-07 | -1.39768864824335 | -1.37738932082117 | 1.84187777902077e-32 | True | True


record_id: DS057_R00046
dataset_id: DS057
record_json:
{"gene_id":"Ma04_g36480","robust_pathway_count":"2","robust_module_count":"1","modules":"Cell cycle and microtubules","pathways":"GO:0005874 | microtubule;GO:0008017 | microtubule binding","all_three_pathway_count":"2","GO_annotation":"Cellular Component: cell wall (GO:0005618);; Cellular Component: nucleolus (GO:0005730);; Cellular Component: spindle (GO:0005819);; Molecular Function: microtubule binding (GO:0008017);; Cellular Component: phragmoplast (GO:0009524);; Biological Process: thigmotropism (GO:0009652);; ","Swiss_Prot_annotation":"Microtubule-associated protein RP/EB family member 1C","NR_annotation":"PREDICTED: microtubule-associated protein RP/EB family member 1C-like [Musa acuminata subsp. malaccensis]","recovery_log2fc":"0.873292633792043","recovery_shrunk_log2fc":"0.781617904312631","recovery_padj":"0.0010352359309258","reciprocal_log2fc":"-0.542381142734876","reciprocal_shrunk_log2fc":"-0.512727419682436","reciprocal_padj":"0.033320402638939","exclude_pair_log2fc":"-0.569458588955014","exclude_pair_shrunk_log2fc":"-0.513342425401646","exclude_pair_padj":"0.20580720266873","five_traceable_log2fc":"-0.529142700205717","five_traceable_shrunk_log2fc":"-0.499022813825457","five_traceable_padj":"0.0657640172413718","paper_counts_log2fc":"-0.546746969712546","paper_counts_shrunk_log2fc":"-0.527812070381272","paper_counts_padj":"0.0076684835961241","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma04_g36480 | 2 | 1 | Cell cycle and microtubules | GO:0005874 | microtubule;GO:0008017 | microtubule binding | 2 | Cellular Component: cell wall (GO:0005618);; Cellular Component: nucleolus (GO:0005730);; Cellular Component: spindle (GO:0005819);; Molecular Function: microtubule binding (GO:0008017);; Cellular Component: phragmoplast (GO:0009524);; Biological Process: thigmotropism (GO:0009652);;  | Microtubule-associated protein RP/EB family member 1C | PREDICTED: microtubule-associated protein RP/EB family member 1C-like [Musa acuminata subsp. malaccensis] | 0.873292633792043 | 0.781617904312631 | 0.0010352359309258 | -0.542381142734876 | -0.512727419682436 | 0.033320402638939 | -0.569458588955014 | -0.513342425401646 | 0.20580720266873 | -0.529142700205717 | -0.499022813825457 | 0.0657640172413718 | -0.546746969712546 | -0.527812070381272 | 0.0076684835961241 | True | True


record_id: DS057_R00047
dataset_id: DS057
record_json:
{"gene_id":"Ma05_g02860","robust_pathway_count":"2","robust_module_count":"1","modules":"RNA and ribosome biogenesis","pathways":"GO:0005730 | nucleolus;GO:0032040 | small-subunit processome","all_three_pathway_count":"2","GO_annotation":"--","Swiss_Prot_annotation":"--","NR_annotation":"PREDICTED: small subunit processome component 20 homolog isoform X1 [Musa acuminata subsp. malaccensis]","recovery_log2fc":"2.23432589836579","recovery_shrunk_log2fc":"1.0158741421148","recovery_padj":"0.0132257372144821","reciprocal_log2fc":"-0.450465237941608","reciprocal_shrunk_log2fc":"-0.411350655180053","reciprocal_padj":"0.212559036128081","exclude_pair_log2fc":"-0.566082968813258","exclude_pair_shrunk_log2fc":"-0.496451260172943","exclude_pair_padj":"0.289262963149076","five_traceable_log2fc":"-0.527605517730084","five_traceable_shrunk_log2fc":"-0.483519299238623","five_traceable_padj":"0.151301384008577","paper_counts_log2fc":"-0.551705432667046","paper_counts_shrunk_log2fc":"-0.539450840309238","paper_counts_padj":"0.0005062266711204","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma05_g02860 | 2 | 1 | RNA and ribosome biogenesis | GO:0005730 | nucleolus;GO:0032040 | small-subunit processome | 2 | -- | -- | PREDICTED: small subunit processome component 20 homolog isoform X1 [Musa acuminata subsp. malaccensis] | 2.23432589836579 | 1.0158741421148 | 0.0132257372144821 | -0.450465237941608 | -0.411350655180053 | 0.212559036128081 | -0.566082968813258 | -0.496451260172943 | 0.289262963149076 | -0.527605517730084 | -0.483519299238623 | 0.151301384008577 | -0.551705432667046 | -0.539450840309238 | 0.0005062266711204 | True | True


record_id: DS057_R00048
dataset_id: DS057
record_json:
{"gene_id":"Ma05_g17550","robust_pathway_count":"2","robust_module_count":"1","modules":"RNA and ribosome biogenesis","pathways":"GO:0005730 | nucleolus;GO:0042254 | ribosome biogenesis","all_three_pathway_count":"2","GO_annotation":"--","Swiss_Prot_annotation":"--","NR_annotation":"PREDICTED: uncharacterized protein LOC103974129 [Musa acuminata subsp. malaccensis]","recovery_log2fc":"1.86488672804419","recovery_shrunk_log2fc":"0.323479230998917","recovery_padj":"0.513848604978855","reciprocal_log2fc":"-0.660420320959693","reciprocal_shrunk_log2fc":"-0.596049510050163","reciprocal_padj":"0.0646793417391243","exclude_pair_log2fc":"-0.811764090799582","exclude_pair_shrunk_log2fc":"-0.705398099048351","exclude_pair_padj":"0.101304438399442","five_traceable_log2fc":"-0.734533207146499","five_traceable_shrunk_log2fc":"-0.665146397305868","five_traceable_padj":"0.0498976945204049","paper_counts_log2fc":"-0.758166643320239","paper_counts_shrunk_log2fc":"-0.733791614487669","paper_counts_padj":"6.19475765593091e-05","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma05_g17550 | 2 | 1 | RNA and ribosome biogenesis | GO:0005730 | nucleolus;GO:0042254 | ribosome biogenesis | 2 | -- | -- | PREDICTED: uncharacterized protein LOC103974129 [Musa acuminata subsp. malaccensis] | 1.86488672804419 | 0.323479230998917 | 0.513848604978855 | -0.660420320959693 | -0.596049510050163 | 0.0646793417391243 | -0.811764090799582 | -0.705398099048351 | 0.101304438399442 | -0.734533207146499 | -0.665146397305868 | 0.0498976945204049 | -0.758166643320239 | -0.733791614487669 | 6.19475765593091e-05 | True | True


record_id: DS057_R00049
dataset_id: DS057
record_json:
{"gene_id":"Ma05_g22060","robust_pathway_count":"2","robust_module_count":"1","modules":"RNA and ribosome biogenesis","pathways":"GO:0001522 | pseudouridine synthesis;GO:0006364 | rRNA processing","all_three_pathway_count":"2","GO_annotation":"Biological Process: enzyme-directed rRNA pseudouridine synthesis (GO:0000455);; Molecular Function: RNA binding (GO:0003723);; Cellular Component: cytosol (GO:0005829);; Cellular Component: amyloplast (GO:0009501);; Cellular Component: chloroplast (GO:0009507);; Molecular Function: pseudouridine synthase activity (GO:0009982);; ","Swiss_Prot_annotation":"Putative ribosomal large subunit pseudouridine synthase SVR1, chloroplastic","NR_annotation":"PREDICTED: uncharacterized protein LOC103985738 isoform X1 [Musa acuminata subsp. malaccensis]","recovery_log2fc":"1.94734418961014","recovery_shrunk_log2fc":"0.310806843250995","recovery_padj":"0.515122922713951","reciprocal_log2fc":"-0.335566054402526","reciprocal_shrunk_log2fc":"-0.317747007297412","reciprocal_padj":"0.230063523650482","exclude_pair_log2fc":"-0.269239209904369","exclude_pair_shrunk_log2fc":"-0.239286300483925","exclude_pair_padj":"0.666645745243481","five_traceable_log2fc":"-0.276743757043817","five_traceable_shrunk_log2fc":"-0.262088645943746","five_traceable_padj":"0.372292597912883","paper_counts_log2fc":"-0.218335867008717","paper_counts_shrunk_log2fc":"-0.203831121956583","paper_counts_padj":"0.530246596543604","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma05_g22060 | 2 | 1 | RNA and ribosome biogenesis | GO:0001522 | pseudouridine synthesis;GO:0006364 | rRNA processing | 2 | Biological Process: enzyme-directed rRNA pseudouridine synthesis (GO:0000455);; Molecular Function: RNA binding (GO:0003723);; Cellular Component: cytosol (GO:0005829);; Cellular Component: amyloplast (GO:0009501);; Cellular Component: chloroplast (GO:0009507);; Molecular Function: pseudouridine synthase activity (GO:0009982);;  | Putative ribosomal large subunit pseudouridine synthase SVR1, chloroplastic | PREDICTED: uncharacterized protein LOC103985738 isoform X1 [Musa acuminata subsp. malaccensis] | 1.94734418961014 | 0.310806843250995 | 0.515122922713951 | -0.335566054402526 | -0.317747007297412 | 0.230063523650482 | -0.269239209904369 | -0.239286300483925 | 0.666645745243481 | -0.276743757043817 | -0.262088645943746 | 0.372292597912883 | -0.218335867008717 | -0.203831121956583 | 0.530246596543604 | True | True


record_id: DS057_R00050
dataset_id: DS057
record_json:
{"gene_id":"Ma06_g02940","robust_pathway_count":"2","robust_module_count":"1","modules":"Lipid-ethylene metabolism","pathways":"GO:0006631 | fatty acid metabolic process;GO:0006633 | fatty acid biosynthetic process","all_three_pathway_count":"2","GO_annotation":"Biological Process: fatty acid biosynthetic process (GO:0006633);; Cellular Component: chloroplast (GO:0009507);; Molecular Function: acyl-[acyl-carrier-protein] desaturase activity (GO:0045300);; Biological Process: oxidation-reduction process (GO:0055114);; ","Swiss_Prot_annotation":"Stearoyl-[acyl-carrier-protein] 9-desaturase, chloroplastic","NR_annotation":"PREDICTED: stearoyl-[acyl-carrier-protein] 9-desaturase, chloroplastic-like [Musa acuminata subsp. malaccensis]","recovery_log2fc":"-3.45336491800028","recovery_shrunk_log2fc":"-0.270485601288909","recovery_padj":"0.296054655343203","reciprocal_log2fc":"2.15659264178563","reciprocal_shrunk_log2fc":"1.80393128057295","reciprocal_padj":"1.12167016291414e-07","exclude_pair_log2fc":"1.81529375624467","exclude_pair_shrunk_log2fc":"1.65105941723053","exclude_pair_padj":"1.2342531196597e-08","five_traceable_log2fc":"1.829617157234","five_traceable_shrunk_log2fc":"1.74964167344921","five_traceable_padj":"1.46258840992795e-18","paper_counts_log2fc":"1.71007637524461","paper_counts_shrunk_log2fc":"1.68034859255388","paper_counts_padj":"2.1661872395160197e-40","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma06_g02940 | 2 | 1 | Lipid-ethylene metabolism | GO:0006631 | fatty acid metabolic process;GO:0006633 | fatty acid biosynthetic process | 2 | Biological Process: fatty acid biosynthetic process (GO:0006633);; Cellular Component: chloroplast (GO:0009507);; Molecular Function: acyl-[acyl-carrier-protein] desaturase activity (GO:0045300);; Biological Process: oxidation-reduction process (GO:0055114);;  | Stearoyl-[acyl-carrier-protein] 9-desaturase, chloroplastic | PREDICTED: stearoyl-[acyl-carrier-protein] 9-desaturase, chloroplastic-like [Musa acuminata subsp. malaccensis] | -3.45336491800028 | -0.270485601288909 | 0.296054655343203 | 2.15659264178563 | 1.80393128057295 | 1.12167016291414e-07 | 1.81529375624467 | 1.65105941723053 | 1.2342531196597e-08 | 1.829617157234 | 1.74964167344921 | 1.46258840992795e-18 | 1.71007637524461 | 1.68034859255388 | 2.1661872395160197e-40 | True | True


record_id: DS057_R00051
dataset_id: DS057
record_json:
{"gene_id":"Ma06_g10030","robust_pathway_count":"2","robust_module_count":"1","modules":"Cell cycle and microtubules","pathways":"GO:0005874 | microtubule;GO:0007017 | microtubule-based process","all_three_pathway_count":"2","GO_annotation":"Molecular Function: GTPase activity (GO:0003924);; Molecular Function: structural constituent of cytoskeleton (GO:0005200);; Molecular Function: GTP binding (GO:0005525);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: microtubule (GO:0005874);; Biological Process: microtubule-based movement (GO:0007018);; ","Swiss_Prot_annotation":"Tubulin beta-1 chain","NR_annotation":"PREDICTED: tubulin beta-1 chain-like [Musa acuminata subsp. malaccensis]","recovery_log2fc":"0.293396513753462","recovery_shrunk_log2fc":"0.243932741693983","recovery_padj":"0.677827366780403","reciprocal_log2fc":"-0.509830867831272","reciprocal_shrunk_log2fc":"-0.475353720333035","reciprocal_padj":"0.0864003694607041","exclude_pair_log2fc":"-0.447733852302801","exclude_pair_shrunk_log2fc":"-0.403794661386378","exclude_pair_padj":"0.35884592908432","five_traceable_log2fc":"-0.544749066148583","five_traceable_shrunk_log2fc":"-0.507707799303044","five_traceable_padj":"0.0889946698477555","paper_counts_log2fc":"-0.527296720844311","paper_counts_shrunk_log2fc":"-0.513693569789483","paper_counts_padj":"0.0023983293911282","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma06_g10030 | 2 | 1 | Cell cycle and microtubules | GO:0005874 | microtubule;GO:0007017 | microtubule-based process | 2 | Molecular Function: GTPase activity (GO:0003924);; Molecular Function: structural constituent of cytoskeleton (GO:0005200);; Molecular Function: GTP binding (GO:0005525);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: microtubule (GO:0005874);; Biological Process: microtubule-based movement (GO:0007018);;  | Tubulin beta-1 chain | PREDICTED: tubulin beta-1 chain-like [Musa acuminata subsp. malaccensis] | 0.293396513753462 | 0.243932741693983 | 0.677827366780403 | -0.509830867831272 | -0.475353720333035 | 0.0864003694607041 | -0.447733852302801 | -0.403794661386378 | 0.35884592908432 | -0.544749066148583 | -0.507707799303044 | 0.0889946698477555 | -0.527296720844311 | -0.513693569789483 | 0.0023983293911282 | True | True


record_id: DS057_R00052
dataset_id: DS057
record_json:
{"gene_id":"Ma06_g10050","robust_pathway_count":"2","robust_module_count":"1","modules":"RNA and ribosome biogenesis","pathways":"GO:0005730 | nucleolus;GO:0032040 | small-subunit processome","all_three_pathway_count":"2","GO_annotation":"--","Swiss_Prot_annotation":"--","NR_annotation":"PREDICTED: something about silencing protein 10 isoform X2 [Musa acuminata subsp. malaccensis]","recovery_log2fc":"0.337710197605479","recovery_shrunk_log2fc":"0.242994722076443","recovery_padj":"0.751497851007815","reciprocal_log2fc":"-0.28474941097787","reciprocal_shrunk_log2fc":"-0.261232332371015","reciprocal_padj":"0.463996741024242","exclude_pair_log2fc":"-0.416833519707753","exclude_pair_shrunk_log2fc":"-0.367484685195427","exclude_pair_padj":"0.466572506026102","five_traceable_log2fc":"-0.347619307036859","five_traceable_shrunk_log2fc":"-0.319451857925544","five_traceable_padj":"0.372292597912883","paper_counts_log2fc":"-0.325533341506306","paper_counts_shrunk_log2fc":"-0.317608262742212","paper_counts_padj":"0.0692009745651578","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma06_g10050 | 2 | 1 | RNA and ribosome biogenesis | GO:0005730 | nucleolus;GO:0032040 | small-subunit processome | 2 | -- | -- | PREDICTED: something about silencing protein 10 isoform X2 [Musa acuminata subsp. malaccensis] | 0.337710197605479 | 0.242994722076443 | 0.751497851007815 | -0.28474941097787 | -0.261232332371015 | 0.463996741024242 | -0.416833519707753 | -0.367484685195427 | 0.466572506026102 | -0.347619307036859 | -0.319451857925544 | 0.372292597912883 | -0.325533341506306 | -0.317608262742212 | 0.0692009745651578 | True | True


record_id: DS057_R00053
dataset_id: DS057
record_json:
{"gene_id":"Ma06_g28030","robust_pathway_count":"2","robust_module_count":"1","modules":"RNA and ribosome biogenesis","pathways":"GO:0005730 | nucleolus;GO:0032040 | small-subunit processome","all_three_pathway_count":"2","GO_annotation":"--","Swiss_Prot_annotation":"Periodic tryptophan protein 2","NR_annotation":"PREDICTED: periodic tryptophan protein 2 homolog [Musa acuminata subsp. malaccensis]","recovery_log2fc":"0.415407755052397","recovery_shrunk_log2fc":"0.258924851545308","recovery_padj":"0.754501463430607","reciprocal_log2fc":"-0.438258166324097","reciprocal_shrunk_log2fc":"-0.394483669114262","reciprocal_padj":"0.273962047896335","exclude_pair_log2fc":"-0.672747126132496","exclude_pair_shrunk_log2fc":"-0.62160916024015","exclude_pair_padj":"0.0573359579274117","five_traceable_log2fc":"-0.671068397620886","five_traceable_shrunk_log2fc":"-0.649776431918447","five_traceable_padj":"0.0005169020152158","paper_counts_log2fc":"-0.636791315856727","paper_counts_shrunk_log2fc":"-0.626937075994952","paper_counts_padj":"6.35284788293433e-07","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma06_g28030 | 2 | 1 | RNA and ribosome biogenesis | GO:0005730 | nucleolus;GO:0032040 | small-subunit processome | 2 | -- | Periodic tryptophan protein 2 | PREDICTED: periodic tryptophan protein 2 homolog [Musa acuminata subsp. malaccensis] | 0.415407755052397 | 0.258924851545308 | 0.754501463430607 | -0.438258166324097 | -0.394483669114262 | 0.273962047896335 | -0.672747126132496 | -0.62160916024015 | 0.0573359579274117 | -0.671068397620886 | -0.649776431918447 | 0.0005169020152158 | -0.636791315856727 | -0.626937075994952 | 6.35284788293433e-07 | True | True


record_id: DS057_R00054
dataset_id: DS057
record_json:
{"gene_id":"Ma06_g31220","robust_pathway_count":"2","robust_module_count":"1","modules":"Cell cycle and microtubules","pathways":"GO:0005874 | microtubule;GO:0008017 | microtubule binding","all_three_pathway_count":"2","GO_annotation":"--","Swiss_Prot_annotation":"Protein TPX2","NR_annotation":"PREDICTED: protein TPX2-like [Musa acuminata subsp. malaccensis]","recovery_log2fc":"0.837109100520438","recovery_shrunk_log2fc":"0.525257574426389","recovery_padj":"0.359616913946809","reciprocal_log2fc":"-0.630883276814298","reciprocal_shrunk_log2fc":"-0.58677854032216","reciprocal_padj":"0.0292282740974022","exclude_pair_log2fc":"-0.4408423777282","exclude_pair_shrunk_log2fc":"-0.406351238958556","exclude_pair_padj":"0.288723627702116","five_traceable_log2fc":"-0.427375740744024","five_traceable_shrunk_log2fc":"-0.411932970109813","five_traceable_padj":"0.0579039306250487","paper_counts_log2fc":"-0.472252635172571","paper_counts_shrunk_log2fc":"-0.460200052029267","paper_counts_padj":"0.006951898702665","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma06_g31220 | 2 | 1 | Cell cycle and microtubules | GO:0005874 | microtubule;GO:0008017 | microtubule binding | 2 | -- | Protein TPX2 | PREDICTED: protein TPX2-like [Musa acuminata subsp. malaccensis] | 0.837109100520438 | 0.525257574426389 | 0.359616913946809 | -0.630883276814298 | -0.58677854032216 | 0.0292282740974022 | -0.4408423777282 | -0.406351238958556 | 0.288723627702116 | -0.427375740744024 | -0.411932970109813 | 0.0579039306250487 | -0.472252635172571 | -0.460200052029267 | 0.006951898702665 | True | True


record_id: DS057_R00055
dataset_id: DS057
record_json:
{"gene_id":"Ma07_g15080","robust_pathway_count":"2","robust_module_count":"1","modules":"Lipid-ethylene metabolism","pathways":"GO:0006631 | fatty acid metabolic process;GO:0006633 | fatty acid biosynthetic process","all_three_pathway_count":"2","GO_annotation":"Cellular Component: integral component of membrane (GO:0016021);; ","Swiss_Prot_annotation":"Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase PASTICCINO 2A","NR_annotation":"PREDICTED: very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase PASTICCINO 2A [Musa acuminata subsp. malaccensis]","recovery_log2fc":"-5.90248277968902","recovery_shrunk_log2fc":"-0.709653885981824","recovery_padj":"0.0087440542448705","reciprocal_log2fc":"0.6847516080268","reciprocal_shrunk_log2fc":"0.651721532329061","reciprocal_padj":"0.002314864319259","exclude_pair_log2fc":"0.740887046847023","exclude_pair_shrunk_log2fc":"0.677296537453242","exclude_pair_padj":"0.0485077101429816","five_traceable_log2fc":"0.758199549969203","five_traceable_shrunk_log2fc":"0.724226894288014","five_traceable_padj":"0.0011282743066561","paper_counts_log2fc":"0.700600662257345","paper_counts_shrunk_log2fc":"0.68021736553889","paper_counts_padj":"0.000102156393546","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma07_g15080 | 2 | 1 | Lipid-ethylene metabolism | GO:0006631 | fatty acid metabolic process;GO:0006633 | fatty acid biosynthetic process | 2 | Cellular Component: integral component of membrane (GO:0016021);;  | Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase PASTICCINO 2A | PREDICTED: very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase PASTICCINO 2A [Musa acuminata subsp. malaccensis] | -5.90248277968902 | -0.709653885981824 | 0.0087440542448705 | 0.6847516080268 | 0.651721532329061 | 0.002314864319259 | 0.740887046847023 | 0.677296537453242 | 0.0485077101429816 | 0.758199549969203 | 0.724226894288014 | 0.0011282743066561 | 0.700600662257345 | 0.68021736553889 | 0.000102156393546 | True | True


record_id: DS057_R00056
dataset_id: DS057
record_json:
{"gene_id":"Ma07_g21640","robust_pathway_count":"2","robust_module_count":"1","modules":"RNA and ribosome biogenesis","pathways":"GO:0005730 | nucleolus;GO:0042254 | ribosome biogenesis","all_three_pathway_count":"2","GO_annotation":"Molecular Function: RNA binding (GO:0003723);; Biological Process: rRNA processing (GO:0006364);; Molecular Function: S-adenosylmethionine-dependent methyltransferase activity (GO:0008757);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: methylation (GO:0032259);; Biological Process: transmembrane transport (GO:0055085);; ","Swiss_Prot_annotation":"--","NR_annotation":"PREDICTED: probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase [Musa acuminata subsp. malaccensis]","recovery_log2fc":"0.379900411082372","recovery_shrunk_log2fc":"0.293789069953701","recovery_padj":"0.640430174645477","reciprocal_log2fc":"-0.335278032323623","reciprocal_shrunk_log2fc":"-0.31916112225128","reciprocal_padj":"0.200419655799305","exclude_pair_log2fc":"-0.457583498307268","exclude_pair_shrunk_log2fc":"-0.425713040054328","exclude_pair_padj":"0.224249298078911","five_traceable_log2fc":"-0.456907470210729","five_traceable_shrunk_log2fc":"-0.443689119183525","five_traceable_padj":"0.0188421176140876","paper_counts_log2fc":"-0.458606559979262","paper_counts_shrunk_log2fc":"-0.452946987138796","paper_counts_padj":"8.00296669842984e-05","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma07_g21640 | 2 | 1 | RNA and ribosome biogenesis | GO:0005730 | nucleolus;GO:0042254 | ribosome biogenesis | 2 | Molecular Function: RNA binding (GO:0003723);; Biological Process: rRNA processing (GO:0006364);; Molecular Function: S-adenosylmethionine-dependent methyltransferase activity (GO:0008757);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: methylation (GO:0032259);; Biological Process: transmembrane transport (GO:0055085);;  | -- | PREDICTED: probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase [Musa acuminata subsp. malaccensis] | 0.379900411082372 | 0.293789069953701 | 0.640430174645477 | -0.335278032323623 | -0.31916112225128 | 0.200419655799305 | -0.457583498307268 | -0.425713040054328 | 0.224249298078911 | -0.456907470210729 | -0.443689119183525 | 0.0188421176140876 | -0.458606559979262 | -0.452946987138796 | 8.00296669842984e-05 | True | True


record_id: DS057_R00057
dataset_id: DS057
record_json:
{"gene_id":"Ma07_g24460","robust_pathway_count":"2","robust_module_count":"1","modules":"Lipid-ethylene metabolism","pathways":"GO:0006631 | fatty acid metabolic process;GO:0006633 | fatty acid biosynthetic process","all_three_pathway_count":"2","GO_annotation":"Biological Process: fatty acid biosynthetic process (GO:0006633);; Molecular Function: thiolester hydrolase activity (GO:0016790);; ","Swiss_Prot_annotation":"Palmitoyl-acyl carrier protein thioesterase, chloroplastic","NR_annotation":"PREDICTED: palmitoyl-acyl carrier protein thioesterase, chloroplastic [Musa acuminata subsp. malaccensis]","recovery_log2fc":"-0.390481695317366","recovery_shrunk_log2fc":"-0.335858009790516","recovery_padj":"0.444241311345225","reciprocal_log2fc":"1.25146442458742","reciprocal_shrunk_log2fc":"1.08496310423421","reciprocal_padj":"0.0012151845553047","exclude_pair_log2fc":"1.56890024467569","exclude_pair_shrunk_log2fc":"1.33746564627137","exclude_pair_padj":"0.000538279416563","five_traceable_log2fc":"1.4427394997718","five_traceable_shrunk_log2fc":"1.27373570357591","five_traceable_padj":"0.0001606796579711","paper_counts_log2fc":"2.0615588619997","paper_counts_shrunk_log2fc":"2.01519991543423","paper_counts_padj":"4.12204343554099e-45","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma07_g24460 | 2 | 1 | Lipid-ethylene metabolism | GO:0006631 | fatty acid metabolic process;GO:0006633 | fatty acid biosynthetic process | 2 | Biological Process: fatty acid biosynthetic process (GO:0006633);; Molecular Function: thiolester hydrolase activity (GO:0016790);;  | Palmitoyl-acyl carrier protein thioesterase, chloroplastic | PREDICTED: palmitoyl-acyl carrier protein thioesterase, chloroplastic [Musa acuminata subsp. malaccensis] | -0.390481695317366 | -0.335858009790516 | 0.444241311345225 | 1.25146442458742 | 1.08496310423421 | 0.0012151845553047 | 1.56890024467569 | 1.33746564627137 | 0.000538279416563 | 1.4427394997718 | 1.27373570357591 | 0.0001606796579711 | 2.0615588619997 | 2.01519991543423 | 4.12204343554099e-45 | True | True


record_id: DS057_R00058
dataset_id: DS057
record_json:
{"gene_id":"Ma07_g28100","robust_pathway_count":"2","robust_module_count":"1","modules":"Cell cycle and microtubules","pathways":"GO:0005874 | microtubule;GO:0008017 | microtubule binding","all_three_pathway_count":"2","GO_annotation":"--","Swiss_Prot_annotation":"Protein TPX2","NR_annotation":"PREDICTED: uncharacterized protein LOC103992919 [Musa acuminata subsp. malaccensis]","recovery_log2fc":"0.77999279746183","recovery_shrunk_log2fc":"0.474140254320846","recovery_padj":"0.44285925312772","reciprocal_log2fc":"-0.408407894389246","reciprocal_shrunk_log2fc":"-0.387461987444959","reciprocal_padj":"0.11824432810727","exclude_pair_log2fc":"-0.380168867289152","exclude_pair_shrunk_log2fc":"-0.339544373837271","exclude_pair_padj":"0.487231168016108","five_traceable_log2fc":"-0.373796042800807","five_traceable_shrunk_log2fc":"-0.353795462908188","five_traceable_padj":"0.20510610290618","paper_counts_log2fc":"-0.344077735287318","paper_counts_shrunk_log2fc":"-0.324127461040211","paper_counts_padj":"0.248822635606032","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma07_g28100 | 2 | 1 | Cell cycle and microtubules | GO:0005874 | microtubule;GO:0008017 | microtubule binding | 2 | -- | Protein TPX2 | PREDICTED: uncharacterized protein LOC103992919 [Musa acuminata subsp. malaccensis] | 0.77999279746183 | 0.474140254320846 | 0.44285925312772 | -0.408407894389246 | -0.387461987444959 | 0.11824432810727 | -0.380168867289152 | -0.339544373837271 | 0.487231168016108 | -0.373796042800807 | -0.353795462908188 | 0.20510610290618 | -0.344077735287318 | -0.324127461040211 | 0.248822635606032 | True | True


record_id: DS057_R00059
dataset_id: DS057
record_json:
{"gene_id":"Ma08_g04470","robust_pathway_count":"2","robust_module_count":"1","modules":"Cell cycle and microtubules","pathways":"GO:0005874 | microtubule;GO:0008017 | microtubule binding","all_three_pathway_count":"2","GO_annotation":"Cellular Component: membrane (GO:0016020);; ","Swiss_Prot_annotation":"Protein SINE1","NR_annotation":"PREDICTED: uncharacterized protein LOC103993855 [Musa acuminata subsp. malaccensis] ","recovery_log2fc":"1.03154801602477","recovery_shrunk_log2fc":"0.853527256623832","recovery_padj":"0.0054710642756365","reciprocal_log2fc":"-0.560088262112439","reciprocal_shrunk_log2fc":"-0.53619745125643","reciprocal_padj":"0.0096014138319822","exclude_pair_log2fc":"-0.670726208477955","exclude_pair_shrunk_log2fc":"-0.62381571182267","exclude_pair_padj":"0.0453718340580205","five_traceable_log2fc":"-0.667165036228663","five_traceable_shrunk_log2fc":"-0.648938536516721","five_traceable_padj":"0.0001654795688722","paper_counts_log2fc":"-0.35004258742217","paper_counts_shrunk_log2fc":"-0.339942054596524","paper_counts_padj":"0.0740771408818312","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma08_g04470 | 2 | 1 | Cell cycle and microtubules | GO:0005874 | microtubule;GO:0008017 | microtubule binding | 2 | Cellular Component: membrane (GO:0016020);;  | Protein SINE1 | PREDICTED: uncharacterized protein LOC103993855 [Musa acuminata subsp. malaccensis]  | 1.03154801602477 | 0.853527256623832 | 0.0054710642756365 | -0.560088262112439 | -0.53619745125643 | 0.0096014138319822 | -0.670726208477955 | -0.62381571182267 | 0.0453718340580205 | -0.667165036228663 | -0.648938536516721 | 0.0001654795688722 | -0.35004258742217 | -0.339942054596524 | 0.0740771408818312 | True | True


record_id: DS057_R00060
dataset_id: DS057
record_json:
{"gene_id":"Ma08_g19420","robust_pathway_count":"2","robust_module_count":"1","modules":"RNA and ribosome biogenesis","pathways":"GO:0005730 | nucleolus;GO:0032040 | small-subunit processome","all_three_pathway_count":"2","GO_annotation":"Biological Process: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (GO:0000462);; Cellular Component: nucleolus (GO:0005730);; Cellular Component: small-subunit processome (GO:0032040);; Cellular Component: Cul4-RING E3 ubiquitin ligase complex (GO:0080008);; ","Swiss_Prot_annotation":"Dynein assembly factor with WDR repeat domains 1","NR_annotation":"PREDICTED: DDB1- and CUL4-associated factor 13 isoform X1 [Musa acuminata subsp. malaccensis]","recovery_log2fc":"0.431796987040609","recovery_shrunk_log2fc":"0.320521017091306","recovery_padj":"0.615084447192498","reciprocal_log2fc":"-0.361690919310486","reciprocal_shrunk_log2fc":"-0.337473850158278","reciprocal_padj":"0.25859913013416","exclude_pair_log2fc":"-0.520379870753327","exclude_pair_shrunk_log2fc":"-0.478036093430216","exclude_pair_padj":"0.197330637486666","five_traceable_log2fc":"-0.515948180912763","five_traceable_shrunk_log2fc":"-0.495839321166986","five_traceable_padj":"0.0238037531880397","paper_counts_log2fc":"-0.539687905010294","paper_counts_shrunk_log2fc":"-0.527770829947461","paper_counts_padj":"0.0006595912215393","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma08_g19420 | 2 | 1 | RNA and ribosome biogenesis | GO:0005730 | nucleolus;GO:0032040 | small-subunit processome | 2 | Biological Process: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (GO:0000462);; Cellular Component: nucleolus (GO:0005730);; Cellular Component: small-subunit processome (GO:0032040);; Cellular Component: Cul4-RING E3 ubiquitin ligase complex (GO:0080008);;  | Dynein assembly factor with WDR repeat domains 1 | PREDICTED: DDB1- and CUL4-associated factor 13 isoform X1 [Musa acuminata subsp. malaccensis] | 0.431796987040609 | 0.320521017091306 | 0.615084447192498 | -0.361690919310486 | -0.337473850158278 | 0.25859913013416 | -0.520379870753327 | -0.478036093430216 | 0.197330637486666 | -0.515948180912763 | -0.495839321166986 | 0.0238037531880397 | -0.539687905010294 | -0.527770829947461 | 0.0006595912215393 | True | True


record_id: DS057_R00061
dataset_id: DS057
record_json:
{"gene_id":"Ma08_g19570","robust_pathway_count":"2","robust_module_count":"1","modules":"Cell cycle and microtubules","pathways":"GO:0005874 | microtubule;GO:0008017 | microtubule binding","all_three_pathway_count":"2","GO_annotation":"--","Swiss_Prot_annotation":"Protein TPX2","NR_annotation":"PREDICTED: protein TPX2-like isoform X5 [Musa acuminata subsp. malaccensis]","recovery_log2fc":"1.68425166305889","recovery_shrunk_log2fc":"0.505359922659774","recovery_padj":"0.339381279432193","reciprocal_log2fc":"-0.465655480216667","reciprocal_shrunk_log2fc":"-0.431642180535053","reciprocal_padj":"0.145457541764418","exclude_pair_log2fc":"-0.544935870358193","exclude_pair_shrunk_log2fc":"-0.485201951522962","exclude_pair_padj":"0.271500778308165","five_traceable_log2fc":"-0.469041129050102","five_traceable_shrunk_log2fc":"-0.434014901736489","five_traceable_padj":"0.179557324489017","paper_counts_log2fc":"-0.406383920964655","paper_counts_shrunk_log2fc":"-0.380012868945351","paper_counts_padj":"0.191663197291223","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma08_g19570 | 2 | 1 | Cell cycle and microtubules | GO:0005874 | microtubule;GO:0008017 | microtubule binding | 2 | -- | Protein TPX2 | PREDICTED: protein TPX2-like isoform X5 [Musa acuminata subsp. malaccensis] | 1.68425166305889 | 0.505359922659774 | 0.339381279432193 | -0.465655480216667 | -0.431642180535053 | 0.145457541764418 | -0.544935870358193 | -0.485201951522962 | 0.271500778308165 | -0.469041129050102 | -0.434014901736489 | 0.179557324489017 | -0.406383920964655 | -0.380012868945351 | 0.191663197291223 | True | True


record_id: DS057_R00062
dataset_id: DS057
record_json:
{"gene_id":"Ma08_g23470","robust_pathway_count":"2","robust_module_count":"1","modules":"Cell cycle and microtubules","pathways":"GO:0000278 | mitotic cell cycle;GO:0005874 | microtubule","all_three_pathway_count":"2","GO_annotation":"Cellular Component: spindle pole (GO:0000922);; Cellular Component: equatorial microtubule organizing center (GO:0000923);; Molecular Function: structural constituent of cytoskeleton (GO:0005200);; Cellular Component: nuclear envelope (GO:0005635);; Cellular Component: centrosome (GO:0005813);; Cellular Component: spindle pole body (GO:0005816);; Biological Process: meiotic cell cycle (GO:0007126);; Cellular Component: gamma-tubulin small complex (GO:0008275);; Biological Process: response to nematode (GO:0009624);; Cellular Component: cytoplasmic side of plasma membrane (GO:0009898);; Biological Process: cytoplasmic microtubule organization (GO:0031122);; Molecular Function: gamma-tubulin binding (GO:0043015);; Molecular Function: microtubule minus-end binding (GO:0051011);; Biological Process: centrosome duplication (GO:0051298);; Biological Process: interphase microtubule nucleation by interphase microtubule organizing center (GO:0051415);; Cellular Component: cortical microtubule (GO:0055028);; Biological Process: positive regulation of microtubule nucleation (GO:0090063);; Biological Process: mitotic spindle assembly (GO:0090307);; ","Swiss_Prot_annotation":"Gamma-tubulin complex component 3","NR_annotation":"PREDICTED: gamma-tubulin complex component 3-like [Musa acuminata subsp. malaccensis] ","recovery_log2fc":"0.673882665046582","recovery_shrunk_log2fc":"0.246153051746763","recovery_padj":"0.768960643353785","reciprocal_log2fc":"-0.553230585017102","reciprocal_shrunk_log2fc":"-0.527291482080692","reciprocal_padj":"0.0161133833366601","exclude_pair_log2fc":"-0.667444728250227","exclude_pair_shrunk_log2fc":"-0.610174800646821","exclude_pair_padj":"0.0841704544270767","five_traceable_log2fc":"-0.579610319433116","five_traceable_shrunk_log2fc":"-0.551401282177949","five_traceable_padj":"0.0237672291126547","paper_counts_log2fc":"-0.487235937716206","paper_counts_shrunk_log2fc":"-0.474090072760714","paper_counts_padj":"0.0067682955148501","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma08_g23470 | 2 | 1 | Cell cycle and microtubules | GO:0000278 | mitotic cell cycle;GO:0005874 | microtubule | 2 | Cellular Component: spindle pole (GO:0000922);; Cellular Component: equatorial microtubule organizing center (GO:0000923);; Molecular Function: structural constituent of cytoskeleton (GO:0005200);; Cellular Component: nuclear envelope (GO:0005635);; Cellular Component: centrosome (GO:0005813);; Cellular Component: spindle pole body (GO:0005816);; Biological Process: meiotic cell cycle (GO:0007126);; Cellular Component: gamma-tubulin small complex (GO:0008275);; Biological Process: response to nematode (GO:0009624);; Cellular Component: cytoplasmic side of plasma membrane (GO:0009898);; Biological Process: cytoplasmic microtubule organization (GO:0031122);; Molecular Function: gamma-tubulin binding (GO:0043015);; Molecular Function: microtubule minus-end binding (GO:0051011);; Biological Process: centrosome duplication (GO:0051298);; Biological Process: interphase microtubule nucleation by interphase microtubule organizing center (GO:0051415);; Cellular Component: cortical microtubule (GO:0055028);; Biological Process: positive regulation of microtubule nucleation (GO:0090063);; Biological Process: mitotic spindle assembly (GO:0090307);;  | Gamma-tubulin complex component 3 | PREDICTED: gamma-tubulin complex component 3-like [Musa acuminata subsp. malaccensis]  | 0.673882665046582 | 0.246153051746763 | 0.768960643353785 | -0.553230585017102 | -0.527291482080692 | 0.0161133833366601 | -0.667444728250227 | -0.610174800646821 | 0.0841704544270767 | -0.579610319433116 | -0.551401282177949 | 0.0237672291126547 | -0.487235937716206 | -0.474090072760714 | 0.0067682955148501 | True | True


record_id: DS057_R00063
dataset_id: DS057
record_json:
{"gene_id":"Ma08_g30140","robust_pathway_count":"2","robust_module_count":"1","modules":"RNA and ribosome biogenesis","pathways":"GO:0005730 | nucleolus;GO:0006364 | rRNA processing","all_three_pathway_count":"2","GO_annotation":"Biological Process: ribosomal large subunit assembly (GO:0000027);; Biological Process: maturation of 5.8S rRNA (GO:0000460);; Biological Process: maturation of LSU-rRNA (GO:0000470);; Cellular Component: nucleolus (GO:0005730);; Cellular Component: preribosome, large subunit precursor (GO:0030687);; Molecular Function: rRNA primary transcript binding (GO:0042134);; ","Swiss_Prot_annotation":"--","NR_annotation":"PREDICTED: ribosome production factor 1 [Musa acuminata subsp. malaccensis] ","recovery_log2fc":"0.599656687359338","recovery_shrunk_log2fc":"0.540578187149487","recovery_padj":"0.0405788228112857","reciprocal_log2fc":"-0.183320238054073","reciprocal_shrunk_log2fc":"-0.178357016207666","reciprocal_padj":"0.379611364660353","exclude_pair_log2fc":"-0.190379687454713","exclude_pair_shrunk_log2fc":"-0.176918344325096","exclude_pair_padj":"0.701754590891448","five_traceable_log2fc":"-0.196313487637924","five_traceable_shrunk_log2fc":"-0.190541663835441","five_traceable_padj":"0.393177975657788","paper_counts_log2fc":"-0.0893426147392919","paper_counts_shrunk_log2fc":"-0.0878504190096323","paper_counts_padj":"0.607444732599336","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma08_g30140 | 2 | 1 | RNA and ribosome biogenesis | GO:0005730 | nucleolus;GO:0006364 | rRNA processing | 2 | Biological Process: ribosomal large subunit assembly (GO:0000027);; Biological Process: maturation of 5.8S rRNA (GO:0000460);; Biological Process: maturation of LSU-rRNA (GO:0000470);; Cellular Component: nucleolus (GO:0005730);; Cellular Component: preribosome, large subunit precursor (GO:0030687);; Molecular Function: rRNA primary transcript binding (GO:0042134);;  | -- | PREDICTED: ribosome production factor 1 [Musa acuminata subsp. malaccensis]  | 0.599656687359338 | 0.540578187149487 | 0.0405788228112857 | -0.183320238054073 | -0.178357016207666 | 0.379611364660353 | -0.190379687454713 | -0.176918344325096 | 0.701754590891448 | -0.196313487637924 | -0.190541663835441 | 0.393177975657788 | -0.0893426147392919 | -0.0878504190096323 | 0.607444732599336 | True | True


record_id: DS057_R00064
dataset_id: DS057
record_json:
{"gene_id":"Ma09_g08040","robust_pathway_count":"2","robust_module_count":"1","modules":"RNA and ribosome biogenesis","pathways":"GO:0001522 | pseudouridine synthesis;GO:0008033 | tRNA processing","all_three_pathway_count":"2","GO_annotation":"Biological Process: pseudouridine synthesis (GO:0001522);; Molecular Function: RNA binding (GO:0003723);; Biological Process: tRNA processing (GO:0008033);; Molecular Function: pseudouridine synthase activity (GO:0009982);; ","Swiss_Prot_annotation":"--","NR_annotation":"PREDICTED: uncharacterized protein LOC103997456 isoform X1 [Musa acuminata subsp. malaccensis] ","recovery_log2fc":"0.67971470852559","recovery_shrunk_log2fc":"0.48691169499012","recovery_padj":"0.364081174898956","reciprocal_log2fc":"-0.374037793243372","reciprocal_shrunk_log2fc":"-0.35300766586326","reciprocal_padj":"0.186003839215071","exclude_pair_log2fc":"-0.441003578460627","exclude_pair_shrunk_log2fc":"-0.392272477104209","exclude_pair_padj":"0.410828407194461","five_traceable_log2fc":"-0.402678624801475","five_traceable_shrunk_log2fc":"-0.379227116948971","five_traceable_padj":"0.189156191557784","paper_counts_log2fc":"-0.276467827047","paper_counts_shrunk_log2fc":"-0.270137112743416","paper_counts_padj":"0.118229388580093","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma09_g08040 | 2 | 1 | RNA and ribosome biogenesis | GO:0001522 | pseudouridine synthesis;GO:0008033 | tRNA processing | 2 | Biological Process: pseudouridine synthesis (GO:0001522);; Molecular Function: RNA binding (GO:0003723);; Biological Process: tRNA processing (GO:0008033);; Molecular Function: pseudouridine synthase activity (GO:0009982);;  | -- | PREDICTED: uncharacterized protein LOC103997456 isoform X1 [Musa acuminata subsp. malaccensis]  | 0.67971470852559 | 0.48691169499012 | 0.364081174898956 | -0.374037793243372 | -0.35300766586326 | 0.186003839215071 | -0.441003578460627 | -0.392272477104209 | 0.410828407194461 | -0.402678624801475 | -0.379227116948971 | 0.189156191557784 | -0.276467827047 | -0.270137112743416 | 0.118229388580093 | True | True


record_id: DS057_R00065
dataset_id: DS057
record_json:
{"gene_id":"Ma09_g23560","robust_pathway_count":"2","robust_module_count":"1","modules":"Cell cycle and microtubules","pathways":"GO:0005874 | microtubule;GO:0008017 | microtubule binding","all_three_pathway_count":"2","GO_annotation":"--","Swiss_Prot_annotation":"TORTIFOLIA1-like protein 2","NR_annotation":"PREDICTED: microtubule-associated protein TORTIFOLIA1-like [Musa acuminata subsp. malaccensis]","recovery_log2fc":"0.970742506860318","recovery_shrunk_log2fc":"0.595118997388113","recovery_padj":"0.266058270922786","reciprocal_log2fc":"-0.831341034318675","reciprocal_shrunk_log2fc":"-0.785630931333614","reciprocal_padj":"0.0004128989242014","exclude_pair_log2fc":"-0.651942691567185","exclude_pair_shrunk_log2fc":"-0.600557802916","exclude_pair_padj":"0.0750270407866513","five_traceable_log2fc":"-0.702522875191309","five_traceable_shrunk_log2fc":"-0.673819143383849","five_traceable_padj":"0.0016528364609325","paper_counts_log2fc":"-0.736391275058034","paper_counts_shrunk_log2fc":"-0.718707382149756","paper_counts_padj":"4.82045163204552e-06","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma09_g23560 | 2 | 1 | Cell cycle and microtubules | GO:0005874 | microtubule;GO:0008017 | microtubule binding | 2 | -- | TORTIFOLIA1-like protein 2 | PREDICTED: microtubule-associated protein TORTIFOLIA1-like [Musa acuminata subsp. malaccensis] | 0.970742506860318 | 0.595118997388113 | 0.266058270922786 | -0.831341034318675 | -0.785630931333614 | 0.0004128989242014 | -0.651942691567185 | -0.600557802916 | 0.0750270407866513 | -0.702522875191309 | -0.673819143383849 | 0.0016528364609325 | -0.736391275058034 | -0.718707382149756 | 4.82045163204552e-06 | True | True


record_id: DS057_R00066
dataset_id: DS057
record_json:
{"gene_id":"Ma10_g18980","robust_pathway_count":"2","robust_module_count":"1","modules":"Lipid-ethylene metabolism","pathways":"GO:0006631 | fatty acid metabolic process;GO:0006633 | fatty acid biosynthetic process","all_three_pathway_count":"2","GO_annotation":"Molecular Function: acetyl-CoA carboxylase activity (GO:0003989);; Molecular Function: biotin carboxylase activity (GO:0004075);; Molecular Function: ATP binding (GO:0005524);; Biological Process: fatty acid biosynthetic process (GO:0006633);; Molecular Function: metal ion binding (GO:0046872);; ","Swiss_Prot_annotation":"Acetyl-CoA carboxylase 1","NR_annotation":"PREDICTED: acetyl-CoA carboxylase 1 [Musa acuminata subsp. malaccensis]","recovery_log2fc":"-0.836821834833185","recovery_shrunk_log2fc":"-0.637844581726503","recovery_padj":"0.125590532498656","reciprocal_log2fc":"0.634319090658376","reciprocal_shrunk_log2fc":"0.617773397417728","reciprocal_padj":"5.11590472918335e-05","exclude_pair_log2fc":"0.584941773575796","exclude_pair_shrunk_log2fc":"0.546971519463194","exclude_pair_padj":"0.0765540278232858","five_traceable_log2fc":"0.621967801512486","five_traceable_shrunk_log2fc":"0.604427174303644","five_traceable_padj":"0.0006295571113104","paper_counts_log2fc":"0.643457499767276","paper_counts_shrunk_log2fc":"0.636810776880015","paper_counts_padj":"3.35187036365134e-10","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma10_g18980 | 2 | 1 | Lipid-ethylene metabolism | GO:0006631 | fatty acid metabolic process;GO:0006633 | fatty acid biosynthetic process | 2 | Molecular Function: acetyl-CoA carboxylase activity (GO:0003989);; Molecular Function: biotin carboxylase activity (GO:0004075);; Molecular Function: ATP binding (GO:0005524);; Biological Process: fatty acid biosynthetic process (GO:0006633);; Molecular Function: metal ion binding (GO:0046872);;  | Acetyl-CoA carboxylase 1 | PREDICTED: acetyl-CoA carboxylase 1 [Musa acuminata subsp. malaccensis] | -0.836821834833185 | -0.637844581726503 | 0.125590532498656 | 0.634319090658376 | 0.617773397417728 | 5.11590472918335e-05 | 0.584941773575796 | 0.546971519463194 | 0.0765540278232858 | 0.621967801512486 | 0.604427174303644 | 0.0006295571113104 | 0.643457499767276 | 0.636810776880015 | 3.35187036365134e-10 | True | True


record_id: DS057_R00067
dataset_id: DS057
record_json:
{"gene_id":"Ma10_g20770","robust_pathway_count":"2","robust_module_count":"1","modules":"RNA and ribosome biogenesis","pathways":"GO:0006364 | rRNA processing;GO:0008033 | tRNA processing","all_three_pathway_count":"2","GO_annotation":"Molecular Function: 3'-5'-exoribonuclease activity (GO:0000175);; Biological Process: mitochondrial RNA catabolic process (GO:0000957);; Biological Process: mitochondrial RNA processing (GO:0000963);; Molecular Function: RNA binding (GO:0003723);; Molecular Function: polyribonucleotide nucleotidyltransferase activity (GO:0004654);; Cellular Component: mitochondrion (GO:0005739);; Biological Process: mRNA catabolic process (GO:0006402);; Biological Process: ncRNA processing (GO:0034470);; Biological Process: RNA phosphodiester bond hydrolysis, exonucleolytic (GO:0090503);; ","Swiss_Prot_annotation":"Polyribonucleotide nucleotidyltransferase 2, mitochondrial","NR_annotation":"PREDICTED: polyribonucleotide nucleotidyltransferase 2, mitochondrial [Musa acuminata subsp. malaccensis]","recovery_log2fc":"0.908703203183811","recovery_shrunk_log2fc":"0.668212663357208","recovery_padj":"0.118636927443523","reciprocal_log2fc":"-0.37446487586549","reciprocal_shrunk_log2fc":"-0.348118232723338","reciprocal_padj":"0.253856948821258","exclude_pair_log2fc":"-0.536980998764351","exclude_pair_shrunk_log2fc":"-0.48327902097281","exclude_pair_padj":"0.248197287017206","five_traceable_log2fc":"-0.473391483488363","five_traceable_shrunk_log2fc":"-0.443790922573197","five_traceable_padj":"0.128528612307374","paper_counts_log2fc":"-0.482172211608085","paper_counts_shrunk_log2fc":"-0.463862973429687","paper_counts_padj":"0.0286196202513185","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma10_g20770 | 2 | 1 | RNA and ribosome biogenesis | GO:0006364 | rRNA processing;GO:0008033 | tRNA processing | 2 | Molecular Function: 3'-5'-exoribonuclease activity (GO:0000175);; Biological Process: mitochondrial RNA catabolic process (GO:0000957);; Biological Process: mitochondrial RNA processing (GO:0000963);; Molecular Function: RNA binding (GO:0003723);; Molecular Function: polyribonucleotide nucleotidyltransferase activity (GO:0004654);; Cellular Component: mitochondrion (GO:0005739);; Biological Process: mRNA catabolic process (GO:0006402);; Biological Process: ncRNA processing (GO:0034470);; Biological Process: RNA phosphodiester bond hydrolysis, exonucleolytic (GO:0090503);;  | Polyribonucleotide nucleotidyltransferase 2, mitochondrial | PREDICTED: polyribonucleotide nucleotidyltransferase 2, mitochondrial [Musa acuminata subsp. malaccensis] | 0.908703203183811 | 0.668212663357208 | 0.118636927443523 | -0.37446487586549 | -0.348118232723338 | 0.253856948821258 | -0.536980998764351 | -0.48327902097281 | 0.248197287017206 | -0.473391483488363 | -0.443790922573197 | 0.128528612307374 | -0.482172211608085 | -0.463862973429687 | 0.0286196202513185 | True | True


record_id: DS057_R00068
dataset_id: DS057
record_json:
{"gene_id":"Ma11_g15290","robust_pathway_count":"2","robust_module_count":"1","modules":"RNA and ribosome biogenesis","pathways":"GO:0001522 | pseudouridine synthesis;GO:0008033 | tRNA processing","all_three_pathway_count":"2","GO_annotation":"Biological Process: pseudouridine synthesis (GO:0001522);; Molecular Function: RNA binding (GO:0003723);; Cellular Component: plastid (GO:0009536);; Molecular Function: pseudouridine synthase activity (GO:0009982);; ","Swiss_Prot_annotation":"Putative tRNA pseudouridine synthase","NR_annotation":"PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like [Musa acuminata subsp. malaccensis]","recovery_log2fc":"2.18667628918057","recovery_shrunk_log2fc":"1.4027751534098","recovery_padj":"7.73329907158715e-05","reciprocal_log2fc":"-0.231561932625822","reciprocal_shrunk_log2fc":"-0.219772374654881","reciprocal_padj":"0.434289723278815","exclude_pair_log2fc":"-0.340091932690441","exclude_pair_shrunk_log2fc":"-0.307667408035617","exclude_pair_padj":"0.514384002321068","five_traceable_log2fc":"-0.266951909451167","five_traceable_shrunk_log2fc":"-0.253015923597679","five_traceable_padj":"0.38866242105682","paper_counts_log2fc":"-0.337280352291345","paper_counts_shrunk_log2fc":"-0.322115890813943","paper_counts_padj":"0.187934296929268","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma11_g15290 | 2 | 1 | RNA and ribosome biogenesis | GO:0001522 | pseudouridine synthesis;GO:0008033 | tRNA processing | 2 | Biological Process: pseudouridine synthesis (GO:0001522);; Molecular Function: RNA binding (GO:0003723);; Cellular Component: plastid (GO:0009536);; Molecular Function: pseudouridine synthase activity (GO:0009982);;  | Putative tRNA pseudouridine synthase | PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like [Musa acuminata subsp. malaccensis] | 2.18667628918057 | 1.4027751534098 | 7.73329907158715e-05 | -0.231561932625822 | -0.219772374654881 | 0.434289723278815 | -0.340091932690441 | -0.307667408035617 | 0.514384002321068 | -0.266951909451167 | -0.253015923597679 | 0.38866242105682 | -0.337280352291345 | -0.322115890813943 | 0.187934296929268 | True | True


record_id: DS057_R00069
dataset_id: DS057
record_json:
{"gene_id":"Ma11_g19930","robust_pathway_count":"2","robust_module_count":"1","modules":"RNA and ribosome biogenesis","pathways":"GO:0005730 | nucleolus;GO:0006364 | rRNA processing","all_three_pathway_count":"2","GO_annotation":"Biological Process: ribosomal large subunit assembly (GO:0000027);; Biological Process: maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (GO:0000463);; Cellular Component: nucleolus (GO:0005730);; Molecular Function: rRNA binding (GO:0019843);; ","Swiss_Prot_annotation":"Ribosome production factor 2 homolog","NR_annotation":"PREDICTED: ribosome production factor 2 homolog [Musa acuminata subsp. malaccensis]","recovery_log2fc":"1.11000942793879","recovery_shrunk_log2fc":"0.414329856224006","recovery_padj":"0.518153119052386","reciprocal_log2fc":"-0.753794460596739","reciprocal_shrunk_log2fc":"-0.672618178720786","reciprocal_padj":"0.0426235889300793","exclude_pair_log2fc":"-0.881854249311419","exclude_pair_shrunk_log2fc":"-0.772508405715036","exclude_pair_padj":"0.0573711266692718","five_traceable_log2fc":"-0.930829255817113","five_traceable_shrunk_log2fc":"-0.857083018918697","five_traceable_padj":"0.0037504592758807","paper_counts_log2fc":"-1.03863585482997","paper_counts_shrunk_log2fc":"-0.981731218966788","paper_counts_padj":"3.08933529531949e-05","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma11_g19930 | 2 | 1 | RNA and ribosome biogenesis | GO:0005730 | nucleolus;GO:0006364 | rRNA processing | 2 | Biological Process: ribosomal large subunit assembly (GO:0000027);; Biological Process: maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (GO:0000463);; Cellular Component: nucleolus (GO:0005730);; Molecular Function: rRNA binding (GO:0019843);;  | Ribosome production factor 2 homolog | PREDICTED: ribosome production factor 2 homolog [Musa acuminata subsp. malaccensis] | 1.11000942793879 | 0.414329856224006 | 0.518153119052386 | -0.753794460596739 | -0.672618178720786 | 0.0426235889300793 | -0.881854249311419 | -0.772508405715036 | 0.0573711266692718 | -0.930829255817113 | -0.857083018918697 | 0.0037504592758807 | -1.03863585482997 | -0.981731218966788 | 3.08933529531949e-05 | True | True


record_id: DS057_R00070
dataset_id: DS057
record_json:
{"gene_id":"Ma04_g22280","robust_pathway_count":"2","robust_module_count":"1","modules":"RNA and ribosome biogenesis","pathways":"GO:0006353 | DNA-templated transcription termination;GO:0006364 | rRNA processing","all_three_pathway_count":"1","GO_annotation":"--","Swiss_Prot_annotation":"5&apos;-3&apos; exoribonuclease 4","NR_annotation":"PREDICTED: 5&apos;-3&apos; exoribonuclease 4-like [Musa acuminata subsp. malaccensis]","recovery_log2fc":"0.998739853326678","recovery_shrunk_log2fc":"0.236013424859947","recovery_padj":"0.742678567350574","reciprocal_log2fc":"-0.488354431800856","reciprocal_shrunk_log2fc":"-0.467841417618252","reciprocal_padj":"0.0266148912916221","exclude_pair_log2fc":"-0.5940953496476","exclude_pair_shrunk_log2fc":"-0.549438376159651","exclude_pair_padj":"0.1027490833915","five_traceable_log2fc":"-0.581224961965757","five_traceable_shrunk_log2fc":"-0.562765739106046","five_traceable_padj":"0.0032492172040266","paper_counts_log2fc":"-0.3896161357712","paper_counts_shrunk_log2fc":"-0.384934018552733","paper_counts_padj":"0.0008254003345239","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma04_g22280 | 2 | 1 | RNA and ribosome biogenesis | GO:0006353 | DNA-templated transcription termination;GO:0006364 | rRNA processing | 1 | -- | 5&apos;-3&apos; exoribonuclease 4 | PREDICTED: 5&apos;-3&apos; exoribonuclease 4-like [Musa acuminata subsp. malaccensis] | 0.998739853326678 | 0.236013424859947 | 0.742678567350574 | -0.488354431800856 | -0.467841417618252 | 0.0266148912916221 | -0.5940953496476 | -0.549438376159651 | 0.1027490833915 | -0.581224961965757 | -0.562765739106046 | 0.0032492172040266 | -0.3896161357712 | -0.384934018552733 | 0.0008254003345239 | True | True


record_id: DS057_R00071
dataset_id: DS057
record_json:
{"gene_id":"Ma01_g02270","robust_pathway_count":"1","robust_module_count":"1","modules":"RNA and ribosome biogenesis","pathways":"GO:0008033 | tRNA processing","all_three_pathway_count":"1","GO_annotation":"--","Swiss_Prot_annotation":"tRNA dimethylallyltransferase 9","NR_annotation":"PREDICTED: tRNA dimethylallyltransferase 9 isoform X1 [Musa acuminata subsp. malaccensis] ","recovery_log2fc":"1.16505734812405","recovery_shrunk_log2fc":"0.757589867138308","recovery_padj":"0.092853532517194","reciprocal_log2fc":"-0.706396537759287","reciprocal_shrunk_log2fc":"-0.650313170160425","reciprocal_padj":"0.0213384646326455","exclude_pair_log2fc":"-0.865302100057578","exclude_pair_shrunk_log2fc":"-0.761134809480797","exclude_pair_padj":"0.0580978398951877","five_traceable_log2fc":"-0.841443779822702","five_traceable_shrunk_log2fc":"-0.79058020341977","five_traceable_padj":"0.0022514803395479","paper_counts_log2fc":"-2.52024887150493","paper_counts_shrunk_log2fc":"-0.689440628976657","paper_counts_padj":"0.181332690187967","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma01_g02270 | 1 | 1 | RNA and ribosome biogenesis | GO:0008033 | tRNA processing | 1 | -- | tRNA dimethylallyltransferase 9 | PREDICTED: tRNA dimethylallyltransferase 9 isoform X1 [Musa acuminata subsp. malaccensis]  | 1.16505734812405 | 0.757589867138308 | 0.092853532517194 | -0.706396537759287 | -0.650313170160425 | 0.0213384646326455 | -0.865302100057578 | -0.761134809480797 | 0.0580978398951877 | -0.841443779822702 | -0.79058020341977 | 0.0022514803395479 | -2.52024887150493 | -0.689440628976657 | 0.181332690187967 | True | True


record_id: DS057_R00072
dataset_id: DS057
record_json:
{"gene_id":"Ma01_g08740","robust_pathway_count":"1","robust_module_count":"1","modules":"Lipid-ethylene metabolism","pathways":"GO:0006631 | fatty acid metabolic process","all_three_pathway_count":"1","GO_annotation":"Molecular Function: acetyl-CoA C-acyltransferase activity (GO:0003988);; Biological Process: metabolic process (GO:0008152);; ","Swiss_Prot_annotation":"3-ketoacyl-CoA thiolase 2, peroxisomal","NR_annotation":"PREDICTED: 3-ketoacyl-CoA thiolase 2, peroxisomal-like [Musa acuminata subsp. malaccensis]","recovery_log2fc":"-0.594761166262179","recovery_shrunk_log2fc":"-0.430977367956928","recovery_padj":"0.447225609985829","reciprocal_log2fc":"0.639239034934822","reciprocal_shrunk_log2fc":"0.581192426128518","reciprocal_padj":"0.0624630737528024","exclude_pair_log2fc":"0.692409607775615","exclude_pair_shrunk_log2fc":"0.617570573757081","exclude_pair_padj":"0.125217618641156","five_traceable_log2fc":"0.793134316896047","five_traceable_shrunk_log2fc":"0.732197396051008","five_traceable_padj":"0.0137217803026489","paper_counts_log2fc":"0.631656245509627","paper_counts_shrunk_log2fc":"0.613394043198701","paper_counts_padj":"0.000505508280956","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma01_g08740 | 1 | 1 | Lipid-ethylene metabolism | GO:0006631 | fatty acid metabolic process | 1 | Molecular Function: acetyl-CoA C-acyltransferase activity (GO:0003988);; Biological Process: metabolic process (GO:0008152);;  | 3-ketoacyl-CoA thiolase 2, peroxisomal | PREDICTED: 3-ketoacyl-CoA thiolase 2, peroxisomal-like [Musa acuminata subsp. malaccensis] | -0.594761166262179 | -0.430977367956928 | 0.447225609985829 | 0.639239034934822 | 0.581192426128518 | 0.0624630737528024 | 0.692409607775615 | 0.617570573757081 | 0.125217618641156 | 0.793134316896047 | 0.732197396051008 | 0.0137217803026489 | 0.631656245509627 | 0.613394043198701 | 0.000505508280956 | True | True


record_id: DS057_R00073
dataset_id: DS057
record_json:
{"gene_id":"Ma01_g12630","robust_pathway_count":"1","robust_module_count":"1","modules":"RNA and ribosome biogenesis","pathways":"GO:0042254 | ribosome biogenesis","all_three_pathway_count":"1","GO_annotation":"Biological Process: ribosomal large subunit export from nucleus (GO:0000055);; Cellular Component: cell (GO:0005623);; Biological Process: actin cytoskeleton organization (GO:0030036);; Biological Process: ribosomal large subunit biogenesis (GO:0042273);; ","Swiss_Prot_annotation":"--","NR_annotation":"PREDICTED: protein SDA1 homolog [Musa acuminata subsp. malaccensis]","recovery_log2fc":"0.180374648555184","recovery_shrunk_log2fc":"0.16242006687769","recovery_padj":"0.750272544758835","reciprocal_log2fc":"-0.282127939713733","reciprocal_shrunk_log2fc":"-0.268015394159114","reciprocal_padj":"0.314076366543281","exclude_pair_log2fc":"-0.298542460476365","exclude_pair_shrunk_log2fc":"-0.272754385240523","exclude_pair_padj":"0.555279970032992","five_traceable_log2fc":"-0.241984151662766","five_traceable_shrunk_log2fc":"-0.229796359443317","five_traceable_padj":"0.431766070439213","paper_counts_log2fc":"-0.279975493272645","paper_counts_shrunk_log2fc":"-0.275944236131101","paper_counts_padj":"0.0379674868292608","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma01_g12630 | 1 | 1 | RNA and ribosome biogenesis | GO:0042254 | ribosome biogenesis | 1 | Biological Process: ribosomal large subunit export from nucleus (GO:0000055);; Cellular Component: cell (GO:0005623);; Biological Process: actin cytoskeleton organization (GO:0030036);; Biological Process: ribosomal large subunit biogenesis (GO:0042273);;  | -- | PREDICTED: protein SDA1 homolog [Musa acuminata subsp. malaccensis] | 0.180374648555184 | 0.16242006687769 | 0.750272544758835 | -0.282127939713733 | -0.268015394159114 | 0.314076366543281 | -0.298542460476365 | -0.272754385240523 | 0.555279970032992 | -0.241984151662766 | -0.229796359443317 | 0.431766070439213 | -0.279975493272645 | -0.275944236131101 | 0.0379674868292608 | True | True


record_id: DS057_R00074
dataset_id: DS057
record_json:
{"gene_id":"Ma01_g13550","robust_pathway_count":"1","robust_module_count":"1","modules":"Lipid-ethylene metabolism","pathways":"GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","all_three_pathway_count":"1","GO_annotation":"Molecular Function: L-lactate dehydrogenase activity (GO:0004459);; Cellular Component: cytoplasm (GO:0005737);; Biological Process: carbohydrate metabolic process (GO:0005975);; Biological Process: carboxylic acid metabolic process (GO:0019752);; Biological Process: oxidation-reduction process (GO:0055114);; ","Swiss_Prot_annotation":"L-lactate dehydrogenase A","NR_annotation":"PREDICTED: L-lactate dehydrogenase A-like [Musa acuminata subsp. malaccensis]","recovery_log2fc":"-3.86163174834394","recovery_shrunk_log2fc":"-0.647723142024128","recovery_padj":"0.0488742868059984","reciprocal_log2fc":"0.721264297790336","reciprocal_shrunk_log2fc":"0.628455457162672","reciprocal_padj":"0.0897466474140573","exclude_pair_log2fc":"0.954236428599029","exclude_pair_shrunk_log2fc":"0.807417943705321","exclude_pair_padj":"0.0733286733765595","five_traceable_log2fc":"0.884330275418405","five_traceable_shrunk_log2fc":"0.781368729142494","five_traceable_padj":"0.0322566790573875","paper_counts_log2fc":"1.04122531282469","paper_counts_shrunk_log2fc":"0.987953807583652","paper_counts_padj":"1.36967747315813e-05","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma01_g13550 | 1 | 1 | Lipid-ethylene metabolism | GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | 1 | Molecular Function: L-lactate dehydrogenase activity (GO:0004459);; Cellular Component: cytoplasm (GO:0005737);; Biological Process: carbohydrate metabolic process (GO:0005975);; Biological Process: carboxylic acid metabolic process (GO:0019752);; Biological Process: oxidation-reduction process (GO:0055114);;  | L-lactate dehydrogenase A | PREDICTED: L-lactate dehydrogenase A-like [Musa acuminata subsp. malaccensis] | -3.86163174834394 | -0.647723142024128 | 0.0488742868059984 | 0.721264297790336 | 0.628455457162672 | 0.0897466474140573 | 0.954236428599029 | 0.807417943705321 | 0.0733286733765595 | 0.884330275418405 | 0.781368729142494 | 0.0322566790573875 | 1.04122531282469 | 0.987953807583652 | 1.36967747315813e-05 | True | True


record_id: DS057_R00075
dataset_id: DS057
record_json:
{"gene_id":"Ma01_g16000","robust_pathway_count":"1","robust_module_count":"1","modules":"Cell cycle and microtubules","pathways":"GO:0000082 | G1/S transition of mitotic cell cycle","all_three_pathway_count":"1","GO_annotation":"--","Swiss_Prot_annotation":"Cyclin-D1-1","NR_annotation":"PREDICTED: cyclin-D2-1-like [Musa acuminata subsp. malaccensis]","recovery_log2fc":"3.84518232464242","recovery_shrunk_log2fc":"1.21974198580001","recovery_padj":"0.0008855378592914","reciprocal_log2fc":"-2.23078639240308","reciprocal_shrunk_log2fc":"-1.6243252041859","reciprocal_padj":"0.0001426023639683","exclude_pair_log2fc":"-2.33481750946177","exclude_pair_shrunk_log2fc":"-1.91765489251249","exclude_pair_padj":"1.13495145258283e-06","five_traceable_log2fc":"-2.58673046561125","five_traceable_shrunk_log2fc":"-2.13877220735264","five_traceable_padj":"3.42002411700426e-08","paper_counts_log2fc":"-2.66971116941584","paper_counts_shrunk_log2fc":"-2.53341210085137","paper_counts_padj":"2.01914043532077e-32","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma01_g16000 | 1 | 1 | Cell cycle and microtubules | GO:0000082 | G1/S transition of mitotic cell cycle | 1 | -- | Cyclin-D1-1 | PREDICTED: cyclin-D2-1-like [Musa acuminata subsp. malaccensis] | 3.84518232464242 | 1.21974198580001 | 0.0008855378592914 | -2.23078639240308 | -1.6243252041859 | 0.0001426023639683 | -2.33481750946177 | -1.91765489251249 | 1.13495145258283e-06 | -2.58673046561125 | -2.13877220735264 | 3.42002411700426e-08 | -2.66971116941584 | -2.53341210085137 | 2.01914043532077e-32 | True | True


record_id: DS057_R00076
dataset_id: DS057
record_json:
{"gene_id":"Ma01_g21550","robust_pathway_count":"1","robust_module_count":"1","modules":"Lipid-ethylene metabolism","pathways":"GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","all_three_pathway_count":"1","GO_annotation":"Molecular Function: hydroxymethylglutaryl-CoA reductase (NADPH) activity (GO:0004420);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: peroxisomal membrane (GO:0005778);; Cellular Component: endoplasmic reticulum membrane (GO:0005789);; Biological Process: isoprenoid biosynthetic process (GO:0008299);; Biological Process: coenzyme A metabolic process (GO:0015936);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: sterol biosynthetic process (GO:0016126);; Molecular Function: NADP binding (GO:0050661);; Biological Process: oxidation-reduction process (GO:0055114);; ","Swiss_Prot_annotation":"3-hydroxy-3-methylglutaryl-coenzyme A reductase 3","NR_annotation":"PREDICTED: 3-hydroxy-3-methylglutaryl-coenzyme A reductase 3-like [Musa acuminata subsp. malaccensis]","recovery_log2fc":"-1.51393627503576","recovery_shrunk_log2fc":"-0.665799175284608","recovery_padj":"0.194747120657775","reciprocal_log2fc":"1.31055347917149","reciprocal_shrunk_log2fc":"1.2285816247642","reciprocal_padj":"3.02142742594949e-08","exclude_pair_log2fc":"1.21408088089388","exclude_pair_shrunk_log2fc":"1.08854299179177","exclude_pair_padj":"0.0011975820974696","five_traceable_log2fc":"1.19229896312692","five_traceable_shrunk_log2fc":"1.13343665782875","five_traceable_padj":"2.78059458905565e-07","paper_counts_log2fc":"1.13599914554789","paper_counts_shrunk_log2fc":"1.10301990118941","paper_counts_padj":"4.9702832128861e-11","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma01_g21550 | 1 | 1 | Lipid-ethylene metabolism | GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | 1 | Molecular Function: hydroxymethylglutaryl-CoA reductase (NADPH) activity (GO:0004420);; Cellular Component: mitochondrion (GO:0005739);; Cellular Component: peroxisomal membrane (GO:0005778);; Cellular Component: endoplasmic reticulum membrane (GO:0005789);; Biological Process: isoprenoid biosynthetic process (GO:0008299);; Biological Process: coenzyme A metabolic process (GO:0015936);; Cellular Component: integral component of membrane (GO:0016021);; Biological Process: sterol biosynthetic process (GO:0016126);; Molecular Function: NADP binding (GO:0050661);; Biological Process: oxidation-reduction process (GO:0055114);;  | 3-hydroxy-3-methylglutaryl-coenzyme A reductase 3 | PREDICTED: 3-hydroxy-3-methylglutaryl-coenzyme A reductase 3-like [Musa acuminata subsp. malaccensis] | -1.51393627503576 | -0.665799175284608 | 0.194747120657775 | 1.31055347917149 | 1.2285816247642 | 3.02142742594949e-08 | 1.21408088089388 | 1.08854299179177 | 0.0011975820974696 | 1.19229896312692 | 1.13343665782875 | 2.78059458905565e-07 | 1.13599914554789 | 1.10301990118941 | 4.9702832128861e-11 | True | True


record_id: DS057_R00077
dataset_id: DS057
record_json:
{"gene_id":"Ma02_g09210","robust_pathway_count":"1","robust_module_count":"1","modules":"Lipid-ethylene metabolism","pathways":"GO:0009873 | ethylene-activated signaling pathway","all_three_pathway_count":"1","GO_annotation":"--","Swiss_Prot_annotation":"Ethylene-responsive transcription factor 1","NR_annotation":"PREDICTED: ethylene-responsive transcription factor 1-like [Musa acuminata subsp. malaccensis]","recovery_log2fc":"-0.934075524170199","recovery_shrunk_log2fc":"-0.341636142801689","recovery_padj":"0.632966224623966","reciprocal_log2fc":"1.94250441722249","reciprocal_shrunk_log2fc":"1.77575933023231","reciprocal_padj":"1.12266511622741e-12","exclude_pair_log2fc":"2.19306806361669","exclude_pair_shrunk_log2fc":"2.02600727621383","exclude_pair_padj":"5.925294679239441e-15","five_traceable_log2fc":"2.21383085454308","five_traceable_shrunk_log2fc":"2.13803409180889","five_traceable_padj":"9.82210954684198e-35","paper_counts_log2fc":"2.18163756329322","paper_counts_shrunk_log2fc":"2.11718422871723","paper_counts_padj":"3.02875747841616e-38","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma02_g09210 | 1 | 1 | Lipid-ethylene metabolism | GO:0009873 | ethylene-activated signaling pathway | 1 | -- | Ethylene-responsive transcription factor 1 | PREDICTED: ethylene-responsive transcription factor 1-like [Musa acuminata subsp. malaccensis] | -0.934075524170199 | -0.341636142801689 | 0.632966224623966 | 1.94250441722249 | 1.77575933023231 | 1.12266511622741e-12 | 2.19306806361669 | 2.02600727621383 | 5.925294679239441e-15 | 2.21383085454308 | 2.13803409180889 | 9.82210954684198e-35 | 2.18163756329322 | 2.11718422871723 | 3.02875747841616e-38 | True | True


record_id: DS057_R00078
dataset_id: DS057
record_json:
{"gene_id":"Ma02_g10860","robust_pathway_count":"1","robust_module_count":"1","modules":"Lipid-ethylene metabolism","pathways":"GO:0006633 | fatty acid biosynthetic process","all_three_pathway_count":"1","GO_annotation":"Biological Process: fatty acid biosynthetic process (GO:0006633);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: transferase activity, transferring acyl groups other than amino-acyl groups (GO:0016747);; ","Swiss_Prot_annotation":"3-ketoacyl-CoA synthase 4","NR_annotation":"PREDICTED: 3-ketoacyl-CoA synthase 4-like [Musa acuminata subsp. malaccensis]","recovery_log2fc":"-1.60057292802783","recovery_shrunk_log2fc":"-0.335991769461293","recovery_padj":"0.530294225784484","reciprocal_log2fc":"1.33275848316157","reciprocal_shrunk_log2fc":"1.13325872644605","reciprocal_padj":"0.0013047794680474","exclude_pair_log2fc":"0.975604462693557","exclude_pair_shrunk_log2fc":"0.827904848366473","exclude_pair_padj":"0.0622311715526971","five_traceable_log2fc":"1.15239429293053","five_traceable_shrunk_log2fc":"1.00382972742528","five_traceable_padj":"0.0062117906417145","paper_counts_log2fc":"1.07848282445315","paper_counts_shrunk_log2fc":"0.888215314671347","paper_counts_padj":"0.0365385500218532","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma02_g10860 | 1 | 1 | Lipid-ethylene metabolism | GO:0006633 | fatty acid biosynthetic process | 1 | Biological Process: fatty acid biosynthetic process (GO:0006633);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: transferase activity, transferring acyl groups other than amino-acyl groups (GO:0016747);;  | 3-ketoacyl-CoA synthase 4 | PREDICTED: 3-ketoacyl-CoA synthase 4-like [Musa acuminata subsp. malaccensis] | -1.60057292802783 | -0.335991769461293 | 0.530294225784484 | 1.33275848316157 | 1.13325872644605 | 0.0013047794680474 | 0.975604462693557 | 0.827904848366473 | 0.0622311715526971 | 1.15239429293053 | 1.00382972742528 | 0.0062117906417145 | 1.07848282445315 | 0.888215314671347 | 0.0365385500218532 | True | True


record_id: DS057_R00079
dataset_id: DS057
record_json:
{"gene_id":"Ma02_g12500","robust_pathway_count":"1","robust_module_count":"1","modules":"Cell cycle and microtubules","pathways":"GO:0000278 | mitotic cell cycle","all_three_pathway_count":"1","GO_annotation":"--","Swiss_Prot_annotation":"CDT1-like protein a, chloroplastic","NR_annotation":"PREDICTED: CDT1-like protein a, chloroplastic [Musa acuminata subsp. malaccensis] ","recovery_log2fc":"1.58661605406728","recovery_shrunk_log2fc":"0.529683919542334","recovery_padj":"0.319618492681699","reciprocal_log2fc":"-0.950758471491488","reciprocal_shrunk_log2fc":"-0.8844957960635","reciprocal_padj":"0.0003675653723902","exclude_pair_log2fc":"-0.990994393494489","exclude_pair_shrunk_log2fc":"-0.879317327964065","exclude_pair_padj":"0.0180063287341917","five_traceable_log2fc":"-0.996522486155259","five_traceable_shrunk_log2fc":"-0.926849400913534","five_traceable_padj":"0.0006974189154573","paper_counts_log2fc":"-0.919172997215301","paper_counts_shrunk_log2fc":"-0.877867481961629","paper_counts_padj":"4.38382156494485e-05","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma02_g12500 | 1 | 1 | Cell cycle and microtubules | GO:0000278 | mitotic cell cycle | 1 | -- | CDT1-like protein a, chloroplastic | PREDICTED: CDT1-like protein a, chloroplastic [Musa acuminata subsp. malaccensis]  | 1.58661605406728 | 0.529683919542334 | 0.319618492681699 | -0.950758471491488 | -0.8844957960635 | 0.0003675653723902 | -0.990994393494489 | -0.879317327964065 | 0.0180063287341917 | -0.996522486155259 | -0.926849400913534 | 0.0006974189154573 | -0.919172997215301 | -0.877867481961629 | 4.38382156494485e-05 | True | True


record_id: DS057_R00080
dataset_id: DS057
record_json:
{"gene_id":"Ma02_g14220","robust_pathway_count":"1","robust_module_count":"1","modules":"Cell cycle and microtubules","pathways":"GO:0005874 | microtubule","all_three_pathway_count":"1","GO_annotation":"Molecular Function: GTPase activity (GO:0003924);; Molecular Function: structural constituent of cytoskeleton (GO:0005200);; Molecular Function: GTP binding (GO:0005525);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: microtubule (GO:0005874);; Biological Process: microtubule-based movement (GO:0007018);; ","Swiss_Prot_annotation":"Tubulin alpha-6 chain","NR_annotation":"PREDICTED: tubulin alpha-3 chain-like [Musa acuminata subsp. malaccensis]","recovery_log2fc":"0.162060671199163","recovery_shrunk_log2fc":"0.147912978820841","recovery_padj":"0.760949961464159","reciprocal_log2fc":"-0.318664642750529","reciprocal_shrunk_log2fc":"-0.310199163700204","reciprocal_padj":"0.0791416857679878","exclude_pair_log2fc":"-0.277473531535283","exclude_pair_shrunk_log2fc":"-0.260140544201954","exclude_pair_padj":"0.500244891378122","five_traceable_log2fc":"-0.262875325772922","five_traceable_shrunk_log2fc":"-0.256687702221716","five_traceable_padj":"0.166493326928566","paper_counts_log2fc":"-0.26849294706137","paper_counts_shrunk_log2fc":"-0.266353125474967","paper_counts_padj":"0.0054358607100408","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma02_g14220 | 1 | 1 | Cell cycle and microtubules | GO:0005874 | microtubule | 1 | Molecular Function: GTPase activity (GO:0003924);; Molecular Function: structural constituent of cytoskeleton (GO:0005200);; Molecular Function: GTP binding (GO:0005525);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: microtubule (GO:0005874);; Biological Process: microtubule-based movement (GO:0007018);;  | Tubulin alpha-6 chain | PREDICTED: tubulin alpha-3 chain-like [Musa acuminata subsp. malaccensis] | 0.162060671199163 | 0.147912978820841 | 0.760949961464159 | -0.318664642750529 | -0.310199163700204 | 0.0791416857679878 | -0.277473531535283 | -0.260140544201954 | 0.500244891378122 | -0.262875325772922 | -0.256687702221716 | 0.166493326928566 | -0.26849294706137 | -0.266353125474967 | 0.0054358607100408 | True | True


record_id: DS057_R00081
dataset_id: DS057
record_json:
{"gene_id":"Ma02_g23450","robust_pathway_count":"1","robust_module_count":"1","modules":"Lipid-ethylene metabolism","pathways":"GO:0006633 | fatty acid biosynthetic process","all_three_pathway_count":"1","GO_annotation":"Biological Process: fatty acid biosynthetic process (GO:0006633);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: transferase activity, transferring acyl groups other than amino-acyl groups (GO:0016747);; ","Swiss_Prot_annotation":"3-ketoacyl-CoA synthase 6","NR_annotation":"PREDICTED: 3-ketoacyl-CoA synthase 6-like [Musa acuminata subsp. malaccensis]","recovery_log2fc":"-2.4899852768486","recovery_shrunk_log2fc":"-0.262627601314681","recovery_padj":"0.494588779569395","reciprocal_log2fc":"1.23264770891315","reciprocal_shrunk_log2fc":"1.0574190423728","reciprocal_padj":"0.0023958451281843","exclude_pair_log2fc":"0.947282878988311","exclude_pair_shrunk_log2fc":"0.822489792235562","exclude_pair_padj":"0.0466404535751821","five_traceable_log2fc":"0.970423391130379","five_traceable_shrunk_log2fc":"0.899391277507166","five_traceable_padj":"0.0013078043123213","paper_counts_log2fc":"1.04124911703851","paper_counts_shrunk_log2fc":"1.00687618862023","paper_counts_padj":"2.43281768195958e-08","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma02_g23450 | 1 | 1 | Lipid-ethylene metabolism | GO:0006633 | fatty acid biosynthetic process | 1 | Biological Process: fatty acid biosynthetic process (GO:0006633);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: transferase activity, transferring acyl groups other than amino-acyl groups (GO:0016747);;  | 3-ketoacyl-CoA synthase 6 | PREDICTED: 3-ketoacyl-CoA synthase 6-like [Musa acuminata subsp. malaccensis] | -2.4899852768486 | -0.262627601314681 | 0.494588779569395 | 1.23264770891315 | 1.0574190423728 | 0.0023958451281843 | 0.947282878988311 | 0.822489792235562 | 0.0466404535751821 | 0.970423391130379 | 0.899391277507166 | 0.0013078043123213 | 1.04124911703851 | 1.00687618862023 | 2.43281768195958e-08 | True | True


record_id: DS057_R00082
dataset_id: DS057
record_json:
{"gene_id":"Ma03_g05720","robust_pathway_count":"1","robust_module_count":"1","modules":"Lipid-ethylene metabolism","pathways":"GO:0009873 | ethylene-activated signaling pathway","all_three_pathway_count":"1","GO_annotation":"Molecular Function: DNA binding (GO:0003677);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; ","Swiss_Prot_annotation":"Ethylene-responsive transcription factor 1","NR_annotation":"PREDICTED: ethylene-responsive transcription factor 1-like [Musa acuminata subsp. malaccensis]","recovery_log2fc":"-1.35714072192343","recovery_shrunk_log2fc":"-0.2950668643303","recovery_padj":"0.621941506388217","reciprocal_log2fc":"1.04648214903809","reciprocal_shrunk_log2fc":"0.98638013739945","reciprocal_padj":"6.80376775647399e-06","exclude_pair_log2fc":"1.21339232934363","exclude_pair_shrunk_log2fc":"1.11518713743282","exclude_pair_padj":"0.000138391169916","five_traceable_log2fc":"1.17982815479079","five_traceable_shrunk_log2fc":"1.12901759844647","five_traceable_padj":"3.8616610211122e-08","paper_counts_log2fc":"1.1497527928484","paper_counts_shrunk_log2fc":"1.11618608656296","paper_counts_padj":"3.22747955194696e-11","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma03_g05720 | 1 | 1 | Lipid-ethylene metabolism | GO:0009873 | ethylene-activated signaling pathway | 1 | Molecular Function: DNA binding (GO:0003677);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);;  | Ethylene-responsive transcription factor 1 | PREDICTED: ethylene-responsive transcription factor 1-like [Musa acuminata subsp. malaccensis] | -1.35714072192343 | -0.2950668643303 | 0.621941506388217 | 1.04648214903809 | 0.98638013739945 | 6.80376775647399e-06 | 1.21339232934363 | 1.11518713743282 | 0.000138391169916 | 1.17982815479079 | 1.12901759844647 | 3.8616610211122e-08 | 1.1497527928484 | 1.11618608656296 | 3.22747955194696e-11 | True | True


record_id: DS057_R00083
dataset_id: DS057
record_json:
{"gene_id":"Ma03_g06670","robust_pathway_count":"1","robust_module_count":"1","modules":"Cell cycle and microtubules","pathways":"GO:0000082 | G1/S transition of mitotic cell cycle","all_three_pathway_count":"1","GO_annotation":"Cellular Component: nucleus (GO:0005634);; ","Swiss_Prot_annotation":"Cyclin-D3-1","NR_annotation":"PREDICTED: cyclin-D3-1-like isoform X2 [Musa acuminata subsp. malaccensis]","recovery_log2fc":"0.72339434572051","recovery_shrunk_log2fc":"0.181839391291565","recovery_padj":"0.827396502319684","reciprocal_log2fc":"-0.974941634407249","reciprocal_shrunk_log2fc":"-0.871581759456978","reciprocal_padj":"0.0051757880573098","exclude_pair_log2fc":"-0.970704220391063","exclude_pair_shrunk_log2fc":"-0.828170909938483","exclude_pair_padj":"0.0580237173549912","five_traceable_log2fc":"-1.08144696893265","five_traceable_shrunk_log2fc":"-0.974842066270579","five_traceable_padj":"0.0027386739470972","paper_counts_log2fc":"-0.927897432817509","paper_counts_shrunk_log2fc":"-0.855340979217925","paper_counts_padj":"0.0029009233825097","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma03_g06670 | 1 | 1 | Cell cycle and microtubules | GO:0000082 | G1/S transition of mitotic cell cycle | 1 | Cellular Component: nucleus (GO:0005634);;  | Cyclin-D3-1 | PREDICTED: cyclin-D3-1-like isoform X2 [Musa acuminata subsp. malaccensis] | 0.72339434572051 | 0.181839391291565 | 0.827396502319684 | -0.974941634407249 | -0.871581759456978 | 0.0051757880573098 | -0.970704220391063 | -0.828170909938483 | 0.0580237173549912 | -1.08144696893265 | -0.974842066270579 | 0.0027386739470972 | -0.927897432817509 | -0.855340979217925 | 0.0029009233825097 | True | True


record_id: DS057_R00084
dataset_id: DS057
record_json:
{"gene_id":"Ma03_g07360","robust_pathway_count":"1","robust_module_count":"1","modules":"RNA and ribosome biogenesis","pathways":"GO:0005730 | nucleolus","all_three_pathway_count":"1","GO_annotation":"--","Swiss_Prot_annotation":"Nucleolar complex protein 2 homolog","NR_annotation":"PREDICTED: nucleolar complex protein 2 homolog [Musa acuminata subsp. malaccensis] ","recovery_log2fc":"0.656680127893952","recovery_shrunk_log2fc":"0.47615808126601","recovery_padj":"0.373044672092657","reciprocal_log2fc":"-0.449613716573052","reciprocal_shrunk_log2fc":"-0.42105087254049","reciprocal_padj":"0.126290710395657","exclude_pair_log2fc":"-0.589870731189363","exclude_pair_shrunk_log2fc":"-0.53696093968224","exclude_pair_padj":"0.155862040396108","five_traceable_log2fc":"-0.574511949560054","five_traceable_shrunk_log2fc":"-0.54728555806248","five_traceable_padj":"0.0229302580920166","paper_counts_log2fc":"-0.553642579538617","paper_counts_shrunk_log2fc":"-0.541149524567488","paper_counts_padj":"0.0005414023739437","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma03_g07360 | 1 | 1 | RNA and ribosome biogenesis | GO:0005730 | nucleolus | 1 | -- | Nucleolar complex protein 2 homolog | PREDICTED: nucleolar complex protein 2 homolog [Musa acuminata subsp. malaccensis]  | 0.656680127893952 | 0.47615808126601 | 0.373044672092657 | -0.449613716573052 | -0.42105087254049 | 0.126290710395657 | -0.589870731189363 | -0.53696093968224 | 0.155862040396108 | -0.574511949560054 | -0.54728555806248 | 0.0229302580920166 | -0.553642579538617 | -0.541149524567488 | 0.0005414023739437 | True | True


record_id: DS057_R00085
dataset_id: DS057
record_json:
{"gene_id":"Ma03_g07770","robust_pathway_count":"1","robust_module_count":"1","modules":"Lipid-ethylene metabolism","pathways":"GO:0006633 | fatty acid biosynthetic process","all_three_pathway_count":"1","GO_annotation":"Cellular Component: plastid (GO:0009536);; Molecular Function: linoleate 13S-lipoxygenase activity (GO:0016165);; Biological Process: oxylipin biosynthetic process (GO:0031408);; Molecular Function: metal ion binding (GO:0046872);; Biological Process: oxidation-reduction process (GO:0055114);; ","Swiss_Prot_annotation":"Putative lipoxygenase 5","NR_annotation":"PREDICTED: putative lipoxygenase 5 [Musa acuminata subsp. malaccensis]","recovery_log2fc":"-7.12000195517375","recovery_shrunk_log2fc":"-0.17535882716772","recovery_padj":"0.0959857655983323","reciprocal_log2fc":"1.15387913152767","reciprocal_shrunk_log2fc":"0.925293029962568","reciprocal_padj":"0.0270927938966519","exclude_pair_log2fc":"0.902702649301786","exclude_pair_shrunk_log2fc":"0.711741408723936","exclude_pair_padj":"0.198218449117834","five_traceable_log2fc":"0.906564345833854","five_traceable_shrunk_log2fc":"0.764596715385073","five_traceable_padj":"0.071164956009085","paper_counts_log2fc":"1.18937696506254","paper_counts_shrunk_log2fc":"1.08626804386906","paper_counts_padj":"0.0002227594000548","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma03_g07770 | 1 | 1 | Lipid-ethylene metabolism | GO:0006633 | fatty acid biosynthetic process | 1 | Cellular Component: plastid (GO:0009536);; Molecular Function: linoleate 13S-lipoxygenase activity (GO:0016165);; Biological Process: oxylipin biosynthetic process (GO:0031408);; Molecular Function: metal ion binding (GO:0046872);; Biological Process: oxidation-reduction process (GO:0055114);;  | Putative lipoxygenase 5 | PREDICTED: putative lipoxygenase 5 [Musa acuminata subsp. malaccensis] | -7.12000195517375 | -0.17535882716772 | 0.0959857655983323 | 1.15387913152767 | 0.925293029962568 | 0.0270927938966519 | 0.902702649301786 | 0.711741408723936 | 0.198218449117834 | 0.906564345833854 | 0.764596715385073 | 0.071164956009085 | 1.18937696506254 | 1.08626804386906 | 0.0002227594000548 | True | True


record_id: DS057_R00086
dataset_id: DS057
record_json:
{"gene_id":"Ma03_g08350","robust_pathway_count":"1","robust_module_count":"1","modules":"RNA and ribosome biogenesis","pathways":"GO:0008033 | tRNA processing","all_three_pathway_count":"1","GO_annotation":"Molecular Function: tRNA (adenine-N1-)-methyltransferase activity (GO:0016429);; Biological Process: tRNA methylation (GO:0030488);; Cellular Component: tRNA (m1A) methyltransferase complex (GO:0031515);; ","Swiss_Prot_annotation":"--","NR_annotation":"PREDICTED: tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A [Musa acuminata subsp. malaccensis]","recovery_log2fc":"1.16736331873123","recovery_shrunk_log2fc":"0.567899874971757","recovery_padj":"0.320553910069515","reciprocal_log2fc":"-0.957210295804645","reciprocal_shrunk_log2fc":"-0.785328817881202","reciprocal_padj":"0.0590557803220227","exclude_pair_log2fc":"-1.14234040012273","exclude_pair_shrunk_log2fc":"-0.926083105752474","exclude_pair_padj":"0.0549660221267963","five_traceable_log2fc":"-1.20139436405466","five_traceable_shrunk_log2fc":"-1.05094095604884","five_traceable_padj":"0.0038128922461732","paper_counts_log2fc":"-1.2075803260652","paper_counts_shrunk_log2fc":"-1.14480293172753","paper_counts_padj":"4.18018636189517e-07","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma03_g08350 | 1 | 1 | RNA and ribosome biogenesis | GO:0008033 | tRNA processing | 1 | Molecular Function: tRNA (adenine-N1-)-methyltransferase activity (GO:0016429);; Biological Process: tRNA methylation (GO:0030488);; Cellular Component: tRNA (m1A) methyltransferase complex (GO:0031515);;  | -- | PREDICTED: tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A [Musa acuminata subsp. malaccensis] | 1.16736331873123 | 0.567899874971757 | 0.320553910069515 | -0.957210295804645 | -0.785328817881202 | 0.0590557803220227 | -1.14234040012273 | -0.926083105752474 | 0.0549660221267963 | -1.20139436405466 | -1.05094095604884 | 0.0038128922461732 | -1.2075803260652 | -1.14480293172753 | 4.18018636189517e-07 | True | True


record_id: DS057_R00087
dataset_id: DS057
record_json:
{"gene_id":"Ma03_g09900","robust_pathway_count":"1","robust_module_count":"1","modules":"Lipid-ethylene metabolism","pathways":"GO:0009873 | ethylene-activated signaling pathway","all_three_pathway_count":"1","GO_annotation":"Biological Process: transcription, DNA-templated (GO:0006351);; ","Swiss_Prot_annotation":"Ethylene-responsive transcription factor 1","NR_annotation":"PREDICTED: ethylene-responsive transcription factor 1-like [Musa acuminata subsp. malaccensis] ","recovery_log2fc":"-0.595294488321953","recovery_shrunk_log2fc":"-0.439216302008715","recovery_padj":"0.424578587677605","reciprocal_log2fc":"0.796137273297005","reciprocal_shrunk_log2fc":"0.759387856654861","reciprocal_padj":"0.0001869488210839","exclude_pair_log2fc":"0.794277230438864","exclude_pair_shrunk_log2fc":"0.733673147059898","exclude_pair_padj":"0.0189129629413153","five_traceable_log2fc":"0.859673237208513","five_traceable_shrunk_log2fc":"0.822128495989469","five_traceable_padj":"0.0001340419676164","paper_counts_log2fc":"0.808121686803391","paper_counts_shrunk_log2fc":"0.790685830297886","paper_counts_padj":"7.96699787054103e-08","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma03_g09900 | 1 | 1 | Lipid-ethylene metabolism | GO:0009873 | ethylene-activated signaling pathway | 1 | Biological Process: transcription, DNA-templated (GO:0006351);;  | Ethylene-responsive transcription factor 1 | PREDICTED: ethylene-responsive transcription factor 1-like [Musa acuminata subsp. malaccensis]  | -0.595294488321953 | -0.439216302008715 | 0.424578587677605 | 0.796137273297005 | 0.759387856654861 | 0.0001869488210839 | 0.794277230438864 | 0.733673147059898 | 0.0189129629413153 | 0.859673237208513 | 0.822128495989469 | 0.0001340419676164 | 0.808121686803391 | 0.790685830297886 | 7.96699787054103e-08 | True | True


record_id: DS057_R00088
dataset_id: DS057
record_json:
{"gene_id":"Ma03_g12840","robust_pathway_count":"1","robust_module_count":"1","modules":"Lipid-ethylene metabolism","pathways":"GO:0009873 | ethylene-activated signaling pathway","all_three_pathway_count":"1","GO_annotation":"Biological Process: transcription, DNA-templated (GO:0006351);; ","Swiss_Prot_annotation":"Ethylene-responsive transcription factor ERF011","NR_annotation":"PREDICTED: ethylene-responsive transcription factor RAP2-9-like [Musa acuminata subsp. malaccensis]","recovery_log2fc":"-0.708211631564085","recovery_shrunk_log2fc":"-0.384937320111484","recovery_padj":"0.583051795291309","reciprocal_log2fc":"2.74057913431925","reciprocal_shrunk_log2fc":"1.77924729684574","reciprocal_padj":"0.000103650546088","exclude_pair_log2fc":"3.49927483007653","exclude_pair_shrunk_log2fc":"2.06270881806605","exclude_pair_padj":"8.27341349189837e-05","five_traceable_log2fc":"3.3135829742397","five_traceable_shrunk_log2fc":"2.205270908623","five_traceable_padj":"5.94797138705348e-06","paper_counts_log2fc":"3.38338597701294","paper_counts_shrunk_log2fc":"2.55705081845971","paper_counts_padj":"3.3716603421548905e-09","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma03_g12840 | 1 | 1 | Lipid-ethylene metabolism | GO:0009873 | ethylene-activated signaling pathway | 1 | Biological Process: transcription, DNA-templated (GO:0006351);;  | Ethylene-responsive transcription factor ERF011 | PREDICTED: ethylene-responsive transcription factor RAP2-9-like [Musa acuminata subsp. malaccensis] | -0.708211631564085 | -0.384937320111484 | 0.583051795291309 | 2.74057913431925 | 1.77924729684574 | 0.000103650546088 | 3.49927483007653 | 2.06270881806605 | 8.27341349189837e-05 | 3.3135829742397 | 2.205270908623 | 5.94797138705348e-06 | 3.38338597701294 | 2.55705081845971 | 3.3716603421548905e-09 | True | True


record_id: DS057_R00089
dataset_id: DS057
record_json:
{"gene_id":"Ma03_g20870","robust_pathway_count":"1","robust_module_count":"1","modules":"RNA and ribosome biogenesis","pathways":"GO:0008033 | tRNA processing","all_three_pathway_count":"1","GO_annotation":"Cellular Component: mitochondrion (GO:0005739);; ","Swiss_Prot_annotation":"--","NR_annotation":"PREDICTED: thyroid adenoma-associated protein homolog [Musa acuminata subsp. malaccensis] ","recovery_log2fc":"0.927097753280224","recovery_shrunk_log2fc":"0.557798805555624","recovery_padj":"0.320553910069515","reciprocal_log2fc":"-0.309945630462268","reciprocal_shrunk_log2fc":"-0.288808339327576","reciprocal_padj":"0.354942272129972","exclude_pair_log2fc":"-0.428487003620181","exclude_pair_shrunk_log2fc":"-0.383334581150772","exclude_pair_padj":"0.411902890557771","five_traceable_log2fc":"-0.354481965612028","five_traceable_shrunk_log2fc":"-0.330242673005596","five_traceable_padj":"0.308195382689888","paper_counts_log2fc":"-0.163754372065727","paper_counts_shrunk_log2fc":"-0.15360661201169","paper_counts_padj":"0.635633441752126","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma03_g20870 | 1 | 1 | RNA and ribosome biogenesis | GO:0008033 | tRNA processing | 1 | Cellular Component: mitochondrion (GO:0005739);;  | -- | PREDICTED: thyroid adenoma-associated protein homolog [Musa acuminata subsp. malaccensis]  | 0.927097753280224 | 0.557798805555624 | 0.320553910069515 | -0.309945630462268 | -0.288808339327576 | 0.354942272129972 | -0.428487003620181 | -0.383334581150772 | 0.411902890557771 | -0.354481965612028 | -0.330242673005596 | 0.308195382689888 | -0.163754372065727 | -0.15360661201169 | 0.635633441752126 | True | True


record_id: DS057_R00090
dataset_id: DS057
record_json:
{"gene_id":"Ma03_g22710","robust_pathway_count":"1","robust_module_count":"1","modules":"RNA and ribosome biogenesis","pathways":"GO:0005730 | nucleolus","all_three_pathway_count":"1","GO_annotation":"Molecular Function: RNA binding (GO:0003723);; ","Swiss_Prot_annotation":"--","NR_annotation":"PREDICTED: putative ribosome biogenesis protein C8F11.04 [Musa acuminata subsp. malaccensis]","recovery_log2fc":"0.631981964650657","recovery_shrunk_log2fc":"0.425794746778428","recovery_padj":"0.484767203684351","reciprocal_log2fc":"-0.318354168511902","reciprocal_shrunk_log2fc":"-0.287023904579497","reciprocal_padj":"0.455797849188976","exclude_pair_log2fc":"-0.48804195949153","exclude_pair_shrunk_log2fc":"-0.449399542610443","exclude_pair_padj":"0.22717611928173","five_traceable_log2fc":"-0.541401948028003","five_traceable_shrunk_log2fc":"-0.51911303422131","five_traceable_padj":"0.0207211243561292","paper_counts_log2fc":"-0.540991835234596","paper_counts_shrunk_log2fc":"-0.529048772123514","paper_counts_padj":"0.0006360723308677","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma03_g22710 | 1 | 1 | RNA and ribosome biogenesis | GO:0005730 | nucleolus | 1 | Molecular Function: RNA binding (GO:0003723);;  | -- | PREDICTED: putative ribosome biogenesis protein C8F11.04 [Musa acuminata subsp. malaccensis] | 0.631981964650657 | 0.425794746778428 | 0.484767203684351 | -0.318354168511902 | -0.287023904579497 | 0.455797849188976 | -0.48804195949153 | -0.449399542610443 | 0.22717611928173 | -0.541401948028003 | -0.51911303422131 | 0.0207211243561292 | -0.540991835234596 | -0.529048772123514 | 0.0006360723308677 | True | True


record_id: DS057_R00091
dataset_id: DS057
record_json:
{"gene_id":"Ma03_g22880","robust_pathway_count":"1","robust_module_count":"1","modules":"RNA and ribosome biogenesis","pathways":"GO:0008033 | tRNA processing","all_three_pathway_count":"1","GO_annotation":"Biological Process: tRNA wobble uridine modification (GO:0002098);; Molecular Function: calmodulin binding (GO:0005516);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytoplasm (GO:0005737);; Biological Process: regulation of transcription from RNA polymerase II promoter (GO:0006357);; Biological Process: meristem structural organization (GO:0009933);; Biological Process: root meristem growth (GO:0010449);; Cellular Component: Elongator holoenzyme complex (GO:0033588);; Biological Process: leaf development (GO:0048366);; Biological Process: 5-carbamoylmethyl uridine residue modification (GO:0080178);; ","Swiss_Prot_annotation":"Protein KTI12 homolog","NR_annotation":"PREDICTED: protein KTI12 homolog isoform X2 [Musa acuminata subsp. malaccensis]","recovery_log2fc":"0.634839859208766","recovery_shrunk_log2fc":"0.44008723254967","recovery_padj":"0.452302565817462","reciprocal_log2fc":"-0.364009604861287","reciprocal_shrunk_log2fc":"-0.333461239104348","reciprocal_padj":"0.32694468659598","exclude_pair_log2fc":"-0.546853935445511","exclude_pair_shrunk_log2fc":"-0.500772257271064","exclude_pair_padj":"0.179279317850272","five_traceable_log2fc":"-0.559382701227566","five_traceable_shrunk_log2fc":"-0.539193707325605","five_traceable_padj":"0.0091604403736751","paper_counts_log2fc":"-0.503902279053233","paper_counts_shrunk_log2fc":"-0.479972068185239","paper_counts_padj":"0.043902169039193","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma03_g22880 | 1 | 1 | RNA and ribosome biogenesis | GO:0008033 | tRNA processing | 1 | Biological Process: tRNA wobble uridine modification (GO:0002098);; Molecular Function: calmodulin binding (GO:0005516);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: nucleus (GO:0005634);; Cellular Component: cytoplasm (GO:0005737);; Biological Process: regulation of transcription from RNA polymerase II promoter (GO:0006357);; Biological Process: meristem structural organization (GO:0009933);; Biological Process: root meristem growth (GO:0010449);; Cellular Component: Elongator holoenzyme complex (GO:0033588);; Biological Process: leaf development (GO:0048366);; Biological Process: 5-carbamoylmethyl uridine residue modification (GO:0080178);;  | Protein KTI12 homolog | PREDICTED: protein KTI12 homolog isoform X2 [Musa acuminata subsp. malaccensis] | 0.634839859208766 | 0.44008723254967 | 0.452302565817462 | -0.364009604861287 | -0.333461239104348 | 0.32694468659598 | -0.546853935445511 | -0.500772257271064 | 0.179279317850272 | -0.559382701227566 | -0.539193707325605 | 0.0091604403736751 | -0.503902279053233 | -0.479972068185239 | 0.043902169039193 | True | True


record_id: DS057_R00092
dataset_id: DS057
record_json:
{"gene_id":"Ma03_g23580","robust_pathway_count":"1","robust_module_count":"1","modules":"Lipid-ethylene metabolism","pathways":"GO:0009873 | ethylene-activated signaling pathway","all_three_pathway_count":"1","GO_annotation":"--","Swiss_Prot_annotation":"Ethylene-responsive transcription factor ERF110","NR_annotation":"PREDICTED: ethylene-responsive transcription factor ABR1-like [Musa acuminata subsp. malaccensis]","recovery_log2fc":"-2.4316097955453","recovery_shrunk_log2fc":"-0.558168125315069","recovery_padj":"0.193027938857616","reciprocal_log2fc":"1.85368252450715","reciprocal_shrunk_log2fc":"1.66156342297226","reciprocal_padj":"1.8013378095784e-09","exclude_pair_log2fc":"1.68417489209201","exclude_pair_shrunk_log2fc":"1.40704277484224","exclude_pair_padj":"0.0004861529840652","five_traceable_log2fc":"1.6888867369274","five_traceable_shrunk_log2fc":"1.54802227234644","five_traceable_padj":"2.93963608875362e-08","paper_counts_log2fc":"1.70927190524556","paper_counts_shrunk_log2fc":"1.62864231972239","paper_counts_padj":"8.692957397166971e-15","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma03_g23580 | 1 | 1 | Lipid-ethylene metabolism | GO:0009873 | ethylene-activated signaling pathway | 1 | -- | Ethylene-responsive transcription factor ERF110 | PREDICTED: ethylene-responsive transcription factor ABR1-like [Musa acuminata subsp. malaccensis] | -2.4316097955453 | -0.558168125315069 | 0.193027938857616 | 1.85368252450715 | 1.66156342297226 | 1.8013378095784e-09 | 1.68417489209201 | 1.40704277484224 | 0.0004861529840652 | 1.6888867369274 | 1.54802227234644 | 2.93963608875362e-08 | 1.70927190524556 | 1.62864231972239 | 8.692957397166971e-15 | True | True


record_id: DS057_R00093
dataset_id: DS057
record_json:
{"gene_id":"Ma03_g25620","robust_pathway_count":"1","robust_module_count":"1","modules":"RNA and ribosome biogenesis","pathways":"GO:0006364 | rRNA processing","all_three_pathway_count":"1","GO_annotation":"Molecular Function: structural constituent of ribosome (GO:0003735);; Cellular Component: ribosome (GO:0005840);; Biological Process: translation (GO:0006412);; Molecular Function: small ribosomal subunit rRNA binding (GO:0070181);; ","Swiss_Prot_annotation":"--","NR_annotation":"PREDICTED: uncharacterized protein LOC103978926 isoform X1 [Musa acuminata subsp. malaccensis] ","recovery_log2fc":"0.757612063017136","recovery_shrunk_log2fc":"0.459537287128285","recovery_padj":"0.463261992305777","reciprocal_log2fc":"-0.535248772636895","reciprocal_shrunk_log2fc":"-0.504215543411903","reciprocal_padj":"0.0442218299614832","exclude_pair_log2fc":"-0.584199443595832","exclude_pair_shrunk_log2fc":"-0.525954424513886","exclude_pair_padj":"0.194631252794763","five_traceable_log2fc":"-0.634782893059656","five_traceable_shrunk_log2fc":"-0.604272789520774","five_traceable_padj":"0.0112228952825958","paper_counts_log2fc":"-0.699686161870996","paper_counts_shrunk_log2fc":"-0.683058454280659","paper_counts_padj":"1.37145986429067e-05","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma03_g25620 | 1 | 1 | RNA and ribosome biogenesis | GO:0006364 | rRNA processing | 1 | Molecular Function: structural constituent of ribosome (GO:0003735);; Cellular Component: ribosome (GO:0005840);; Biological Process: translation (GO:0006412);; Molecular Function: small ribosomal subunit rRNA binding (GO:0070181);;  | -- | PREDICTED: uncharacterized protein LOC103978926 isoform X1 [Musa acuminata subsp. malaccensis]  | 0.757612063017136 | 0.459537287128285 | 0.463261992305777 | -0.535248772636895 | -0.504215543411903 | 0.0442218299614832 | -0.584199443595832 | -0.525954424513886 | 0.194631252794763 | -0.634782893059656 | -0.604272789520774 | 0.0112228952825958 | -0.699686161870996 | -0.683058454280659 | 1.37145986429067e-05 | True | True


record_id: DS057_R00094
dataset_id: DS057
record_json:
{"gene_id":"Ma03_g26540","robust_pathway_count":"1","robust_module_count":"1","modules":"Cell cycle and microtubules","pathways":"GO:0000082 | G1/S transition of mitotic cell cycle","all_three_pathway_count":"1","GO_annotation":"--","Swiss_Prot_annotation":"Cyclin-A2-1","NR_annotation":"PREDICTED: cyclin-A2-1-like [Musa acuminata subsp. malaccensis] ","recovery_log2fc":"0.296845893899977","recovery_shrunk_log2fc":"0.225788944710244","recovery_padj":"0.75819746939255","reciprocal_log2fc":"-0.623770386958098","reciprocal_shrunk_log2fc":"-0.600633919394202","reciprocal_padj":"0.0013096262021227","exclude_pair_log2fc":"-0.59740731400668","exclude_pair_shrunk_log2fc":"-0.548633592374579","exclude_pair_padj":"0.121807495378969","five_traceable_log2fc":"-0.592306693778268","five_traceable_shrunk_log2fc":"-0.569567030721003","five_traceable_padj":"0.0072983759365901","paper_counts_log2fc":"-0.617451987843016","paper_counts_shrunk_log2fc":"-0.609572127613773","paper_counts_padj":"8.52977216524521e-08","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma03_g26540 | 1 | 1 | Cell cycle and microtubules | GO:0000082 | G1/S transition of mitotic cell cycle | 1 | -- | Cyclin-A2-1 | PREDICTED: cyclin-A2-1-like [Musa acuminata subsp. malaccensis]  | 0.296845893899977 | 0.225788944710244 | 0.75819746939255 | -0.623770386958098 | -0.600633919394202 | 0.0013096262021227 | -0.59740731400668 | -0.548633592374579 | 0.121807495378969 | -0.592306693778268 | -0.569567030721003 | 0.0072983759365901 | -0.617451987843016 | -0.609572127613773 | 8.52977216524521e-08 | True | True


record_id: DS057_R00095
dataset_id: DS057
record_json:
{"gene_id":"Ma04_g03400","robust_pathway_count":"1","robust_module_count":"1","modules":"Lipid-ethylene metabolism","pathways":"GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","all_three_pathway_count":"1","GO_annotation":"Molecular Function: UDP-glucose 6-dehydrogenase activity (GO:0003979);; Molecular Function: NAD binding (GO:0051287);; Biological Process: oxidation-reduction process (GO:0055114);; ","Swiss_Prot_annotation":"UDP-glucose 6-dehydrogenase 4","NR_annotation":"PREDICTED: UDP-glucose 6-dehydrogenase 4 [Musa acuminata subsp. malaccensis]","recovery_log2fc":"-2.60987155227773","recovery_shrunk_log2fc":"-0.665075740014994","recovery_padj":"0.098886430248387","reciprocal_log2fc":"0.806343012080544","reciprocal_shrunk_log2fc":"0.765747881839885","reciprocal_padj":"0.0003220588969552","exclude_pair_log2fc":"0.718867022040257","exclude_pair_shrunk_log2fc":"0.658617772455982","exclude_pair_padj":"0.0533635167564113","five_traceable_log2fc":"0.804950067163254","five_traceable_shrunk_log2fc":"0.762898355493266","five_traceable_padj":"0.001459414433975","paper_counts_log2fc":"0.924070985104403","paper_counts_shrunk_log2fc":"0.893580344698386","paper_counts_padj":"9.6077373975069e-07","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma04_g03400 | 1 | 1 | Lipid-ethylene metabolism | GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | 1 | Molecular Function: UDP-glucose 6-dehydrogenase activity (GO:0003979);; Molecular Function: NAD binding (GO:0051287);; Biological Process: oxidation-reduction process (GO:0055114);;  | UDP-glucose 6-dehydrogenase 4 | PREDICTED: UDP-glucose 6-dehydrogenase 4 [Musa acuminata subsp. malaccensis] | -2.60987155227773 | -0.665075740014994 | 0.098886430248387 | 0.806343012080544 | 0.765747881839885 | 0.0003220588969552 | 0.718867022040257 | 0.658617772455982 | 0.0533635167564113 | 0.804950067163254 | 0.762898355493266 | 0.001459414433975 | 0.924070985104403 | 0.893580344698386 | 9.6077373975069e-07 | True | True


record_id: DS057_R00096
dataset_id: DS057
record_json:
{"gene_id":"Ma04_g07080","robust_pathway_count":"1","robust_module_count":"1","modules":"Cell cycle and microtubules","pathways":"GO:0000082 | G1/S transition of mitotic cell cycle","all_three_pathway_count":"1","GO_annotation":"Cellular Component: nucleus (GO:0005634);; ","Swiss_Prot_annotation":"Cyclin-D5-3","NR_annotation":"PREDICTED: cyclin-D5-3-like isoform X1 [Musa acuminata subsp. malaccensis]","recovery_log2fc":"0.687707351240529","recovery_shrunk_log2fc":"0.180981625054645","recovery_padj":"0.830749225525096","reciprocal_log2fc":"-1.22585601812976","reciprocal_shrunk_log2fc":"-0.926767520340272","reciprocal_padj":"0.0438930089332568","exclude_pair_log2fc":"-1.26037248710568","exclude_pair_shrunk_log2fc":"-0.992133730677607","exclude_pair_padj":"0.047597318498107","five_traceable_log2fc":"-1.49465565409277","five_traceable_shrunk_log2fc":"-1.20522760377458","five_traceable_padj":"0.0059708573896019","paper_counts_log2fc":"-1.42053032269852","paper_counts_shrunk_log2fc":"-1.05088186634389","paper_counts_padj":"0.0307165359523118","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma04_g07080 | 1 | 1 | Cell cycle and microtubules | GO:0000082 | G1/S transition of mitotic cell cycle | 1 | Cellular Component: nucleus (GO:0005634);;  | Cyclin-D5-3 | PREDICTED: cyclin-D5-3-like isoform X1 [Musa acuminata subsp. malaccensis] | 0.687707351240529 | 0.180981625054645 | 0.830749225525096 | -1.22585601812976 | -0.926767520340272 | 0.0438930089332568 | -1.26037248710568 | -0.992133730677607 | 0.047597318498107 | -1.49465565409277 | -1.20522760377458 | 0.0059708573896019 | -1.42053032269852 | -1.05088186634389 | 0.0307165359523118 | True | True


record_id: DS057_R00097
dataset_id: DS057
record_json:
{"gene_id":"Ma04_g16120","robust_pathway_count":"1","robust_module_count":"1","modules":"RNA and ribosome biogenesis","pathways":"GO:0005730 | nucleolus","all_three_pathway_count":"1","GO_annotation":"--","Swiss_Prot_annotation":"Notchless protein homolog","NR_annotation":"PREDICTED: uncharacterized protein LOC103981786 isoform X2 [Musa acuminata subsp. malaccensis]","recovery_log2fc":"1.01856049943102","recovery_shrunk_log2fc":"0.530403217252475","recovery_padj":"0.376183100990436","reciprocal_log2fc":"-0.42124487328964","reciprocal_shrunk_log2fc":"-0.392064504708744","reciprocal_padj":"0.181973049012365","exclude_pair_log2fc":"-0.549306076804577","exclude_pair_shrunk_log2fc":"-0.491675787041165","exclude_pair_padj":"0.250553898636642","five_traceable_log2fc":"-0.512736996786286","five_traceable_shrunk_log2fc":"-0.480457606693381","five_traceable_padj":"0.0961833435154551","paper_counts_log2fc":"-0.504952971148389","paper_counts_shrunk_log2fc":"-0.495219931329066","paper_counts_padj":"0.000634981077693","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma04_g16120 | 1 | 1 | RNA and ribosome biogenesis | GO:0005730 | nucleolus | 1 | -- | Notchless protein homolog | PREDICTED: uncharacterized protein LOC103981786 isoform X2 [Musa acuminata subsp. malaccensis] | 1.01856049943102 | 0.530403217252475 | 0.376183100990436 | -0.42124487328964 | -0.392064504708744 | 0.181973049012365 | -0.549306076804577 | -0.491675787041165 | 0.250553898636642 | -0.512736996786286 | -0.480457606693381 | 0.0961833435154551 | -0.504952971148389 | -0.495219931329066 | 0.000634981077693 | True | True


record_id: DS057_R00098
dataset_id: DS057
record_json:
{"gene_id":"Ma04_g16550","robust_pathway_count":"1","robust_module_count":"1","modules":"Lipid-ethylene metabolism","pathways":"GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","all_three_pathway_count":"1","GO_annotation":"Biological Process: carbohydrate metabolic process (GO:0005975);; Biological Process: tricarboxylic acid cycle (GO:0006099);; Biological Process: malate metabolic process (GO:0006108);; Molecular Function: L-malate dehydrogenase activity (GO:0030060);; ","Swiss_Prot_annotation":"Malate dehydrogenase, mitochondrial","NR_annotation":"PREDICTED: malate dehydrogenase, mitochondrial [Musa acuminata subsp. malaccensis]","recovery_log2fc":"-1.17741414477454","recovery_shrunk_log2fc":"-0.691660448679961","recovery_padj":"0.165119947662691","reciprocal_log2fc":"0.677779670392934","reciprocal_shrunk_log2fc":"0.636157547339441","reciprocal_padj":"0.0097078607687272","exclude_pair_log2fc":"0.566417647576905","exclude_pair_shrunk_log2fc":"0.513850198613474","exclude_pair_padj":"0.189675009151356","five_traceable_log2fc":"0.676686852358026","five_traceable_shrunk_log2fc":"0.633803779225591","five_traceable_padj":"0.0210685895384172","paper_counts_log2fc":"0.602592502849176","paper_counts_shrunk_log2fc":"0.562694878754345","paper_counts_padj":"0.043219602653181","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma04_g16550 | 1 | 1 | Lipid-ethylene metabolism | GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | 1 | Biological Process: carbohydrate metabolic process (GO:0005975);; Biological Process: tricarboxylic acid cycle (GO:0006099);; Biological Process: malate metabolic process (GO:0006108);; Molecular Function: L-malate dehydrogenase activity (GO:0030060);;  | Malate dehydrogenase, mitochondrial | PREDICTED: malate dehydrogenase, mitochondrial [Musa acuminata subsp. malaccensis] | -1.17741414477454 | -0.691660448679961 | 0.165119947662691 | 0.677779670392934 | 0.636157547339441 | 0.0097078607687272 | 0.566417647576905 | 0.513850198613474 | 0.189675009151356 | 0.676686852358026 | 0.633803779225591 | 0.0210685895384172 | 0.602592502849176 | 0.562694878754345 | 0.043219602653181 | True | True


record_id: DS057_R00099
dataset_id: DS057
record_json:
{"gene_id":"Ma04_g18960","robust_pathway_count":"1","robust_module_count":"1","modules":"Lipid-ethylene metabolism","pathways":"GO:0006631 | fatty acid metabolic process","all_three_pathway_count":"1","GO_annotation":"Molecular Function: fatty-acyl-CoA binding (GO:0000062);; ","Swiss_Prot_annotation":"Acyl-CoA-binding protein","NR_annotation":"PREDICTED: acyl-CoA-binding protein [Musa acuminata subsp. malaccensis]","recovery_log2fc":"-0.798662764870808","recovery_shrunk_log2fc":"-0.495697956802042","recovery_padj":"0.403464709811116","reciprocal_log2fc":"1.19237612385289","reciprocal_shrunk_log2fc":"1.07819873500484","reciprocal_padj":"0.0001507872149708","exclude_pair_log2fc":"1.13760180733711","exclude_pair_shrunk_log2fc":"1.03172739378767","exclude_pair_padj":"0.0013208908015827","five_traceable_log2fc":"1.0164899167725","five_traceable_shrunk_log2fc":"0.94811366421515","five_traceable_padj":"0.0003606158774197","paper_counts_log2fc":"1.16044421299971","paper_counts_shrunk_log2fc":"1.0918669950092","paper_counts_padj":"6.63290060675495e-06","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma04_g18960 | 1 | 1 | Lipid-ethylene metabolism | GO:0006631 | fatty acid metabolic process | 1 | Molecular Function: fatty-acyl-CoA binding (GO:0000062);;  | Acyl-CoA-binding protein | PREDICTED: acyl-CoA-binding protein [Musa acuminata subsp. malaccensis] | -0.798662764870808 | -0.495697956802042 | 0.403464709811116 | 1.19237612385289 | 1.07819873500484 | 0.0001507872149708 | 1.13760180733711 | 1.03172739378767 | 0.0013208908015827 | 1.0164899167725 | 0.94811366421515 | 0.0003606158774197 | 1.16044421299971 | 1.0918669950092 | 6.63290060675495e-06 | True | True


record_id: DS057_R00100
dataset_id: DS057
record_json:
{"gene_id":"Ma04_g22320","robust_pathway_count":"1","robust_module_count":"1","modules":"Cell cycle and microtubules","pathways":"GO:0005874 | microtubule","all_three_pathway_count":"1","GO_annotation":"Biological Process: microtubule cytoskeleton organization (GO:0000226);; Biological Process: cytokinesis (GO:0000910);; Molecular Function: microtubule binding (GO:0008017);; ","Swiss_Prot_annotation":"65-kDa microtubule-associated protein 3","NR_annotation":"PREDICTED: 65-kDa microtubule-associated protein 3-like [Musa acuminata subsp. malaccensis] ","recovery_log2fc":"0.875952527073914","recovery_shrunk_log2fc":"0.323386416086439","recovery_padj":"0.662953505742523","reciprocal_log2fc":"-1.04144269104487","reciprocal_shrunk_log2fc":"-0.95437121480168","reciprocal_padj":"0.0004095881548537","exclude_pair_log2fc":"-0.885066743479917","exclude_pair_shrunk_log2fc":"-0.791793147575736","exclude_pair_padj":"0.0321055631547661","five_traceable_log2fc":"-0.856581962927509","five_traceable_shrunk_log2fc":"-0.804720272399906","five_traceable_padj":"0.0018549415000858","paper_counts_log2fc":"-0.939749132910732","paper_counts_shrunk_log2fc":"-0.898707163075233","paper_counts_padj":"2.07593768212402e-05","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma04_g22320 | 1 | 1 | Cell cycle and microtubules | GO:0005874 | microtubule | 1 | Biological Process: microtubule cytoskeleton organization (GO:0000226);; Biological Process: cytokinesis (GO:0000910);; Molecular Function: microtubule binding (GO:0008017);;  | 65-kDa microtubule-associated protein 3 | PREDICTED: 65-kDa microtubule-associated protein 3-like [Musa acuminata subsp. malaccensis]  | 0.875952527073914 | 0.323386416086439 | 0.662953505742523 | -1.04144269104487 | -0.95437121480168 | 0.0004095881548537 | -0.885066743479917 | -0.791793147575736 | 0.0321055631547661 | -0.856581962927509 | -0.804720272399906 | 0.0018549415000858 | -0.939749132910732 | -0.898707163075233 | 2.07593768212402e-05 | True | True


record_id: DS057_R00101
dataset_id: DS057
record_json:
{"gene_id":"Ma04_g22350","robust_pathway_count":"1","robust_module_count":"1","modules":"Lipid-ethylene metabolism","pathways":"GO:0006633 | fatty acid biosynthetic process","all_three_pathway_count":"1","GO_annotation":"Biological Process: fatty acid biosynthetic process (GO:0006633);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: transferase activity, transferring acyl groups other than amino-acyl groups (GO:0016747);; ","Swiss_Prot_annotation":"3-ketoacyl-CoA synthase 1","NR_annotation":"PREDICTED: 3-ketoacyl-CoA synthase 1-like [Musa acuminata subsp. malaccensis]","recovery_log2fc":"-6.39818578849146","recovery_shrunk_log2fc":"-0.068937810988285","recovery_padj":"0.457729805937014","reciprocal_log2fc":"4.535596673171","reciprocal_shrunk_log2fc":"2.33802030787552","reciprocal_padj":"5.53841880866044e-08","exclude_pair_log2fc":"3.99368872124414","exclude_pair_shrunk_log2fc":"2.88098780202363","exclude_pair_padj":"9.218117642603969e-11","five_traceable_log2fc":"3.94363437455393","five_traceable_shrunk_log2fc":"3.12906422855346","five_traceable_padj":"1.8859153598135103e-15","paper_counts_log2fc":"3.88659745126409","paper_counts_shrunk_log2fc":"3.25571821951266","paper_counts_padj":"1.8214457275025901e-19","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma04_g22350 | 1 | 1 | Lipid-ethylene metabolism | GO:0006633 | fatty acid biosynthetic process | 1 | Biological Process: fatty acid biosynthetic process (GO:0006633);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: transferase activity, transferring acyl groups other than amino-acyl groups (GO:0016747);;  | 3-ketoacyl-CoA synthase 1 | PREDICTED: 3-ketoacyl-CoA synthase 1-like [Musa acuminata subsp. malaccensis] | -6.39818578849146 | -0.068937810988285 | 0.457729805937014 | 4.535596673171 | 2.33802030787552 | 5.53841880866044e-08 | 3.99368872124414 | 2.88098780202363 | 9.218117642603969e-11 | 3.94363437455393 | 3.12906422855346 | 1.8859153598135103e-15 | 3.88659745126409 | 3.25571821951266 | 1.8214457275025901e-19 | True | True


record_id: DS057_R00102
dataset_id: DS057
record_json:
{"gene_id":"Ma04_g23850","robust_pathway_count":"1","robust_module_count":"1","modules":"Cell cycle and microtubules","pathways":"GO:0007017 | microtubule-based process","all_three_pathway_count":"1","GO_annotation":"Molecular Function: nucleotide binding (GO:0000166);; ","Swiss_Prot_annotation":"Kinesin-like protein KIN-14E","NR_annotation":"PREDICTED: kinesin-like protein KIFC3 isoform X1 [Musa acuminata subsp. malaccensis]","recovery_log2fc":"1.54839116509917","recovery_shrunk_log2fc":"0.531640179201918","recovery_padj":"0.323687536435321","reciprocal_log2fc":"-0.431543168085116","reciprocal_shrunk_log2fc":"-0.398745883523105","reciprocal_padj":"0.19575262646193","exclude_pair_log2fc":"-0.323615439332201","exclude_pair_shrunk_log2fc":"-0.293799304082635","exclude_pair_padj":"0.531899174256506","five_traceable_log2fc":"-0.263006187193662","five_traceable_shrunk_log2fc":"-0.248254888746148","five_traceable_padj":"0.417916514190559","paper_counts_log2fc":"-0.300825331277819","paper_counts_shrunk_log2fc":"-0.297518758336623","paper_counts_padj":"0.0085101037572385","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma04_g23850 | 1 | 1 | Cell cycle and microtubules | GO:0007017 | microtubule-based process | 1 | Molecular Function: nucleotide binding (GO:0000166);;  | Kinesin-like protein KIN-14E | PREDICTED: kinesin-like protein KIFC3 isoform X1 [Musa acuminata subsp. malaccensis] | 1.54839116509917 | 0.531640179201918 | 0.323687536435321 | -0.431543168085116 | -0.398745883523105 | 0.19575262646193 | -0.323615439332201 | -0.293799304082635 | 0.531899174256506 | -0.263006187193662 | -0.248254888746148 | 0.417916514190559 | -0.300825331277819 | -0.297518758336623 | 0.0085101037572385 | True | True


record_id: DS057_R00103
dataset_id: DS057
record_json:
{"gene_id":"Ma04_g24510","robust_pathway_count":"1","robust_module_count":"1","modules":"Lipid-ethylene metabolism","pathways":"GO:0006633 | fatty acid biosynthetic process","all_three_pathway_count":"1","GO_annotation":"Biological Process: fatty acid biosynthetic process (GO:0006633);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: transferase activity, transferring acyl groups other than amino-acyl groups (GO:0016747);; ","Swiss_Prot_annotation":"3-ketoacyl-CoA synthase 11","NR_annotation":"PREDICTED: 3-ketoacyl-CoA synthase 20-like [Musa acuminata subsp. malaccensis]","recovery_log2fc":"-4.83375915240004","recovery_shrunk_log2fc":"-0.532053739190375","recovery_padj":"0.0088253603237561","reciprocal_log2fc":"1.05647207611479","reciprocal_shrunk_log2fc":"0.992364535880481","reciprocal_padj":"1.08704024040451e-05","exclude_pair_log2fc":"0.921544126830925","exclude_pair_shrunk_log2fc":"0.855130441351951","exclude_pair_padj":"0.0032721173108032","five_traceable_log2fc":"0.90600903630159","five_traceable_shrunk_log2fc":"0.875838274362264","five_traceable_padj":"2.06117985432059e-06","paper_counts_log2fc":"0.852703395948563","paper_counts_shrunk_log2fc":"0.822953627621987","paper_counts_padj":"1.36740279953097e-05","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma04_g24510 | 1 | 1 | Lipid-ethylene metabolism | GO:0006633 | fatty acid biosynthetic process | 1 | Biological Process: fatty acid biosynthetic process (GO:0006633);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: transferase activity, transferring acyl groups other than amino-acyl groups (GO:0016747);;  | 3-ketoacyl-CoA synthase 11 | PREDICTED: 3-ketoacyl-CoA synthase 20-like [Musa acuminata subsp. malaccensis] | -4.83375915240004 | -0.532053739190375 | 0.0088253603237561 | 1.05647207611479 | 0.992364535880481 | 1.08704024040451e-05 | 0.921544126830925 | 0.855130441351951 | 0.0032721173108032 | 0.90600903630159 | 0.875838274362264 | 2.06117985432059e-06 | 0.852703395948563 | 0.822953627621987 | 1.36740279953097e-05 | True | True


record_id: DS057_R00104
dataset_id: DS057
record_json:
{"gene_id":"Ma04_g26240","robust_pathway_count":"1","robust_module_count":"1","modules":"RNA and ribosome biogenesis","pathways":"GO:0005730 | nucleolus","all_three_pathway_count":"1","GO_annotation":"Molecular Function: RNA binding (GO:0003723);; Molecular Function: ATP-dependent RNA helicase activity (GO:0004004);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: nucleolus (GO:0005730);; Cellular Component: plastid (GO:0009536);; Biological Process: RNA secondary structure unwinding (GO:0010501);; ","Swiss_Prot_annotation":"DEAD-box ATP-dependent RNA helicase 7","NR_annotation":"PREDICTED: DEAD-box ATP-dependent RNA helicase 7-like [Musa acuminata subsp. malaccensis]","recovery_log2fc":"0.261481030295603","recovery_shrunk_log2fc":"0.22709491737996","recovery_padj":"0.663151266261406","reciprocal_log2fc":"-0.413857981560515","reciprocal_shrunk_log2fc":"-0.391256223927297","reciprocal_padj":"0.127354526646015","exclude_pair_log2fc":"-0.589658105327733","exclude_pair_shrunk_log2fc":"-0.550439878001226","exclude_pair_padj":"0.0785817783477899","five_traceable_log2fc":"-0.553203812971474","five_traceable_shrunk_log2fc":"-0.536589507427619","five_traceable_padj":"0.0040704639420783","paper_counts_log2fc":"-0.563055783882432","paper_counts_shrunk_log2fc":"-0.554340322282082","paper_counts_padj":"1.33171343675557e-05","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma04_g26240 | 1 | 1 | RNA and ribosome biogenesis | GO:0005730 | nucleolus | 1 | Molecular Function: RNA binding (GO:0003723);; Molecular Function: ATP-dependent RNA helicase activity (GO:0004004);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: nucleolus (GO:0005730);; Cellular Component: plastid (GO:0009536);; Biological Process: RNA secondary structure unwinding (GO:0010501);;  | DEAD-box ATP-dependent RNA helicase 7 | PREDICTED: DEAD-box ATP-dependent RNA helicase 7-like [Musa acuminata subsp. malaccensis] | 0.261481030295603 | 0.22709491737996 | 0.663151266261406 | -0.413857981560515 | -0.391256223927297 | 0.127354526646015 | -0.589658105327733 | -0.550439878001226 | 0.0785817783477899 | -0.553203812971474 | -0.536589507427619 | 0.0040704639420783 | -0.563055783882432 | -0.554340322282082 | 1.33171343675557e-05 | True | True


record_id: DS057_R00105
dataset_id: DS057
record_json:
{"gene_id":"Ma04_g30060","robust_pathway_count":"1","robust_module_count":"1","modules":"RNA and ribosome biogenesis","pathways":"GO:0005730 | nucleolus","all_three_pathway_count":"1","GO_annotation":"Molecular Function: exonuclease activity (GO:0004527);; Cellular Component: nucleus (GO:0005634);; Biological Process: cellular response to DNA damage stimulus (GO:0006974);; Biological Process: cell cycle (GO:0007049);; Biological Process: replication fork protection (GO:0048478);; Biological Process: nucleic acid phosphodiester bond hydrolysis (GO:0090305);; ","Swiss_Prot_annotation":"--","NR_annotation":"PREDICTED: exosome complex component RRP42 [Musa acuminata subsp. malaccensis]","recovery_log2fc":"1.60960617201246","recovery_shrunk_log2fc":"0.689016016082119","recovery_padj":"0.165966788658949","reciprocal_log2fc":"-0.661858663124243","reciprocal_shrunk_log2fc":"-0.619760866614878","reciprocal_padj":"0.0139878184604666","exclude_pair_log2fc":"-0.761927272096386","exclude_pair_shrunk_log2fc":"-0.696451108429229","exclude_pair_padj":"0.0410696623977023","five_traceable_log2fc":"-0.796424284361231","five_traceable_shrunk_log2fc":"-0.762055317691398","five_traceable_padj":"0.0004363965068348","paper_counts_log2fc":"-0.857787658966311","paper_counts_shrunk_log2fc":"-0.835166901208288","paper_counts_padj":"3.03128791780803e-07","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma04_g30060 | 1 | 1 | RNA and ribosome biogenesis | GO:0005730 | nucleolus | 1 | Molecular Function: exonuclease activity (GO:0004527);; Cellular Component: nucleus (GO:0005634);; Biological Process: cellular response to DNA damage stimulus (GO:0006974);; Biological Process: cell cycle (GO:0007049);; Biological Process: replication fork protection (GO:0048478);; Biological Process: nucleic acid phosphodiester bond hydrolysis (GO:0090305);;  | -- | PREDICTED: exosome complex component RRP42 [Musa acuminata subsp. malaccensis] | 1.60960617201246 | 0.689016016082119 | 0.165966788658949 | -0.661858663124243 | -0.619760866614878 | 0.0139878184604666 | -0.761927272096386 | -0.696451108429229 | 0.0410696623977023 | -0.796424284361231 | -0.762055317691398 | 0.0004363965068348 | -0.857787658966311 | -0.835166901208288 | 3.03128791780803e-07 | True | True


record_id: DS057_R00106
dataset_id: DS057
record_json:
{"gene_id":"Ma04_g31500","robust_pathway_count":"1","robust_module_count":"1","modules":"RNA and ribosome biogenesis","pathways":"GO:0005730 | nucleolus","all_three_pathway_count":"1","GO_annotation":"--","Swiss_Prot_annotation":"--","NR_annotation":"PREDICTED: G patch domain-containing protein 4 [Musa acuminata subsp. malaccensis]","recovery_log2fc":"0.333470151972399","recovery_shrunk_log2fc":"0.253520983332165","recovery_padj":"0.719246197052347","reciprocal_log2fc":"-0.229990618423953","reciprocal_shrunk_log2fc":"-0.213039987097264","reciprocal_padj":"0.540819479328083","exclude_pair_log2fc":"-0.339817171809241","exclude_pair_shrunk_log2fc":"-0.301462972822027","exclude_pair_padj":"0.565094111720646","five_traceable_log2fc":"-0.322012715128642","five_traceable_shrunk_log2fc":"-0.300266014882108","five_traceable_padj":"0.359669965572977","paper_counts_log2fc":"-0.514032850985405","paper_counts_shrunk_log2fc":"-0.505154987613175","paper_counts_padj":"0.0002097736401529","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma04_g31500 | 1 | 1 | RNA and ribosome biogenesis | GO:0005730 | nucleolus | 1 | -- | -- | PREDICTED: G patch domain-containing protein 4 [Musa acuminata subsp. malaccensis] | 0.333470151972399 | 0.253520983332165 | 0.719246197052347 | -0.229990618423953 | -0.213039987097264 | 0.540819479328083 | -0.339817171809241 | -0.301462972822027 | 0.565094111720646 | -0.322012715128642 | -0.300266014882108 | 0.359669965572977 | -0.514032850985405 | -0.505154987613175 | 0.0002097736401529 | True | True


record_id: DS057_R00107
dataset_id: DS057
record_json:
{"gene_id":"Ma04_g31540","robust_pathway_count":"1","robust_module_count":"1","modules":"RNA and ribosome biogenesis","pathways":"GO:0005730 | nucleolus","all_three_pathway_count":"1","GO_annotation":"Molecular Function: GTPase activity (GO:0003924);; Molecular Function: GTP binding (GO:0005525);; Cellular Component: nucleolus (GO:0005730);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: maintenance of inflorescence meristem identity (GO:0010077);; Biological Process: ribosome biogenesis (GO:0042254);; Biological Process: regulation of epidermal cell differentiation (GO:0045604);; Biological Process: negative regulation of transcription, DNA-templated (GO:0045892);; Biological Process: regulation of embryonic development (GO:0045995);; Biological Process: floral organ morphogenesis (GO:0048444);; Biological Process: cotyledon development (GO:0048825);; Biological Process: regulation of leaf development (GO:2000024);; ","Swiss_Prot_annotation":"Guanine nucleotide-binding protein-like NSN1","NR_annotation":"PREDICTED: guanine nucleotide-binding protein-like NSN1 [Musa acuminata subsp. malaccensis]","recovery_log2fc":"0.386053416242876","recovery_shrunk_log2fc":"0.346587692905699","recovery_padj":"0.316903220736556","reciprocal_log2fc":"-0.5696668630596","reciprocal_shrunk_log2fc":"-0.517641523855141","reciprocal_padj":"0.107964375661221","exclude_pair_log2fc":"-0.805804287138262","exclude_pair_shrunk_log2fc":"-0.741616497094687","exclude_pair_padj":"0.020322244194312","five_traceable_log2fc":"-0.77858261290684","five_traceable_shrunk_log2fc":"-0.745128053527258","five_traceable_padj":"0.0005886927873742","paper_counts_log2fc":"-0.847551543621095","paper_counts_shrunk_log2fc":"-0.826249728738764","paper_counts_padj":"2.06698944118718e-07","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma04_g31540 | 1 | 1 | RNA and ribosome biogenesis | GO:0005730 | nucleolus | 1 | Molecular Function: GTPase activity (GO:0003924);; Molecular Function: GTP binding (GO:0005525);; Cellular Component: nucleolus (GO:0005730);; Cellular Component: plasmodesma (GO:0009506);; Biological Process: maintenance of inflorescence meristem identity (GO:0010077);; Biological Process: ribosome biogenesis (GO:0042254);; Biological Process: regulation of epidermal cell differentiation (GO:0045604);; Biological Process: negative regulation of transcription, DNA-templated (GO:0045892);; Biological Process: regulation of embryonic development (GO:0045995);; Biological Process: floral organ morphogenesis (GO:0048444);; Biological Process: cotyledon development (GO:0048825);; Biological Process: regulation of leaf development (GO:2000024);;  | Guanine nucleotide-binding protein-like NSN1 | PREDICTED: guanine nucleotide-binding protein-like NSN1 [Musa acuminata subsp. malaccensis] | 0.386053416242876 | 0.346587692905699 | 0.316903220736556 | -0.5696668630596 | -0.517641523855141 | 0.107964375661221 | -0.805804287138262 | -0.741616497094687 | 0.020322244194312 | -0.77858261290684 | -0.745128053527258 | 0.0005886927873742 | -0.847551543621095 | -0.826249728738764 | 2.06698944118718e-07 | True | True


record_id: DS057_R00108
dataset_id: DS057
record_json:
{"gene_id":"Ma04_g37200","robust_pathway_count":"1","robust_module_count":"1","modules":"Lipid-ethylene metabolism","pathways":"GO:0009873 | ethylene-activated signaling pathway","all_three_pathway_count":"1","GO_annotation":"--","Swiss_Prot_annotation":"EIN3-binding F-box protein 1","NR_annotation":"PREDICTED: EIN3-binding F-box protein 1-like [Musa acuminata subsp. malaccensis]","recovery_log2fc":"-1.0041180613401","recovery_shrunk_log2fc":"-0.722064864404796","recovery_padj":"0.0885902569925512","reciprocal_log2fc":"1.54278772656346","reciprocal_shrunk_log2fc":"1.47811156046288","reciprocal_padj":"4.54329653311283e-17","exclude_pair_log2fc":"1.66264092685611","exclude_pair_shrunk_log2fc":"1.54184863805568","exclude_pair_padj":"3.6284363916722e-09","five_traceable_log2fc":"1.63097369648127","five_traceable_shrunk_log2fc":"1.5739126091125","five_traceable_padj":"1.4490404362403199e-18","paper_counts_log2fc":"3.2562965374269","paper_counts_shrunk_log2fc":"3.19976332950896","paper_counts_padj":"2.73615640609214e-146","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma04_g37200 | 1 | 1 | Lipid-ethylene metabolism | GO:0009873 | ethylene-activated signaling pathway | 1 | -- | EIN3-binding F-box protein 1 | PREDICTED: EIN3-binding F-box protein 1-like [Musa acuminata subsp. malaccensis] | -1.0041180613401 | -0.722064864404796 | 0.0885902569925512 | 1.54278772656346 | 1.47811156046288 | 4.54329653311283e-17 | 1.66264092685611 | 1.54184863805568 | 3.6284363916722e-09 | 1.63097369648127 | 1.5739126091125 | 1.4490404362403199e-18 | 3.2562965374269 | 3.19976332950896 | 2.73615640609214e-146 | True | True


record_id: DS057_R00109
dataset_id: DS057
record_json:
{"gene_id":"Ma05_g03310","robust_pathway_count":"1","robust_module_count":"1","modules":"Lipid-ethylene metabolism","pathways":"GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","all_three_pathway_count":"1","GO_annotation":"Molecular Function: 3-beta-hydroxy-delta5-steroid dehydrogenase activity (GO:0003854);; Biological Process: steroid biosynthetic process (GO:0006694);; Biological Process: oxidation-reduction process (GO:0055114);; ","Swiss_Prot_annotation":"Cinnamoyl-CoA reductase-like SNL6","NR_annotation":"PREDICTED: cinnamoyl-CoA reductase-like SNL6 [Musa acuminata subsp. malaccensis]","recovery_log2fc":"-5.8187039189334","recovery_shrunk_log2fc":"-0.211261081405877","recovery_padj":"0.092071196303516","reciprocal_log2fc":"2.56972961436632","reciprocal_shrunk_log2fc":"2.19987628954428","reciprocal_padj":"1.8859851549409798e-12","exclude_pair_log2fc":"2.27070313952768","exclude_pair_shrunk_log2fc":"2.06069047496775","exclude_pair_padj":"5.36564770164048e-13","five_traceable_log2fc":"2.2737042252082","five_traceable_shrunk_log2fc":"2.15318995795099","five_traceable_padj":"2.3929055254679602e-23","paper_counts_log2fc":"1.99398802773909","paper_counts_shrunk_log2fc":"1.82835055351682","paper_counts_padj":"3.26971393343304e-11","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma05_g03310 | 1 | 1 | Lipid-ethylene metabolism | GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | 1 | Molecular Function: 3-beta-hydroxy-delta5-steroid dehydrogenase activity (GO:0003854);; Biological Process: steroid biosynthetic process (GO:0006694);; Biological Process: oxidation-reduction process (GO:0055114);;  | Cinnamoyl-CoA reductase-like SNL6 | PREDICTED: cinnamoyl-CoA reductase-like SNL6 [Musa acuminata subsp. malaccensis] | -5.8187039189334 | -0.211261081405877 | 0.092071196303516 | 2.56972961436632 | 2.19987628954428 | 1.8859851549409798e-12 | 2.27070313952768 | 2.06069047496775 | 5.36564770164048e-13 | 2.2737042252082 | 2.15318995795099 | 2.3929055254679602e-23 | 1.99398802773909 | 1.82835055351682 | 3.26971393343304e-11 | True | True


record_id: DS057_R00110
dataset_id: DS057
record_json:
{"gene_id":"Ma05_g04220","robust_pathway_count":"1","robust_module_count":"1","modules":"Lipid-ethylene metabolism","pathways":"GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","all_three_pathway_count":"1","GO_annotation":"Molecular Function: cinnamoyl-CoA reductase activity (GO:0016621);; Molecular Function: coenzyme binding (GO:0050662);; Biological Process: oxidation-reduction process (GO:0055114);; ","Swiss_Prot_annotation":"Cinnamoyl-CoA reductase 1","NR_annotation":"PREDICTED: cinnamoyl-CoA reductase 1 isoform X1 [Musa acuminata subsp. malaccensis]","recovery_log2fc":"-6.69162997588535","recovery_shrunk_log2fc":"-0.244798884865287","recovery_padj":"0.0366584596736198","reciprocal_log2fc":"0.765295137693328","reciprocal_shrunk_log2fc":"0.72239494469416","reciprocal_padj":"0.0015387315634353","exclude_pair_log2fc":"0.947118451402791","exclude_pair_shrunk_log2fc":"0.870968481359239","exclude_pair_padj":"0.0047270132753007","five_traceable_log2fc":"0.914451176374446","five_traceable_shrunk_log2fc":"0.880779160909523","five_traceable_padj":"5.98894040021833e-06","paper_counts_log2fc":"0.810330366775904","paper_counts_shrunk_log2fc":"0.790469867814396","paper_counts_padj":"5.26939043159508e-07","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma05_g04220 | 1 | 1 | Lipid-ethylene metabolism | GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | 1 | Molecular Function: cinnamoyl-CoA reductase activity (GO:0016621);; Molecular Function: coenzyme binding (GO:0050662);; Biological Process: oxidation-reduction process (GO:0055114);;  | Cinnamoyl-CoA reductase 1 | PREDICTED: cinnamoyl-CoA reductase 1 isoform X1 [Musa acuminata subsp. malaccensis] | -6.69162997588535 | -0.244798884865287 | 0.0366584596736198 | 0.765295137693328 | 0.72239494469416 | 0.0015387315634353 | 0.947118451402791 | 0.870968481359239 | 0.0047270132753007 | 0.914451176374446 | 0.880779160909523 | 5.98894040021833e-06 | 0.810330366775904 | 0.790469867814396 | 5.26939043159508e-07 | True | True


record_id: DS057_R00111
dataset_id: DS057
record_json:
{"gene_id":"Ma05_g14090","robust_pathway_count":"1","robust_module_count":"1","modules":"Cell cycle and microtubules","pathways":"GO:0008017 | microtubule binding","all_three_pathway_count":"1","GO_annotation":"--","Swiss_Prot_annotation":"--","NR_annotation":"PREDICTED: uncharacterized protein LOC103984916 isoform X2 [Musa acuminata subsp. malaccensis]","recovery_log2fc":"0.459432198623019","recovery_shrunk_log2fc":"0.382330220171681","recovery_padj":"0.404501117595566","reciprocal_log2fc":"-0.526739118010641","reciprocal_shrunk_log2fc":"-0.492209137802157","reciprocal_padj":"0.0681934879245288","exclude_pair_log2fc":"-0.486632059979937","exclude_pair_shrunk_log2fc":"-0.433785940738738","exclude_pair_padj":"0.342654339421886","five_traceable_log2fc":"-0.475462507697241","five_traceable_shrunk_log2fc":"-0.444287064256313","five_traceable_padj":"0.138284575811712","paper_counts_log2fc":"-0.48575141131511","paper_counts_shrunk_log2fc":"-0.465527814349891","paper_counts_padj":"0.0366636215990753","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma05_g14090 | 1 | 1 | Cell cycle and microtubules | GO:0008017 | microtubule binding | 1 | -- | -- | PREDICTED: uncharacterized protein LOC103984916 isoform X2 [Musa acuminata subsp. malaccensis] | 0.459432198623019 | 0.382330220171681 | 0.404501117595566 | -0.526739118010641 | -0.492209137802157 | 0.0681934879245288 | -0.486632059979937 | -0.433785940738738 | 0.342654339421886 | -0.475462507697241 | -0.444287064256313 | 0.138284575811712 | -0.48575141131511 | -0.465527814349891 | 0.0366636215990753 | True | True


record_id: DS057_R00112
dataset_id: DS057
record_json:
{"gene_id":"Ma05_g27430","robust_pathway_count":"1","robust_module_count":"1","modules":"Lipid-ethylene metabolism","pathways":"GO:0006633 | fatty acid biosynthetic process","all_three_pathway_count":"1","GO_annotation":"Biological Process: fatty acid biosynthetic process (GO:0006633);; Cellular Component: chloroplast (GO:0009507);; Molecular Function: acyl-[acyl-carrier-protein] desaturase activity (GO:0045300);; Molecular Function: metal ion binding (GO:0046872);; Biological Process: oxidation-reduction process (GO:0055114);; ","Swiss_Prot_annotation":"Stearoyl-[acyl-carrier-protein] 9-desaturase, chloroplastic","NR_annotation":"PREDICTED: stearoyl-[acyl-carrier-protein] 9-desaturase, chloroplastic-like [Musa acuminata subsp. malaccensis]","recovery_log2fc":"-2.58550512066118","recovery_shrunk_log2fc":"-0.755226778953876","recovery_padj":"0.0542300707640155","reciprocal_log2fc":"0.507941932125568","reciprocal_shrunk_log2fc":"0.477900141277538","reciprocal_padj":"0.061989295159674","exclude_pair_log2fc":"0.340083870715369","exclude_pair_shrunk_log2fc":"0.315524722238383","exclude_pair_padj":"0.426331076659841","five_traceable_log2fc":"0.359310638940153","five_traceable_shrunk_log2fc":"0.347991406890718","five_traceable_padj":"0.0929949181319496","paper_counts_log2fc":"0.253384460360242","paper_counts_shrunk_log2fc":"0.25019298413552","paper_counts_padj":"0.0453068754537576","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma05_g27430 | 1 | 1 | Lipid-ethylene metabolism | GO:0006633 | fatty acid biosynthetic process | 1 | Biological Process: fatty acid biosynthetic process (GO:0006633);; Cellular Component: chloroplast (GO:0009507);; Molecular Function: acyl-[acyl-carrier-protein] desaturase activity (GO:0045300);; Molecular Function: metal ion binding (GO:0046872);; Biological Process: oxidation-reduction process (GO:0055114);;  | Stearoyl-[acyl-carrier-protein] 9-desaturase, chloroplastic | PREDICTED: stearoyl-[acyl-carrier-protein] 9-desaturase, chloroplastic-like [Musa acuminata subsp. malaccensis] | -2.58550512066118 | -0.755226778953876 | 0.0542300707640155 | 0.507941932125568 | 0.477900141277538 | 0.061989295159674 | 0.340083870715369 | 0.315524722238383 | 0.426331076659841 | 0.359310638940153 | 0.347991406890718 | 0.0929949181319496 | 0.253384460360242 | 0.25019298413552 | 0.0453068754537576 | True | True


record_id: DS057_R00113
dataset_id: DS057
record_json:
{"gene_id":"Ma06_g02090","robust_pathway_count":"1","robust_module_count":"1","modules":"RNA and ribosome biogenesis","pathways":"GO:0006364 | rRNA processing","all_three_pathway_count":"1","GO_annotation":"Molecular Function: RNA binding (GO:0003723);; Molecular Function: helicase activity (GO:0004386);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: nucleolus (GO:0005730);; ","Swiss_Prot_annotation":"DEAD-box ATP-dependent RNA helicase 32","NR_annotation":"PREDICTED: DEAD-box ATP-dependent RNA helicase 32 isoform X1 [Musa acuminata subsp. malaccensis]","recovery_log2fc":"0.709159625836291","recovery_shrunk_log2fc":"0.444734183485691","recovery_padj":"0.477199318535759","reciprocal_log2fc":"-0.351413136185878","reciprocal_shrunk_log2fc":"-0.336347930865166","reciprocal_padj":"0.144860247388613","exclude_pair_log2fc":"-0.462060926863876","exclude_pair_shrunk_log2fc":"-0.42356313274809","exclude_pair_padj":"0.280370892598833","five_traceable_log2fc":"-0.423912076098801","five_traceable_shrunk_log2fc":"-0.407718938103118","five_traceable_padj":"0.0697221507919363","paper_counts_log2fc":"-0.373350991038957","paper_counts_shrunk_log2fc":"-0.365028225046521","paper_counts_padj":"0.0253563877938034","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma06_g02090 | 1 | 1 | RNA and ribosome biogenesis | GO:0006364 | rRNA processing | 1 | Molecular Function: RNA binding (GO:0003723);; Molecular Function: helicase activity (GO:0004386);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: nucleolus (GO:0005730);;  | DEAD-box ATP-dependent RNA helicase 32 | PREDICTED: DEAD-box ATP-dependent RNA helicase 32 isoform X1 [Musa acuminata subsp. malaccensis] | 0.709159625836291 | 0.444734183485691 | 0.477199318535759 | -0.351413136185878 | -0.336347930865166 | 0.144860247388613 | -0.462060926863876 | -0.42356313274809 | 0.280370892598833 | -0.423912076098801 | -0.407718938103118 | 0.0697221507919363 | -0.373350991038957 | -0.365028225046521 | 0.0253563877938034 | True | True


record_id: DS057_R00114
dataset_id: DS057
record_json:
{"gene_id":"Ma06_g04330","robust_pathway_count":"1","robust_module_count":"1","modules":"Lipid-ethylene metabolism","pathways":"GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","all_three_pathway_count":"1","GO_annotation":"Biological Process: carbohydrate metabolic process (GO:0005975);; Biological Process: malate metabolic process (GO:0006108);; Molecular Function: L-malate dehydrogenase activity (GO:0030060);; Biological Process: oxidation-reduction process (GO:0055114);; ","Swiss_Prot_annotation":"Malate dehydrogenase, chloroplastic","NR_annotation":"PREDICTED: malate dehydrogenase, chloroplastic-like [Musa acuminata subsp. malaccensis]","recovery_log2fc":"-0.716882438237528","recovery_shrunk_log2fc":"-0.58940878437815","recovery_padj":"0.109879696600048","reciprocal_log2fc":"2.29009221204139","reciprocal_shrunk_log2fc":"2.06306944562612","reciprocal_padj":"5.3214500547656804e-15","exclude_pair_log2fc":"2.3226088861526","exclude_pair_shrunk_log2fc":"2.04790000790832","exclude_pair_padj":"2.11481015252763e-10","five_traceable_log2fc":"2.43504608107802","five_traceable_shrunk_log2fc":"2.2194391204682","five_traceable_padj":"1.05711624544514e-15","paper_counts_log2fc":"2.35796389813632","paper_counts_shrunk_log2fc":"2.24662719262321","paper_counts_padj":"1.43530961878156e-27","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma06_g04330 | 1 | 1 | Lipid-ethylene metabolism | GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | 1 | Biological Process: carbohydrate metabolic process (GO:0005975);; Biological Process: malate metabolic process (GO:0006108);; Molecular Function: L-malate dehydrogenase activity (GO:0030060);; Biological Process: oxidation-reduction process (GO:0055114);;  | Malate dehydrogenase, chloroplastic | PREDICTED: malate dehydrogenase, chloroplastic-like [Musa acuminata subsp. malaccensis] | -0.716882438237528 | -0.58940878437815 | 0.109879696600048 | 2.29009221204139 | 2.06306944562612 | 5.3214500547656804e-15 | 2.3226088861526 | 2.04790000790832 | 2.11481015252763e-10 | 2.43504608107802 | 2.2194391204682 | 1.05711624544514e-15 | 2.35796389813632 | 2.24662719262321 | 1.43530961878156e-27 | True | True


record_id: DS057_R00115
dataset_id: DS057
record_json:
{"gene_id":"Ma06_g06270","robust_pathway_count":"1","robust_module_count":"1","modules":"Cell cycle and microtubules","pathways":"GO:0007017 | microtubule-based process","all_three_pathway_count":"1","GO_annotation":"Molecular Function: nucleotide binding (GO:0000166);; Cellular Component: cytoskeleton (GO:0005856);; ","Swiss_Prot_annotation":"Tubulin alpha chain","NR_annotation":"hypothetical protein B456_009G224800 [Gossypium raimondii]","recovery_log2fc":"0.385805690764046","recovery_shrunk_log2fc":"0.327871121842424","recovery_padj":"0.478353510830226","reciprocal_log2fc":"-0.689530548044082","reciprocal_shrunk_log2fc":"-0.563666134244866","reciprocal_padj":"0.212677039058797","exclude_pair_log2fc":"-0.730909149380573","exclude_pair_shrunk_log2fc":"-0.572836706811187","exclude_pair_padj":"0.343320261644584","five_traceable_log2fc":"-0.547661531505003","five_traceable_shrunk_log2fc":"-0.451118849443311","five_traceable_padj":"0.36705248063493","paper_counts_log2fc":"-0.493709157785757","paper_counts_shrunk_log2fc":"-0.379342984595035","paper_counts_padj":"0.484840230055476","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma06_g06270 | 1 | 1 | Cell cycle and microtubules | GO:0007017 | microtubule-based process | 1 | Molecular Function: nucleotide binding (GO:0000166);; Cellular Component: cytoskeleton (GO:0005856);;  | Tubulin alpha chain | hypothetical protein B456_009G224800 [Gossypium raimondii] | 0.385805690764046 | 0.327871121842424 | 0.478353510830226 | -0.689530548044082 | -0.563666134244866 | 0.212677039058797 | -0.730909149380573 | -0.572836706811187 | 0.343320261644584 | -0.547661531505003 | -0.451118849443311 | 0.36705248063493 | -0.493709157785757 | -0.379342984595035 | 0.484840230055476 | True | True


record_id: DS057_R00116
dataset_id: DS057
record_json:
{"gene_id":"Ma06_g13200","robust_pathway_count":"1","robust_module_count":"1","modules":"Lipid-ethylene metabolism","pathways":"GO:0006633 | fatty acid biosynthetic process","all_three_pathway_count":"1","GO_annotation":"Biological Process: fatty acid biosynthetic process (GO:0006633);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: transferase activity, transferring acyl groups other than amino-acyl groups (GO:0016747);; ","Swiss_Prot_annotation":"3-ketoacyl-CoA synthase 10","NR_annotation":"PREDICTED: 3-ketoacyl-CoA synthase 10-like [Musa acuminata subsp. malaccensis]","recovery_log2fc":"-5.05119305500574","recovery_shrunk_log2fc":"-0.460599532396184","recovery_padj":"0.0144622494045124","reciprocal_log2fc":"0.753835542089122","reciprocal_shrunk_log2fc":"0.631621819614253","reciprocal_padj":"0.129426466323583","exclude_pair_log2fc":"0.689538908692753","exclude_pair_shrunk_log2fc":"0.581140892145039","exclude_pair_padj":"0.253635031481896","five_traceable_log2fc":"0.542861094814512","five_traceable_shrunk_log2fc":"0.471177562385838","five_traceable_padj":"0.270861455300589","paper_counts_log2fc":"0.552216915799127","paper_counts_shrunk_log2fc":"0.525800521411542","paper_counts_padj":"0.0259885493813806","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma06_g13200 | 1 | 1 | Lipid-ethylene metabolism | GO:0006633 | fatty acid biosynthetic process | 1 | Biological Process: fatty acid biosynthetic process (GO:0006633);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: transferase activity, transferring acyl groups other than amino-acyl groups (GO:0016747);;  | 3-ketoacyl-CoA synthase 10 | PREDICTED: 3-ketoacyl-CoA synthase 10-like [Musa acuminata subsp. malaccensis] | -5.05119305500574 | -0.460599532396184 | 0.0144622494045124 | 0.753835542089122 | 0.631621819614253 | 0.129426466323583 | 0.689538908692753 | 0.581140892145039 | 0.253635031481896 | 0.542861094814512 | 0.471177562385838 | 0.270861455300589 | 0.552216915799127 | 0.525800521411542 | 0.0259885493813806 | True | True


record_id: DS057_R00117
dataset_id: DS057
record_json:
{"gene_id":"Ma06_g14450","robust_pathway_count":"1","robust_module_count":"1","modules":"Lipid-ethylene metabolism","pathways":"GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","all_three_pathway_count":"1","GO_annotation":"Molecular Function: magnesium ion binding (GO:0000287);; Molecular Function: isocitrate dehydrogenase (NAD+) activity (GO:0004449);; Cellular Component: mitochondrion (GO:0005739);; Biological Process: tricarboxylic acid cycle (GO:0006099);; Molecular Function: NAD binding (GO:0051287);; ","Swiss_Prot_annotation":"Isocitrate dehydrogenase [NAD] catalytic subunit 5, mitochondrial","NR_annotation":"PREDICTED: isocitrate dehydrogenase [NAD] catalytic subunit 5, mitochondrial [Musa acuminata subsp. malaccensis] ","recovery_log2fc":"-0.809033650557743","recovery_shrunk_log2fc":"-0.673635171354403","recovery_padj":"0.0420257109286811","reciprocal_log2fc":"0.617105295365638","reciprocal_shrunk_log2fc":"0.562971913861225","reciprocal_padj":"0.0679169924673511","exclude_pair_log2fc":"0.55092032286155","exclude_pair_shrunk_log2fc":"0.482709052026941","exclude_pair_padj":"0.309805377370526","five_traceable_log2fc":"0.639292046493619","five_traceable_shrunk_log2fc":"0.582332775126938","five_traceable_padj":"0.0827357161805751","paper_counts_log2fc":"0.588660419173882","paper_counts_shrunk_log2fc":"0.551124149779607","paper_counts_padj":"0.0439766822672273","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma06_g14450 | 1 | 1 | Lipid-ethylene metabolism | GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | 1 | Molecular Function: magnesium ion binding (GO:0000287);; Molecular Function: isocitrate dehydrogenase (NAD+) activity (GO:0004449);; Cellular Component: mitochondrion (GO:0005739);; Biological Process: tricarboxylic acid cycle (GO:0006099);; Molecular Function: NAD binding (GO:0051287);;  | Isocitrate dehydrogenase [NAD] catalytic subunit 5, mitochondrial | PREDICTED: isocitrate dehydrogenase [NAD] catalytic subunit 5, mitochondrial [Musa acuminata subsp. malaccensis]  | -0.809033650557743 | -0.673635171354403 | 0.0420257109286811 | 0.617105295365638 | 0.562971913861225 | 0.0679169924673511 | 0.55092032286155 | 0.482709052026941 | 0.309805377370526 | 0.639292046493619 | 0.582332775126938 | 0.0827357161805751 | 0.588660419173882 | 0.551124149779607 | 0.0439766822672273 | True | True


record_id: DS057_R00118
dataset_id: DS057
record_json:
{"gene_id":"Ma06_g16140","robust_pathway_count":"1","robust_module_count":"1","modules":"RNA and ribosome biogenesis","pathways":"GO:0042254 | ribosome biogenesis","all_three_pathway_count":"1","GO_annotation":"Molecular Function: structural constituent of ribosome (GO:0003735);; Cellular Component: ribosome (GO:0005840);; Biological Process: translation (GO:0006412);; ","Swiss_Prot_annotation":"60S ribosomal protein L34","NR_annotation":"PREDICTED: 60S ribosomal protein L34 [Musa acuminata subsp. malaccensis]","recovery_log2fc":"0.505880490546239","recovery_shrunk_log2fc":"0.386282596275288","recovery_padj":"0.483225241408415","reciprocal_log2fc":"-0.220478028822292","reciprocal_shrunk_log2fc":"-0.210805123640111","reciprocal_padj":"0.418383689481524","exclude_pair_log2fc":"-0.192204713947583","exclude_pair_shrunk_log2fc":"-0.179089653625796","exclude_pair_padj":"0.691869500341637","five_traceable_log2fc":"-0.289522917130855","five_traceable_shrunk_log2fc":"-0.27789313758166","five_traceable_padj":"0.263138904688089","paper_counts_log2fc":"-0.162064613778201","paper_counts_shrunk_log2fc":"-0.153300451044903","paper_counts_padj":"0.611762667370771","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma06_g16140 | 1 | 1 | RNA and ribosome biogenesis | GO:0042254 | ribosome biogenesis | 1 | Molecular Function: structural constituent of ribosome (GO:0003735);; Cellular Component: ribosome (GO:0005840);; Biological Process: translation (GO:0006412);;  | 60S ribosomal protein L34 | PREDICTED: 60S ribosomal protein L34 [Musa acuminata subsp. malaccensis] | 0.505880490546239 | 0.386282596275288 | 0.483225241408415 | -0.220478028822292 | -0.210805123640111 | 0.418383689481524 | -0.192204713947583 | -0.179089653625796 | 0.691869500341637 | -0.289522917130855 | -0.27789313758166 | 0.263138904688089 | -0.162064613778201 | -0.153300451044903 | 0.611762667370771 | True | True


record_id: DS057_R00119
dataset_id: DS057
record_json:
{"gene_id":"Ma06_g17470","robust_pathway_count":"1","robust_module_count":"1","modules":"Lipid-ethylene metabolism","pathways":"GO:0009873 | ethylene-activated signaling pathway","all_three_pathway_count":"1","GO_annotation":"Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; ","Swiss_Prot_annotation":"Protein ETHYLENE INSENSITIVE 3","NR_annotation":"PREDICTED: ETHYLENE INSENSITIVE 3-like 1 protein [Musa acuminata subsp. malaccensis]","recovery_log2fc":"-2.98253418407737","recovery_shrunk_log2fc":"-0.81847519676075","recovery_padj":"0.0341760124893466","reciprocal_log2fc":"0.950082337943075","reciprocal_shrunk_log2fc":"0.868393878192322","reciprocal_padj":"0.0018261909581709","exclude_pair_log2fc":"1.11148927360967","exclude_pair_shrunk_log2fc":"0.98693003989986","exclude_pair_padj":"0.0060864382420701","five_traceable_log2fc":"1.10305671655414","five_traceable_shrunk_log2fc":"1.02411845577379","five_traceable_padj":"0.0001613580192923","paper_counts_log2fc":"1.25952740201367","paper_counts_shrunk_log2fc":"1.20464704090958","paper_counts_padj":"4.6542313459264705e-09","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma06_g17470 | 1 | 1 | Lipid-ethylene metabolism | GO:0009873 | ethylene-activated signaling pathway | 1 | Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);;  | Protein ETHYLENE INSENSITIVE 3 | PREDICTED: ETHYLENE INSENSITIVE 3-like 1 protein [Musa acuminata subsp. malaccensis] | -2.98253418407737 | -0.81847519676075 | 0.0341760124893466 | 0.950082337943075 | 0.868393878192322 | 0.0018261909581709 | 1.11148927360967 | 0.98693003989986 | 0.0060864382420701 | 1.10305671655414 | 1.02411845577379 | 0.0001613580192923 | 1.25952740201367 | 1.20464704090958 | 4.6542313459264705e-09 | True | True


record_id: DS057_R00120
dataset_id: DS057
record_json:
{"gene_id":"Ma06_g22240","robust_pathway_count":"1","robust_module_count":"1","modules":"RNA and ribosome biogenesis","pathways":"GO:0001522 | pseudouridine synthesis","all_three_pathway_count":"1","GO_annotation":"Molecular Function: RNA binding (GO:0003723);; Cellular Component: mitochondrion (GO:0005739);; Molecular Function: pseudouridine synthase activity (GO:0009982);; Molecular Function: hydrolase activity, acting on glycosyl bonds (GO:0016798);; Molecular Function: deaminase activity (GO:0019239);; Biological Process: tRNA pseudouridine synthesis (GO:0031119);; ","Swiss_Prot_annotation":"RNA pseudouridine synthase 7","NR_annotation":"PREDICTED: RNA pseudouridine synthase 7 isoform X1 [Musa acuminata subsp. malaccensis] ","recovery_log2fc":"1.29969775019634","recovery_shrunk_log2fc":"0.394390573040418","recovery_padj":"0.515307541464048","reciprocal_log2fc":"-0.26262393976432","reciprocal_shrunk_log2fc":"-0.252325506459727","reciprocal_padj":"0.280543203945345","exclude_pair_log2fc":"-0.357865825177885","exclude_pair_shrunk_log2fc":"-0.328769371557203","exclude_pair_padj":"0.434830526077366","five_traceable_log2fc":"-0.328919233631804","five_traceable_shrunk_log2fc":"-0.317291894523783","five_traceable_padj":"0.158993585782693","paper_counts_log2fc":"-0.218932554912912","paper_counts_shrunk_log2fc":"-0.211579154932633","paper_counts_padj":"0.341246271198828","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma06_g22240 | 1 | 1 | RNA and ribosome biogenesis | GO:0001522 | pseudouridine synthesis | 1 | Molecular Function: RNA binding (GO:0003723);; Cellular Component: mitochondrion (GO:0005739);; Molecular Function: pseudouridine synthase activity (GO:0009982);; Molecular Function: hydrolase activity, acting on glycosyl bonds (GO:0016798);; Molecular Function: deaminase activity (GO:0019239);; Biological Process: tRNA pseudouridine synthesis (GO:0031119);;  | RNA pseudouridine synthase 7 | PREDICTED: RNA pseudouridine synthase 7 isoform X1 [Musa acuminata subsp. malaccensis]  | 1.29969775019634 | 0.394390573040418 | 0.515307541464048 | -0.26262393976432 | -0.252325506459727 | 0.280543203945345 | -0.357865825177885 | -0.328769371557203 | 0.434830526077366 | -0.328919233631804 | -0.317291894523783 | 0.158993585782693 | -0.218932554912912 | -0.211579154932633 | 0.341246271198828 | True | True


record_id: DS057_R00121
dataset_id: DS057
record_json:
{"gene_id":"Ma06_g25850","robust_pathway_count":"1","robust_module_count":"1","modules":"Lipid-ethylene metabolism","pathways":"GO:0006633 | fatty acid biosynthetic process","all_three_pathway_count":"1","GO_annotation":"Biological Process: fatty acid biosynthetic process (GO:0006633);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: transferase activity, transferring acyl groups other than amino-acyl groups (GO:0016747);; ","Swiss_Prot_annotation":"3-ketoacyl-CoA synthase 11","NR_annotation":"PREDICTED: 3-ketoacyl-CoA synthase 11-like [Musa acuminata subsp. malaccensis]","recovery_log2fc":"-5.20802742989499","recovery_shrunk_log2fc":"-0.180985258619821","recovery_padj":"0.200841589945677","reciprocal_log2fc":"2.76841390701212","reciprocal_shrunk_log2fc":"2.39715738686669","reciprocal_padj":"1.2659532992904502e-15","exclude_pair_log2fc":"2.82930427450252","exclude_pair_shrunk_log2fc":"2.38682276953631","exclude_pair_padj":"3.3134024971527096e-11","five_traceable_log2fc":"2.6734975552827","five_traceable_shrunk_log2fc":"2.3218557316807","five_traceable_padj":"2.16957658788086e-12","paper_counts_log2fc":"2.64987335831874","paper_counts_shrunk_log2fc":"2.49022843639608","paper_counts_padj":"6.19649876376642e-27","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma06_g25850 | 1 | 1 | Lipid-ethylene metabolism | GO:0006633 | fatty acid biosynthetic process | 1 | Biological Process: fatty acid biosynthetic process (GO:0006633);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: transferase activity, transferring acyl groups other than amino-acyl groups (GO:0016747);;  | 3-ketoacyl-CoA synthase 11 | PREDICTED: 3-ketoacyl-CoA synthase 11-like [Musa acuminata subsp. malaccensis] | -5.20802742989499 | -0.180985258619821 | 0.200841589945677 | 2.76841390701212 | 2.39715738686669 | 1.2659532992904502e-15 | 2.82930427450252 | 2.38682276953631 | 3.3134024971527096e-11 | 2.6734975552827 | 2.3218557316807 | 2.16957658788086e-12 | 2.64987335831874 | 2.49022843639608 | 6.19649876376642e-27 | True | True


record_id: DS057_R00122
dataset_id: DS057
record_json:
{"gene_id":"Ma06_g33860","robust_pathway_count":"1","robust_module_count":"1","modules":"Lipid-ethylene metabolism","pathways":"GO:0009873 | ethylene-activated signaling pathway","all_three_pathway_count":"1","GO_annotation":"Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; ","Swiss_Prot_annotation":"Protein ETHYLENE INSENSITIVE 3","NR_annotation":"PREDICTED: ETHYLENE INSENSITIVE 3-like 1 protein [Musa acuminata subsp. malaccensis] ","recovery_log2fc":"-1.43001701688105","recovery_shrunk_log2fc":"-0.444509229311268","recovery_padj":"0.444214747615289","reciprocal_log2fc":"0.781886314166954","reciprocal_shrunk_log2fc":"0.749008317377398","reciprocal_padj":"0.0001076170691102","exclude_pair_log2fc":"0.820166238752042","exclude_pair_shrunk_log2fc":"0.753764583804768","exclude_pair_padj":"0.018924411878528","five_traceable_log2fc":"0.789810125455767","five_traceable_shrunk_log2fc":"0.75515638799202","five_traceable_padj":"0.000543406426846","paper_counts_log2fc":"0.884130384624946","paper_counts_shrunk_log2fc":"0.872889098857027","paper_counts_padj":"3.37497678419974e-15","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma06_g33860 | 1 | 1 | Lipid-ethylene metabolism | GO:0009873 | ethylene-activated signaling pathway | 1 | Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);;  | Protein ETHYLENE INSENSITIVE 3 | PREDICTED: ETHYLENE INSENSITIVE 3-like 1 protein [Musa acuminata subsp. malaccensis]  | -1.43001701688105 | -0.444509229311268 | 0.444214747615289 | 0.781886314166954 | 0.749008317377398 | 0.0001076170691102 | 0.820166238752042 | 0.753764583804768 | 0.018924411878528 | 0.789810125455767 | 0.75515638799202 | 0.000543406426846 | 0.884130384624946 | 0.872889098857027 | 3.37497678419974e-15 | True | True


record_id: DS057_R00123
dataset_id: DS057
record_json:
{"gene_id":"Ma07_g05520","robust_pathway_count":"1","robust_module_count":"1","modules":"Cell cycle and microtubules","pathways":"GO:0000082 | G1/S transition of mitotic cell cycle","all_three_pathway_count":"1","GO_annotation":"--","Swiss_Prot_annotation":"Cyclin-D3-3","NR_annotation":"PREDICTED: cyclin-D3-2-like [Musa acuminata subsp. malaccensis]","recovery_log2fc":"0.841298648489869","recovery_shrunk_log2fc":"0.145480358402809","recovery_padj":"0.844210349160968","reciprocal_log2fc":"-0.60215618279456","reciprocal_shrunk_log2fc":"-0.532767489067016","reciprocal_padj":"0.142661603039417","exclude_pair_log2fc":"-0.670001214598628","exclude_pair_shrunk_log2fc":"-0.589814410943062","exclude_pair_padj":"0.174692475753491","five_traceable_log2fc":"-0.781642329865507","five_traceable_shrunk_log2fc":"-0.712553447873916","five_traceable_padj":"0.0275671085117194","paper_counts_log2fc":"-0.881629051555487","paper_counts_shrunk_log2fc":"-0.856237520075926","paper_counts_padj":"5.08312934916173e-07","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma07_g05520 | 1 | 1 | Cell cycle and microtubules | GO:0000082 | G1/S transition of mitotic cell cycle | 1 | -- | Cyclin-D3-3 | PREDICTED: cyclin-D3-2-like [Musa acuminata subsp. malaccensis] | 0.841298648489869 | 0.145480358402809 | 0.844210349160968 | -0.60215618279456 | -0.532767489067016 | 0.142661603039417 | -0.670001214598628 | -0.589814410943062 | 0.174692475753491 | -0.781642329865507 | -0.712553447873916 | 0.0275671085117194 | -0.881629051555487 | -0.856237520075926 | 5.08312934916173e-07 | True | True


record_id: DS057_R00124
dataset_id: DS057
record_json:
{"gene_id":"Ma07_g07450","robust_pathway_count":"1","robust_module_count":"1","modules":"Lipid-ethylene metabolism","pathways":"GO:0006631 | fatty acid metabolic process","all_three_pathway_count":"1","GO_annotation":"Molecular Function: acyl-CoA dehydrogenase activity (GO:0003995);; Molecular Function: acyl-CoA oxidase activity (GO:0003997);; Cellular Component: peroxisome (GO:0005777);; Biological Process: fatty acid beta-oxidation (GO:0006635);; Molecular Function: flavin adenine dinucleotide binding (GO:0050660);; ","Swiss_Prot_annotation":"Peroxisomal acyl-coenzyme A oxidase 1","NR_annotation":"PREDICTED: peroxisomal acyl-coenzyme A oxidase 1-like [Musa acuminata subsp. malaccensis]","recovery_log2fc":"-2.01910276782598","recovery_shrunk_log2fc":"-1.18634749619933","recovery_padj":"0.002197025389066","reciprocal_log2fc":"0.4443636660908","reciprocal_shrunk_log2fc":"0.419452856584622","reciprocal_padj":"0.101697834395325","exclude_pair_log2fc":"0.514330540828417","exclude_pair_shrunk_log2fc":"0.474599837279443","exclude_pair_padj":"0.187398867730014","five_traceable_log2fc":"0.570487259096819","five_traceable_shrunk_log2fc":"0.54598735889979","five_traceable_padj":"0.0163324379359253","paper_counts_log2fc":"0.587189555365254","paper_counts_shrunk_log2fc":"0.577708206197435","paper_counts_padj":"8.39119757498169e-06","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma07_g07450 | 1 | 1 | Lipid-ethylene metabolism | GO:0006631 | fatty acid metabolic process | 1 | Molecular Function: acyl-CoA dehydrogenase activity (GO:0003995);; Molecular Function: acyl-CoA oxidase activity (GO:0003997);; Cellular Component: peroxisome (GO:0005777);; Biological Process: fatty acid beta-oxidation (GO:0006635);; Molecular Function: flavin adenine dinucleotide binding (GO:0050660);;  | Peroxisomal acyl-coenzyme A oxidase 1 | PREDICTED: peroxisomal acyl-coenzyme A oxidase 1-like [Musa acuminata subsp. malaccensis] | -2.01910276782598 | -1.18634749619933 | 0.002197025389066 | 0.4443636660908 | 0.419452856584622 | 0.101697834395325 | 0.514330540828417 | 0.474599837279443 | 0.187398867730014 | 0.570487259096819 | 0.54598735889979 | 0.0163324379359253 | 0.587189555365254 | 0.577708206197435 | 8.39119757498169e-06 | True | True


record_id: DS057_R00125
dataset_id: DS057
record_json:
{"gene_id":"Ma07_g14810","robust_pathway_count":"1","robust_module_count":"1","modules":"RNA and ribosome biogenesis","pathways":"GO:0008033 | tRNA processing","all_three_pathway_count":"1","GO_annotation":"Biological Process: tRNA nucleoside ribose methylation (GO:0002128);; Biological Process: cytoplasmic translation (GO:0002181);; Cellular Component: cytoplasm (GO:0005737);; Molecular Function: tRNA methyltransferase activity (GO:0008175);; ","Swiss_Prot_annotation":"--","NR_annotation":"PREDICTED: putative tRNA (cytidine(32)/guanosine(34)-2&apos;-O)-methyltransferase [Musa acuminata subsp. malaccensis]","recovery_log2fc":"0.322231543310704","recovery_shrunk_log2fc":"0.244520113499281","recovery_padj":"0.734053859156403","reciprocal_log2fc":"-0.198705065612931","reciprocal_shrunk_log2fc":"-0.189734843228987","reciprocal_padj":"0.48440553254717","exclude_pair_log2fc":"-0.234682631329172","exclude_pair_shrunk_log2fc":"-0.215619577695978","exclude_pair_padj":"0.652798924542974","five_traceable_log2fc":"-0.282433319179865","five_traceable_shrunk_log2fc":"-0.271745490667499","five_traceable_padj":"0.259954177315048","paper_counts_log2fc":"-0.0513673370703999","paper_counts_shrunk_log2fc":"-0.0482723335276131","paper_counts_padj":"0.892935111083731","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma07_g14810 | 1 | 1 | RNA and ribosome biogenesis | GO:0008033 | tRNA processing | 1 | Biological Process: tRNA nucleoside ribose methylation (GO:0002128);; Biological Process: cytoplasmic translation (GO:0002181);; Cellular Component: cytoplasm (GO:0005737);; Molecular Function: tRNA methyltransferase activity (GO:0008175);;  | -- | PREDICTED: putative tRNA (cytidine(32)/guanosine(34)-2&apos;-O)-methyltransferase [Musa acuminata subsp. malaccensis] | 0.322231543310704 | 0.244520113499281 | 0.734053859156403 | -0.198705065612931 | -0.189734843228987 | 0.48440553254717 | -0.234682631329172 | -0.215619577695978 | 0.652798924542974 | -0.282433319179865 | -0.271745490667499 | 0.259954177315048 | -0.0513673370703999 | -0.0482723335276131 | 0.892935111083731 | True | True


record_id: DS057_R00126
dataset_id: DS057
record_json:
{"gene_id":"Ma07_g15640","robust_pathway_count":"1","robust_module_count":"1","modules":"RNA and ribosome biogenesis","pathways":"GO:0005730 | nucleolus","all_three_pathway_count":"1","GO_annotation":"--","Swiss_Prot_annotation":"--","NR_annotation":"PREDICTED: uncharacterized protein LOC103991759 [Musa acuminata subsp. malaccensis] ","recovery_log2fc":"0.770584524558477","recovery_shrunk_log2fc":"0.591644855636297","recovery_padj":"0.166029796635029","reciprocal_log2fc":"-0.388026297349218","reciprocal_shrunk_log2fc":"-0.359493220511644","reciprocal_padj":"0.246640589455191","exclude_pair_log2fc":"-0.408995534392472","exclude_pair_shrunk_log2fc":"-0.358533641791739","exclude_pair_padj":"0.492194256304053","five_traceable_log2fc":"-0.373541869454704","five_traceable_shrunk_log2fc":"-0.345099606100633","five_traceable_padj":"0.311294820336045","paper_counts_log2fc":"-0.779493153102112","paper_counts_shrunk_log2fc":"-0.714983573704281","paper_counts_padj":"0.0182143808162464","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma07_g15640 | 1 | 1 | RNA and ribosome biogenesis | GO:0005730 | nucleolus | 1 | -- | -- | PREDICTED: uncharacterized protein LOC103991759 [Musa acuminata subsp. malaccensis]  | 0.770584524558477 | 0.591644855636297 | 0.166029796635029 | -0.388026297349218 | -0.359493220511644 | 0.246640589455191 | -0.408995534392472 | -0.358533641791739 | 0.492194256304053 | -0.373541869454704 | -0.345099606100633 | 0.311294820336045 | -0.779493153102112 | -0.714983573704281 | 0.0182143808162464 | True | True


record_id: DS057_R00127
dataset_id: DS057
record_json:
{"gene_id":"Ma07_g17160","robust_pathway_count":"1","robust_module_count":"1","modules":"RNA and ribosome biogenesis","pathways":"GO:0008033 | tRNA processing","all_three_pathway_count":"1","GO_annotation":"Molecular Function: GTPase activity (GO:0003924);; Molecular Function: GTP binding (GO:0005525);; Cellular Component: mitochondrion (GO:0005739);; Biological Process: tRNA modification (GO:0006400);; ","Swiss_Prot_annotation":"Probable tRNA modification GTPase MnmE","NR_annotation":"PREDICTED: uncharacterized protein LOC103992101 [Musa acuminata subsp. malaccensis]","recovery_log2fc":"2.63387382301451","recovery_shrunk_log2fc":"0.148678403230951","recovery_padj":"","reciprocal_log2fc":"-0.330477936078222","reciprocal_shrunk_log2fc":"-0.312375254905946","reciprocal_padj":"0.248780739627332","exclude_pair_log2fc":"-0.37334724974262","exclude_pair_shrunk_log2fc":"-0.329816159406509","exclude_pair_padj":"0.525758381452429","five_traceable_log2fc":"-0.382493917220345","five_traceable_shrunk_log2fc":"-0.361497932328838","five_traceable_padj":"0.199888331968572","paper_counts_log2fc":"-0.410672087108551","paper_counts_shrunk_log2fc":"-0.398787440605517","paper_counts_padj":"0.032487821898627","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma07_g17160 | 1 | 1 | RNA and ribosome biogenesis | GO:0008033 | tRNA processing | 1 | Molecular Function: GTPase activity (GO:0003924);; Molecular Function: GTP binding (GO:0005525);; Cellular Component: mitochondrion (GO:0005739);; Biological Process: tRNA modification (GO:0006400);;  | Probable tRNA modification GTPase MnmE | PREDICTED: uncharacterized protein LOC103992101 [Musa acuminata subsp. malaccensis] | 2.63387382301451 | 0.148678403230951 | -0.330477936078222 | -0.312375254905946 | 0.248780739627332 | -0.37334724974262 | -0.329816159406509 | 0.525758381452429 | -0.382493917220345 | -0.361497932328838 | 0.199888331968572 | -0.410672087108551 | -0.398787440605517 | 0.032487821898627 | True | True


record_id: DS057_R00128
dataset_id: DS057
record_json:
{"gene_id":"Ma07_g17420","robust_pathway_count":"1","robust_module_count":"1","modules":"RNA and ribosome biogenesis","pathways":"GO:0042254 | ribosome biogenesis","all_three_pathway_count":"1","GO_annotation":"Molecular Function: ion binding (GO:0043167);; ","Swiss_Prot_annotation":"Probable GTP-binding protein OBGM, mitochondrial","NR_annotation":"PREDICTED: probable GTP-binding protein OBGM, mitochondrial [Musa acuminata subsp. malaccensis]","recovery_log2fc":"1.66114249140459","recovery_shrunk_log2fc":"0.141389399519665","recovery_padj":"","reciprocal_log2fc":"-0.223289803732463","reciprocal_shrunk_log2fc":"-0.214345207881129","reciprocal_padj":"0.382651335571293","exclude_pair_log2fc":"-0.275247957827089","exclude_pair_shrunk_log2fc":"-0.250553645230279","exclude_pair_padj":"0.606251066064063","five_traceable_log2fc":"-0.262557713694014","five_traceable_shrunk_log2fc":"-0.251870197029486","five_traceable_padj":"0.323000931356057","paper_counts_log2fc":"-0.287015605876539","paper_counts_shrunk_log2fc":"-0.281771309732999","paper_counts_padj":"0.0629286915328347","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma07_g17420 | 1 | 1 | RNA and ribosome biogenesis | GO:0042254 | ribosome biogenesis | 1 | Molecular Function: ion binding (GO:0043167);;  | Probable GTP-binding protein OBGM, mitochondrial | PREDICTED: probable GTP-binding protein OBGM, mitochondrial [Musa acuminata subsp. malaccensis] | 1.66114249140459 | 0.141389399519665 | -0.223289803732463 | -0.214345207881129 | 0.382651335571293 | -0.275247957827089 | -0.250553645230279 | 0.606251066064063 | -0.262557713694014 | -0.251870197029486 | 0.323000931356057 | -0.287015605876539 | -0.281771309732999 | 0.0629286915328347 | True | True


record_id: DS057_R00129
dataset_id: DS057
record_json:
{"gene_id":"Ma07_g28570","robust_pathway_count":"1","robust_module_count":"1","modules":"RNA and ribosome biogenesis","pathways":"GO:0005730 | nucleolus","all_three_pathway_count":"1","GO_annotation":"Molecular Function: nucleic acid binding (GO:0003676);; Molecular Function: ATP-dependent RNA helicase activity (GO:0004004);; Molecular Function: ATP binding (GO:0005524);; Biological Process: RNA secondary structure unwinding (GO:0010501);; ","Swiss_Prot_annotation":"DEAD-box ATP-dependent RNA helicase 16","NR_annotation":"PREDICTED: DEAD-box ATP-dependent RNA helicase 16 [Musa acuminata subsp. malaccensis]","recovery_log2fc":"0.371230342813803","recovery_shrunk_log2fc":"0.291964697020517","recovery_padj":"0.632343136387853","reciprocal_log2fc":"-0.343916571950341","reciprocal_shrunk_log2fc":"-0.330457219157213","reciprocal_padj":"0.132145963588041","exclude_pair_log2fc":"-0.449358284423375","exclude_pair_shrunk_log2fc":"-0.414411677682979","exclude_pair_padj":"0.273704694027707","five_traceable_log2fc":"-0.405797861888889","five_traceable_shrunk_log2fc":"-0.391087498373925","five_traceable_padj":"0.075282620477994","paper_counts_log2fc":"-0.484911621419568","paper_counts_shrunk_log2fc":"-0.478554184323666","paper_counts_padj":"5.03407325711333e-05","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma07_g28570 | 1 | 1 | RNA and ribosome biogenesis | GO:0005730 | nucleolus | 1 | Molecular Function: nucleic acid binding (GO:0003676);; Molecular Function: ATP-dependent RNA helicase activity (GO:0004004);; Molecular Function: ATP binding (GO:0005524);; Biological Process: RNA secondary structure unwinding (GO:0010501);;  | DEAD-box ATP-dependent RNA helicase 16 | PREDICTED: DEAD-box ATP-dependent RNA helicase 16 [Musa acuminata subsp. malaccensis] | 0.371230342813803 | 0.291964697020517 | 0.632343136387853 | -0.343916571950341 | -0.330457219157213 | 0.132145963588041 | -0.449358284423375 | -0.414411677682979 | 0.273704694027707 | -0.405797861888889 | -0.391087498373925 | 0.075282620477994 | -0.484911621419568 | -0.478554184323666 | 5.03407325711333e-05 | True | True


record_id: DS057_R00130
dataset_id: DS057
record_json:
{"gene_id":"Ma07_g28810","robust_pathway_count":"1","robust_module_count":"1","modules":"RNA and ribosome biogenesis","pathways":"GO:0005730 | nucleolus","all_three_pathway_count":"1","GO_annotation":"Molecular Function: RNA binding (GO:0003723);; Cellular Component: nucleolus (GO:0005730);; Biological Process: ribosomal small subunit biogenesis (GO:0042274);; ","Swiss_Prot_annotation":"--","NR_annotation":"PREDICTED: nucleolar MIF4G domain-containing protein 1 [Musa acuminata subsp. malaccensis]","recovery_log2fc":"0.817286914594616","recovery_shrunk_log2fc":"0.534958857101819","recovery_padj":"0.330588099737089","reciprocal_log2fc":"-0.49589059841987","reciprocal_shrunk_log2fc":"-0.456811725463127","reciprocal_padj":"0.134543867183015","exclude_pair_log2fc":"-0.700484468091936","exclude_pair_shrunk_log2fc":"-0.635480704383837","exclude_pair_padj":"0.0819142409497562","five_traceable_log2fc":"-0.657921786022208","five_traceable_shrunk_log2fc":"-0.624492332518226","five_traceable_padj":"0.0106195836335891","paper_counts_log2fc":"-0.707533857552507","paper_counts_shrunk_log2fc":"-0.693047512357647","paper_counts_padj":"1.71159515188965e-06","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma07_g28810 | 1 | 1 | RNA and ribosome biogenesis | GO:0005730 | nucleolus | 1 | Molecular Function: RNA binding (GO:0003723);; Cellular Component: nucleolus (GO:0005730);; Biological Process: ribosomal small subunit biogenesis (GO:0042274);;  | -- | PREDICTED: nucleolar MIF4G domain-containing protein 1 [Musa acuminata subsp. malaccensis] | 0.817286914594616 | 0.534958857101819 | 0.330588099737089 | -0.49589059841987 | -0.456811725463127 | 0.134543867183015 | -0.700484468091936 | -0.635480704383837 | 0.0819142409497562 | -0.657921786022208 | -0.624492332518226 | 0.0106195836335891 | -0.707533857552507 | -0.693047512357647 | 1.71159515188965e-06 | True | True


record_id: DS057_R00131
dataset_id: DS057
record_json:
{"gene_id":"Ma08_g01340","robust_pathway_count":"1","robust_module_count":"1","modules":"RNA and ribosome biogenesis","pathways":"GO:0005730 | nucleolus","all_three_pathway_count":"1","GO_annotation":"--","Swiss_Prot_annotation":"Histone deacetylase HDT1","NR_annotation":"PREDICTED: histone deacetylase HDT1-like isoform X1 [Musa acuminata subsp. malaccensis]","recovery_log2fc":"0.380293719888455","recovery_shrunk_log2fc":"0.275539193914634","recovery_padj":"0.702807706433061","reciprocal_log2fc":"-0.532445367252923","reciprocal_shrunk_log2fc":"-0.510803184661177","reciprocal_padj":"0.0120509530258455","exclude_pair_log2fc":"-0.540130716880737","exclude_pair_shrunk_log2fc":"-0.495585050771036","exclude_pair_padj":"0.179719897713834","five_traceable_log2fc":"-0.557681453525566","five_traceable_shrunk_log2fc":"-0.534080016581239","five_traceable_padj":"0.0185976958190187","paper_counts_log2fc":"-0.477037285193846","paper_counts_shrunk_log2fc":"-0.452949645282552","paper_counts_padj":"0.0680208052526579","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma08_g01340 | 1 | 1 | RNA and ribosome biogenesis | GO:0005730 | nucleolus | 1 | -- | Histone deacetylase HDT1 | PREDICTED: histone deacetylase HDT1-like isoform X1 [Musa acuminata subsp. malaccensis] | 0.380293719888455 | 0.275539193914634 | 0.702807706433061 | -0.532445367252923 | -0.510803184661177 | 0.0120509530258455 | -0.540130716880737 | -0.495585050771036 | 0.179719897713834 | -0.557681453525566 | -0.534080016581239 | 0.0185976958190187 | -0.477037285193846 | -0.452949645282552 | 0.0680208052526579 | True | True


record_id: DS057_R00132
dataset_id: DS057
record_json:
{"gene_id":"Ma08_g02040","robust_pathway_count":"1","robust_module_count":"1","modules":"RNA and ribosome biogenesis","pathways":"GO:0006364 | rRNA processing","all_three_pathway_count":"1","GO_annotation":"--","Swiss_Prot_annotation":"E3 ubiquitin-protein ligase COP1","NR_annotation":"PREDICTED: uncharacterized WD repeat-containing protein C17D11.16 [Musa acuminata subsp. malaccensis] ","recovery_log2fc":"0.487129187618288","recovery_shrunk_log2fc":"0.232611091550961","recovery_padj":"0.799056608547947","reciprocal_log2fc":"-0.285568754263497","reciprocal_shrunk_log2fc":"-0.266264684521937","reciprocal_padj":"0.400450574407001","exclude_pair_log2fc":"-0.447088707949205","exclude_pair_shrunk_log2fc":"-0.402462578989861","exclude_pair_padj":"0.365988937809619","five_traceable_log2fc":"-0.380338499012972","five_traceable_shrunk_log2fc":"-0.357341399862801","five_traceable_padj":"0.23098392770065","paper_counts_log2fc":"-0.299262498243621","paper_counts_shrunk_log2fc":"-0.289617360838685","paper_counts_padj":"0.161334544225164","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma08_g02040 | 1 | 1 | RNA and ribosome biogenesis | GO:0006364 | rRNA processing | 1 | -- | E3 ubiquitin-protein ligase COP1 | PREDICTED: uncharacterized WD repeat-containing protein C17D11.16 [Musa acuminata subsp. malaccensis]  | 0.487129187618288 | 0.232611091550961 | 0.799056608547947 | -0.285568754263497 | -0.266264684521937 | 0.400450574407001 | -0.447088707949205 | -0.402462578989861 | 0.365988937809619 | -0.380338499012972 | -0.357341399862801 | 0.23098392770065 | -0.299262498243621 | -0.289617360838685 | 0.161334544225164 | True | True


record_id: DS057_R00133
dataset_id: DS057
record_json:
{"gene_id":"Ma08_g04050","robust_pathway_count":"1","robust_module_count":"1","modules":"Lipid-ethylene metabolism","pathways":"GO:0006633 | fatty acid biosynthetic process","all_three_pathway_count":"1","GO_annotation":"Biological Process: fatty acid biosynthetic process (GO:0006633);; Cellular Component: plastid (GO:0009536);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: transferase activity, transferring acyl groups other than amino-acyl groups (GO:0016747);; ","Swiss_Prot_annotation":"3-ketoacyl-CoA synthase 17","NR_annotation":"PREDICTED: 3-ketoacyl-CoA synthase 17-like [Musa acuminata subsp. malaccensis]","recovery_log2fc":"-6.68080644846177","recovery_shrunk_log2fc":"-0.676840276697401","recovery_padj":"0.0026660174210626","reciprocal_log2fc":"0.860746783865706","reciprocal_shrunk_log2fc":"0.772855688700171","reciprocal_padj":"0.0134213167882446","exclude_pair_log2fc":"0.638123698572018","exclude_pair_shrunk_log2fc":"0.58989787244083","exclude_pair_padj":"0.0744752898512627","five_traceable_log2fc":"0.620737816555796","five_traceable_shrunk_log2fc":"0.601133042022685","five_traceable_padj":"0.0014309144902785","paper_counts_log2fc":"0.579887831748127","paper_counts_shrunk_log2fc":"0.566361478770189","paper_counts_padj":"0.0003507503274869","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma08_g04050 | 1 | 1 | Lipid-ethylene metabolism | GO:0006633 | fatty acid biosynthetic process | 1 | Biological Process: fatty acid biosynthetic process (GO:0006633);; Cellular Component: plastid (GO:0009536);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: transferase activity, transferring acyl groups other than amino-acyl groups (GO:0016747);;  | 3-ketoacyl-CoA synthase 17 | PREDICTED: 3-ketoacyl-CoA synthase 17-like [Musa acuminata subsp. malaccensis] | -6.68080644846177 | -0.676840276697401 | 0.0026660174210626 | 0.860746783865706 | 0.772855688700171 | 0.0134213167882446 | 0.638123698572018 | 0.58989787244083 | 0.0744752898512627 | 0.620737816555796 | 0.601133042022685 | 0.0014309144902785 | 0.579887831748127 | 0.566361478770189 | 0.0003507503274869 | True | True


record_id: DS057_R00134
dataset_id: DS057
record_json:
{"gene_id":"Ma08_g13940","robust_pathway_count":"1","robust_module_count":"1","modules":"Cell cycle and microtubules","pathways":"GO:0000082 | G1/S transition of mitotic cell cycle","all_three_pathway_count":"1","GO_annotation":"--","Swiss_Prot_annotation":"Cyclin-B2-2","NR_annotation":"PREDICTED: G2/mitotic-specific cyclin-2 isoform X1 [Musa acuminata subsp. malaccensis]","recovery_log2fc":"0.528381038077689","recovery_shrunk_log2fc":"0.244254541615709","recovery_padj":"0.783145677314082","reciprocal_log2fc":"-0.555174569514121","reciprocal_shrunk_log2fc":"-0.537494969456025","reciprocal_padj":"0.0021273442165885","exclude_pair_log2fc":"-0.615520866585227","exclude_pair_shrunk_log2fc":"-0.569938369951507","exclude_pair_padj":"0.0845323732053214","five_traceable_log2fc":"-0.581359064123065","five_traceable_shrunk_log2fc":"-0.561934082641968","five_traceable_padj":"0.0043095914304803","paper_counts_log2fc":"-0.661575098391114","paper_counts_shrunk_log2fc":"-0.650824336012478","paper_counts_padj":"4.35230968964838e-07","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma08_g13940 | 1 | 1 | Cell cycle and microtubules | GO:0000082 | G1/S transition of mitotic cell cycle | 1 | -- | Cyclin-B2-2 | PREDICTED: G2/mitotic-specific cyclin-2 isoform X1 [Musa acuminata subsp. malaccensis] | 0.528381038077689 | 0.244254541615709 | 0.783145677314082 | -0.555174569514121 | -0.537494969456025 | 0.0021273442165885 | -0.615520866585227 | -0.569938369951507 | 0.0845323732053214 | -0.581359064123065 | -0.561934082641968 | 0.0043095914304803 | -0.661575098391114 | -0.650824336012478 | 4.35230968964838e-07 | True | True


record_id: DS057_R00135
dataset_id: DS057
record_json:
{"gene_id":"Ma08_g15290","robust_pathway_count":"1","robust_module_count":"1","modules":"RNA and ribosome biogenesis","pathways":"GO:0001522 | pseudouridine synthesis","all_three_pathway_count":"1","GO_annotation":"Biological Process: box H/ACA snoRNA 3'-end processing (GO:0000495);; Molecular Function: RNA binding (GO:0003723);; Molecular Function: pseudouridine synthase activity (GO:0009982);; Biological Process: rRNA pseudouridine synthesis (GO:0031118);; Biological Process: snRNA pseudouridine synthesis (GO:0031120);; Cellular Component: box H/ACA snoRNP complex (GO:0031429);; Biological Process: mRNA pseudouridine synthesis (GO:1990481);; ","Swiss_Prot_annotation":"H/ACA ribonucleoprotein complex subunit 4","NR_annotation":"PREDICTED: H/ACA ribonucleoprotein complex subunit 4-like [Musa acuminata subsp. malaccensis]","recovery_log2fc":"0.907197070705047","recovery_shrunk_log2fc":"0.493077060523591","recovery_padj":"0.427550255584489","reciprocal_log2fc":"-0.472754347918092","reciprocal_shrunk_log2fc":"-0.436964374128706","reciprocal_padj":"0.147444691115957","exclude_pair_log2fc":"-0.533086574837211","exclude_pair_shrunk_log2fc":"-0.478684191134101","exclude_pair_padj":"0.260025562065416","five_traceable_log2fc":"-0.599221382029762","five_traceable_shrunk_log2fc":"-0.562754184151664","five_traceable_padj":"0.0409989639750415","paper_counts_log2fc":"-0.682893196627509","paper_counts_shrunk_log2fc":"-0.656376671252003","paper_counts_padj":"0.0013673756678271","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma08_g15290 | 1 | 1 | RNA and ribosome biogenesis | GO:0001522 | pseudouridine synthesis | 1 | Biological Process: box H/ACA snoRNA 3'-end processing (GO:0000495);; Molecular Function: RNA binding (GO:0003723);; Molecular Function: pseudouridine synthase activity (GO:0009982);; Biological Process: rRNA pseudouridine synthesis (GO:0031118);; Biological Process: snRNA pseudouridine synthesis (GO:0031120);; Cellular Component: box H/ACA snoRNP complex (GO:0031429);; Biological Process: mRNA pseudouridine synthesis (GO:1990481);;  | H/ACA ribonucleoprotein complex subunit 4 | PREDICTED: H/ACA ribonucleoprotein complex subunit 4-like [Musa acuminata subsp. malaccensis] | 0.907197070705047 | 0.493077060523591 | 0.427550255584489 | -0.472754347918092 | -0.436964374128706 | 0.147444691115957 | -0.533086574837211 | -0.478684191134101 | 0.260025562065416 | -0.599221382029762 | -0.562754184151664 | 0.0409989639750415 | -0.682893196627509 | -0.656376671252003 | 0.0013673756678271 | True | True


record_id: DS057_R00136
dataset_id: DS057
record_json:
{"gene_id":"Ma08_g22320","robust_pathway_count":"1","robust_module_count":"1","modules":"Lipid-ethylene metabolism","pathways":"GO:0009873 | ethylene-activated signaling pathway","all_three_pathway_count":"1","GO_annotation":"--","Swiss_Prot_annotation":"ETHYLENE INSENSITIVE 3-like 1 protein","NR_annotation":"PREDICTED: ETHYLENE INSENSITIVE 3-like 1 protein [Musa acuminata subsp. malaccensis] ","recovery_log2fc":"-3.36671325450136","recovery_shrunk_log2fc":"-0.665750893457886","recovery_padj":"0.0619430323496639","reciprocal_log2fc":"0.607694502127629","reciprocal_shrunk_log2fc":"0.587047601395107","reciprocal_padj":"0.001008434088461","exclude_pair_log2fc":"0.598270429731693","exclude_pair_shrunk_log2fc":"0.55063536523713","exclude_pair_padj":"0.114199266775637","five_traceable_log2fc":"0.61412002192062","five_traceable_shrunk_log2fc":"0.591889719092093","five_traceable_padj":"0.0036844017548802","paper_counts_log2fc":"0.661709573835828","paper_counts_shrunk_log2fc":"0.650616601333836","paper_counts_padj":"6.75416249954393e-07","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma08_g22320 | 1 | 1 | Lipid-ethylene metabolism | GO:0009873 | ethylene-activated signaling pathway | 1 | -- | ETHYLENE INSENSITIVE 3-like 1 protein | PREDICTED: ETHYLENE INSENSITIVE 3-like 1 protein [Musa acuminata subsp. malaccensis]  | -3.36671325450136 | -0.665750893457886 | 0.0619430323496639 | 0.607694502127629 | 0.587047601395107 | 0.001008434088461 | 0.598270429731693 | 0.55063536523713 | 0.114199266775637 | 0.61412002192062 | 0.591889719092093 | 0.0036844017548802 | 0.661709573835828 | 0.650616601333836 | 6.75416249954393e-07 | True | True


record_id: DS057_R00137
dataset_id: DS057
record_json:
{"gene_id":"Ma08_g23640","robust_pathway_count":"1","robust_module_count":"1","modules":"RNA and ribosome biogenesis","pathways":"GO:0008033 | tRNA processing","all_three_pathway_count":"1","GO_annotation":"--","Swiss_Prot_annotation":"Elongator complex protein 2","NR_annotation":"PREDICTED: elongator complex protein 2 [Musa acuminata subsp. malaccensis]","recovery_log2fc":"0.613610210180092","recovery_shrunk_log2fc":"0.417214177320415","recovery_padj":"0.495291845369765","reciprocal_log2fc":"-0.372148010431252","reciprocal_shrunk_log2fc":"-0.357662925919918","reciprocal_padj":"0.0957513562316191","exclude_pair_log2fc":"-0.41887441573674","exclude_pair_shrunk_log2fc":"-0.383777076690142","exclude_pair_padj":"0.346836526324659","five_traceable_log2fc":"-0.420519850464334","five_traceable_shrunk_log2fc":"-0.404359299298629","five_traceable_padj":"0.0735062541362966","paper_counts_log2fc":"-0.485076957603223","paper_counts_shrunk_log2fc":"-0.476627526571485","paper_counts_padj":"0.0005425994779709","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma08_g23640 | 1 | 1 | RNA and ribosome biogenesis | GO:0008033 | tRNA processing | 1 | -- | Elongator complex protein 2 | PREDICTED: elongator complex protein 2 [Musa acuminata subsp. malaccensis] | 0.613610210180092 | 0.417214177320415 | 0.495291845369765 | -0.372148010431252 | -0.357662925919918 | 0.0957513562316191 | -0.41887441573674 | -0.383777076690142 | 0.346836526324659 | -0.420519850464334 | -0.404359299298629 | 0.0735062541362966 | -0.485076957603223 | -0.476627526571485 | 0.0005425994779709 | True | True


record_id: DS057_R00138
dataset_id: DS057
record_json:
{"gene_id":"Ma08_g30080","robust_pathway_count":"1","robust_module_count":"1","modules":"RNA and ribosome biogenesis","pathways":"GO:0008033 | tRNA processing","all_three_pathway_count":"1","GO_annotation":"--","Swiss_Prot_annotation":"Proteinaceous RNase P 2","NR_annotation":"PREDICTED: proteinaceous RNase P 2 [Musa acuminata subsp. malaccensis]","recovery_log2fc":"0.908256394997516","recovery_shrunk_log2fc":"0.350007779448977","recovery_padj":"0.625856233732128","reciprocal_log2fc":"-0.489427202831044","reciprocal_shrunk_log2fc":"-0.433028163130123","reciprocal_padj":"0.25600175660208","exclude_pair_log2fc":"-0.705438193694627","exclude_pair_shrunk_log2fc":"-0.63902575663273","exclude_pair_padj":"0.0823790293913932","five_traceable_log2fc":"-0.733208896178865","five_traceable_shrunk_log2fc":"-0.70232773385964","five_traceable_padj":"0.0011749874790228","paper_counts_log2fc":"-0.691514007513631","paper_counts_shrunk_log2fc":"-0.67801457337266","paper_counts_padj":"1.65923657003533e-06","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma08_g30080 | 1 | 1 | RNA and ribosome biogenesis | GO:0008033 | tRNA processing | 1 | -- | Proteinaceous RNase P 2 | PREDICTED: proteinaceous RNase P 2 [Musa acuminata subsp. malaccensis] | 0.908256394997516 | 0.350007779448977 | 0.625856233732128 | -0.489427202831044 | -0.433028163130123 | 0.25600175660208 | -0.705438193694627 | -0.63902575663273 | 0.0823790293913932 | -0.733208896178865 | -0.70232773385964 | 0.0011749874790228 | -0.691514007513631 | -0.67801457337266 | 1.65923657003533e-06 | True | True


record_id: DS057_R00139
dataset_id: DS057
record_json:
{"gene_id":"Ma08_g30510","robust_pathway_count":"1","robust_module_count":"1","modules":"Lipid-ethylene metabolism","pathways":"GO:0006631 | fatty acid metabolic process","all_three_pathway_count":"1","GO_annotation":"Molecular Function: fatty-acyl-CoA binding (GO:0000062);; Molecular Function: acyl-CoA dehydrogenase activity (GO:0003995);; Molecular Function: electron carrier activity (GO:0009055);; Biological Process: fatty acid beta-oxidation using acyl-CoA dehydrogenase (GO:0033539);; Molecular Function: flavin adenine dinucleotide binding (GO:0050660);; Molecular Function: oxidoreductase activity, acting on the CH-CH group of donors, with a flavin as acceptor (GO:0052890);; Biological Process: lipid homeostasis (GO:0055088);; ","Swiss_Prot_annotation":"Probable acyl-CoA dehydrogenase IBR3","NR_annotation":"PREDICTED: probable acyl-CoA dehydrogenase IBR3 isoform X2 [Musa acuminata subsp. malaccensis]","recovery_log2fc":"-1.38988746962181","recovery_shrunk_log2fc":"-0.493522334673212","recovery_padj":"0.392893832643567","reciprocal_log2fc":"0.476436063182372","reciprocal_shrunk_log2fc":"0.459131957542411","reciprocal_padj":"0.0183754702649831","exclude_pair_log2fc":"0.48144736817534","exclude_pair_shrunk_log2fc":"0.446924603337022","exclude_pair_padj":"0.202578093493435","five_traceable_log2fc":"0.531675749620008","five_traceable_shrunk_log2fc":"0.513322357107616","five_traceable_padj":"0.0115289806627182","paper_counts_log2fc":"0.540063419638734","paper_counts_shrunk_log2fc":"0.534360598979004","paper_counts_padj":"2.7743966645367e-07","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma08_g30510 | 1 | 1 | Lipid-ethylene metabolism | GO:0006631 | fatty acid metabolic process | 1 | Molecular Function: fatty-acyl-CoA binding (GO:0000062);; Molecular Function: acyl-CoA dehydrogenase activity (GO:0003995);; Molecular Function: electron carrier activity (GO:0009055);; Biological Process: fatty acid beta-oxidation using acyl-CoA dehydrogenase (GO:0033539);; Molecular Function: flavin adenine dinucleotide binding (GO:0050660);; Molecular Function: oxidoreductase activity, acting on the CH-CH group of donors, with a flavin as acceptor (GO:0052890);; Biological Process: lipid homeostasis (GO:0055088);;  | Probable acyl-CoA dehydrogenase IBR3 | PREDICTED: probable acyl-CoA dehydrogenase IBR3 isoform X2 [Musa acuminata subsp. malaccensis] | -1.38988746962181 | -0.493522334673212 | 0.392893832643567 | 0.476436063182372 | 0.459131957542411 | 0.0183754702649831 | 0.48144736817534 | 0.446924603337022 | 0.202578093493435 | 0.531675749620008 | 0.513322357107616 | 0.0115289806627182 | 0.540063419638734 | 0.534360598979004 | 2.7743966645367e-07 | True | True


record_id: DS057_R00140
dataset_id: DS057
record_json:
{"gene_id":"Ma08_g34850","robust_pathway_count":"1","robust_module_count":"1","modules":"RNA and ribosome biogenesis","pathways":"GO:0001522 | pseudouridine synthesis","all_three_pathway_count":"1","GO_annotation":"Molecular Function: RNA binding (GO:0003723);; Cellular Component: mitochondrion (GO:0005739);; Molecular Function: pseudouridine synthase activity (GO:0009982);; Molecular Function: deaminase activity (GO:0019239);; Biological Process: tRNA pseudouridine synthesis (GO:0031119);; ","Swiss_Prot_annotation":"RNA pseudouridine synthase 1","NR_annotation":"PREDICTED: RNA pseudouridine synthase 1 [Musa acuminata subsp. malaccensis]","recovery_log2fc":"0.520466516401046","recovery_shrunk_log2fc":"0.449930630100896","recovery_padj":"0.209518156978659","reciprocal_log2fc":"-0.376544448578289","reciprocal_shrunk_log2fc":"-0.336642479692404","reciprocal_padj":"0.38231129093789","exclude_pair_log2fc":"-0.619786241756163","exclude_pair_shrunk_log2fc":"-0.568009579141205","exclude_pair_padj":"0.109849731420897","five_traceable_log2fc":"-0.614866964923153","five_traceable_shrunk_log2fc":"-0.593496730267731","five_traceable_padj":"0.0029412073085429","paper_counts_log2fc":"-0.61232371221204","paper_counts_shrunk_log2fc":"-0.602176410122873","paper_counts_padj":"4.27795794494433e-06","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma08_g34850 | 1 | 1 | RNA and ribosome biogenesis | GO:0001522 | pseudouridine synthesis | 1 | Molecular Function: RNA binding (GO:0003723);; Cellular Component: mitochondrion (GO:0005739);; Molecular Function: pseudouridine synthase activity (GO:0009982);; Molecular Function: deaminase activity (GO:0019239);; Biological Process: tRNA pseudouridine synthesis (GO:0031119);;  | RNA pseudouridine synthase 1 | PREDICTED: RNA pseudouridine synthase 1 [Musa acuminata subsp. malaccensis] | 0.520466516401046 | 0.449930630100896 | 0.209518156978659 | -0.376544448578289 | -0.336642479692404 | 0.38231129093789 | -0.619786241756163 | -0.568009579141205 | 0.109849731420897 | -0.614866964923153 | -0.593496730267731 | 0.0029412073085429 | -0.61232371221204 | -0.602176410122873 | 4.27795794494433e-06 | True | True


record_id: DS057_R00141
dataset_id: DS057
record_json:
{"gene_id":"Ma09_g03360","robust_pathway_count":"1","robust_module_count":"1","modules":"RNA and ribosome biogenesis","pathways":"GO:0006364 | rRNA processing","all_three_pathway_count":"1","GO_annotation":"Biological Process: enzyme-directed rRNA 2'-O-methylation (GO:0000453);; Molecular Function: rRNA (uridine-2'-O-)-methyltransferase activity (GO:0008650);; ","Swiss_Prot_annotation":"--","NR_annotation":"PREDICTED: uncharacterized protein LOC103996848 isoform X1 [Musa acuminata subsp. malaccensis]","recovery_log2fc":"0.330653905244092","recovery_shrunk_log2fc":"0.242359290300171","recovery_padj":"0.747300643758481","reciprocal_log2fc":"-0.46677502736976","reciprocal_shrunk_log2fc":"-0.434595607056892","reciprocal_padj":"0.12948725251938","exclude_pair_log2fc":"-0.384491084143482","exclude_pair_shrunk_log2fc":"-0.340379726220825","exclude_pair_padj":"0.503697424867501","five_traceable_log2fc":"-0.490836441928602","five_traceable_shrunk_log2fc":"-0.455612935159481","five_traceable_padj":"0.146465760674107","paper_counts_log2fc":"-0.32675696554327","paper_counts_shrunk_log2fc":"-0.301239575108813","paper_counts_padj":"0.366667126537511","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma09_g03360 | 1 | 1 | RNA and ribosome biogenesis | GO:0006364 | rRNA processing | 1 | Biological Process: enzyme-directed rRNA 2'-O-methylation (GO:0000453);; Molecular Function: rRNA (uridine-2'-O-)-methyltransferase activity (GO:0008650);;  | -- | PREDICTED: uncharacterized protein LOC103996848 isoform X1 [Musa acuminata subsp. malaccensis] | 0.330653905244092 | 0.242359290300171 | 0.747300643758481 | -0.46677502736976 | -0.434595607056892 | 0.12948725251938 | -0.384491084143482 | -0.340379726220825 | 0.503697424867501 | -0.490836441928602 | -0.455612935159481 | 0.146465760674107 | -0.32675696554327 | -0.301239575108813 | 0.366667126537511 | True | True


record_id: DS057_R00142
dataset_id: DS057
record_json:
{"gene_id":"Ma09_g08090","robust_pathway_count":"1","robust_module_count":"1","modules":"RNA and ribosome biogenesis","pathways":"GO:0008033 | tRNA processing","all_three_pathway_count":"1","GO_annotation":"Molecular Function: nucleic acid binding (GO:0003676);; Biological Process: tRNA modification (GO:0006400);; Molecular Function: methyltransferase activity (GO:0008168);; Biological Process: methylation (GO:0032259);; Biological Process: 2-methylguanosine metabolic process (GO:0080180);; ","Swiss_Prot_annotation":"--","NR_annotation":"PREDICTED: tRNA (guanine(10)-N2)-methyltransferase homolog [Musa acuminata subsp. malaccensis]","recovery_log2fc":"0.874404180436736","recovery_shrunk_log2fc":"0.394973001107913","recovery_padj":"0.566494747257707","reciprocal_log2fc":"-0.425007468224294","reciprocal_shrunk_log2fc":"-0.38732221227436","reciprocal_padj":"0.253208073410988","exclude_pair_log2fc":"-0.387645840762618","exclude_pair_shrunk_log2fc":"-0.343345588371253","exclude_pair_padj":"0.497840722561368","five_traceable_log2fc":"-0.292960465330095","five_traceable_shrunk_log2fc":"-0.269970911451572","five_traceable_padj":"0.456338509906023","paper_counts_log2fc":"-0.410301613482863","paper_counts_shrunk_log2fc":"-0.39241223183053","paper_counts_padj":"0.093463409044682","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma09_g08090 | 1 | 1 | RNA and ribosome biogenesis | GO:0008033 | tRNA processing | 1 | Molecular Function: nucleic acid binding (GO:0003676);; Biological Process: tRNA modification (GO:0006400);; Molecular Function: methyltransferase activity (GO:0008168);; Biological Process: methylation (GO:0032259);; Biological Process: 2-methylguanosine metabolic process (GO:0080180);;  | -- | PREDICTED: tRNA (guanine(10)-N2)-methyltransferase homolog [Musa acuminata subsp. malaccensis] | 0.874404180436736 | 0.394973001107913 | 0.566494747257707 | -0.425007468224294 | -0.38732221227436 | 0.253208073410988 | -0.387645840762618 | -0.343345588371253 | 0.497840722561368 | -0.292960465330095 | -0.269970911451572 | 0.456338509906023 | -0.410301613482863 | -0.39241223183053 | 0.093463409044682 | True | True


record_id: DS057_R00143
dataset_id: DS057
record_json:
{"gene_id":"Ma09_g24140","robust_pathway_count":"1","robust_module_count":"1","modules":"RNA and ribosome biogenesis","pathways":"GO:0006364 | rRNA processing","all_three_pathway_count":"1","GO_annotation":"Biological Process: cleavage involved in rRNA processing (GO:0000469);; Molecular Function: endoribonuclease activity (GO:0004521);; Biological Process: maturation of SSU-rRNA (GO:0030490);; Cellular Component: preribosome, small subunit precursor (GO:0030688);; Biological Process: gametophyte development (GO:0048229);; ","Swiss_Prot_annotation":"--","NR_annotation":"PREDICTED: RNA-binding protein NOB1 [Musa acuminata subsp. malaccensis]","recovery_log2fc":"0.893443906292708","recovery_shrunk_log2fc":"0.560331160976462","recovery_padj":"0.3086675069549","reciprocal_log2fc":"-0.252078877185844","reciprocal_shrunk_log2fc":"-0.240980632364613","reciprocal_padj":"0.340261959132887","exclude_pair_log2fc":"-0.318023182722045","exclude_pair_shrunk_log2fc":"-0.291193981477341","exclude_pair_padj":"0.51432997689235","five_traceable_log2fc":"-0.267661981696857","five_traceable_shrunk_log2fc":"-0.255326843482134","five_traceable_padj":"0.349576024253188","paper_counts_log2fc":"-0.283393300394215","paper_counts_shrunk_log2fc":"-0.276474391943122","paper_counts_padj":"0.121581039223431","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma09_g24140 | 1 | 1 | RNA and ribosome biogenesis | GO:0006364 | rRNA processing | 1 | Biological Process: cleavage involved in rRNA processing (GO:0000469);; Molecular Function: endoribonuclease activity (GO:0004521);; Biological Process: maturation of SSU-rRNA (GO:0030490);; Cellular Component: preribosome, small subunit precursor (GO:0030688);; Biological Process: gametophyte development (GO:0048229);;  | -- | PREDICTED: RNA-binding protein NOB1 [Musa acuminata subsp. malaccensis] | 0.893443906292708 | 0.560331160976462 | 0.3086675069549 | -0.252078877185844 | -0.240980632364613 | 0.340261959132887 | -0.318023182722045 | -0.291193981477341 | 0.51432997689235 | -0.267661981696857 | -0.255326843482134 | 0.349576024253188 | -0.283393300394215 | -0.276474391943122 | 0.121581039223431 | True | True


record_id: DS057_R00144
dataset_id: DS057
record_json:
{"gene_id":"Ma09_g28860","robust_pathway_count":"1","robust_module_count":"1","modules":"Cell cycle and microtubules","pathways":"GO:0005874 | microtubule","all_three_pathway_count":"1","GO_annotation":"Molecular Function: nucleotide binding (GO:0000166);; Molecular Function: hydrolase activity (GO:0016787);; ","Swiss_Prot_annotation":"Kinesin-like protein KIN-4C","NR_annotation":"PREDICTED: kinesin-like protein KIN-4C [Musa acuminata subsp. malaccensis]","recovery_log2fc":"0.333556416186079","recovery_shrunk_log2fc":"0.234612384691788","recovery_padj":"0.76782320866777","reciprocal_log2fc":"-0.708166323544398","reciprocal_shrunk_log2fc":"-0.671737656729558","reciprocal_padj":"0.0023180867940286","exclude_pair_log2fc":"-0.715919397570578","exclude_pair_shrunk_log2fc":"-0.652197948361314","exclude_pair_padj":"0.0652798816387696","five_traceable_log2fc":"-0.66407934058925","five_traceable_shrunk_log2fc":"-0.629860758094151","five_traceable_padj":"0.0104534363744958","paper_counts_log2fc":"-0.710396880278511","paper_counts_shrunk_log2fc":"-0.689863235625306","paper_counts_padj":"7.4768764012664e-05","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma09_g28860 | 1 | 1 | Cell cycle and microtubules | GO:0005874 | microtubule | 1 | Molecular Function: nucleotide binding (GO:0000166);; Molecular Function: hydrolase activity (GO:0016787);;  | Kinesin-like protein KIN-4C | PREDICTED: kinesin-like protein KIN-4C [Musa acuminata subsp. malaccensis] | 0.333556416186079 | 0.234612384691788 | 0.76782320866777 | -0.708166323544398 | -0.671737656729558 | 0.0023180867940286 | -0.715919397570578 | -0.652197948361314 | 0.0652798816387696 | -0.66407934058925 | -0.629860758094151 | 0.0104534363744958 | -0.710396880278511 | -0.689863235625306 | 7.4768764012664e-05 | True | True


record_id: DS057_R00145
dataset_id: DS057
record_json:
{"gene_id":"Ma09_g29140","robust_pathway_count":"1","robust_module_count":"1","modules":"Lipid-ethylene metabolism","pathways":"GO:0009873 | ethylene-activated signaling pathway","all_three_pathway_count":"1","GO_annotation":"--","Swiss_Prot_annotation":"EIN3-binding F-box protein 1","NR_annotation":"PREDICTED: EIN3-binding F-box protein 1-like [Musa acuminata subsp. malaccensis]","recovery_log2fc":"-1.4330021435903","recovery_shrunk_log2fc":"-0.25765415043008","recovery_padj":"0.659382127516746","reciprocal_log2fc":"1.48550982523845","reciprocal_shrunk_log2fc":"1.11238566992214","reciprocal_padj":"0.0126663169352317","exclude_pair_log2fc":"1.0806615137236","exclude_pair_shrunk_log2fc":"1.00035727849295","exclude_pair_padj":"0.000456498047832","five_traceable_log2fc":"1.05600058204672","five_traceable_shrunk_log2fc":"1.01898879292123","five_traceable_padj":"4.43706282290134e-08","paper_counts_log2fc":"1.12481095607506","paper_counts_shrunk_log2fc":"1.06731725406495","paper_counts_padj":"2.1901983524601e-06","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma09_g29140 | 1 | 1 | Lipid-ethylene metabolism | GO:0009873 | ethylene-activated signaling pathway | 1 | -- | EIN3-binding F-box protein 1 | PREDICTED: EIN3-binding F-box protein 1-like [Musa acuminata subsp. malaccensis] | -1.4330021435903 | -0.25765415043008 | 0.659382127516746 | 1.48550982523845 | 1.11238566992214 | 0.0126663169352317 | 1.0806615137236 | 1.00035727849295 | 0.000456498047832 | 1.05600058204672 | 1.01898879292123 | 4.43706282290134e-08 | 1.12481095607506 | 1.06731725406495 | 2.1901983524601e-06 | True | True


record_id: DS057_R00146
dataset_id: DS057
record_json:
{"gene_id":"Ma10_g04640","robust_pathway_count":"1","robust_module_count":"1","modules":"RNA and ribosome biogenesis","pathways":"GO:0005730 | nucleolus","all_three_pathway_count":"1","GO_annotation":"--","Swiss_Prot_annotation":"Histone deacetylase HDT1","NR_annotation":"PREDICTED: histone deacetylase HDT2-like [Musa acuminata subsp. malaccensis]","recovery_log2fc":"0.284329372183721","recovery_shrunk_log2fc":"0.217282036527876","recovery_padj":"0.768504997148131","reciprocal_log2fc":"-0.532988847816567","reciprocal_shrunk_log2fc":"-0.512253290092922","reciprocal_padj":"0.0097330306427146","exclude_pair_log2fc":"-0.611150640853887","exclude_pair_shrunk_log2fc":"-0.570218728947493","exclude_pair_padj":"0.066632468597116","five_traceable_log2fc":"-0.631011933584037","five_traceable_shrunk_log2fc":"-0.6145296679322","five_traceable_padj":"0.0002840137684794","paper_counts_log2fc":"-0.673730513398611","paper_counts_shrunk_log2fc":"-0.664305704177283","paper_counts_padj":"2.1769591683907e-08","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma10_g04640 | 1 | 1 | RNA and ribosome biogenesis | GO:0005730 | nucleolus | 1 | -- | Histone deacetylase HDT1 | PREDICTED: histone deacetylase HDT2-like [Musa acuminata subsp. malaccensis] | 0.284329372183721 | 0.217282036527876 | 0.768504997148131 | -0.532988847816567 | -0.512253290092922 | 0.0097330306427146 | -0.611150640853887 | -0.570218728947493 | 0.066632468597116 | -0.631011933584037 | -0.6145296679322 | 0.0002840137684794 | -0.673730513398611 | -0.664305704177283 | 2.1769591683907e-08 | True | True


record_id: DS057_R00147
dataset_id: DS057
record_json:
{"gene_id":"Ma10_g09560","robust_pathway_count":"1","robust_module_count":"1","modules":"Cell cycle and microtubules","pathways":"GO:0005874 | microtubule","all_three_pathway_count":"1","GO_annotation":"Biological Process: microtubule cytoskeleton organization (GO:0000226);; Cellular Component: microtubule organizing center (GO:0005815);; Biological Process: cell cycle process (GO:0022402);; Biological Process: cellular component assembly (GO:0022607);; Biological Process: supramolecular fiber organization (GO:0097435);; ","Swiss_Prot_annotation":"Gamma-tubulin complex component 4","NR_annotation":"PREDICTED: uncharacterized protein LOC104000382 isoform X2 [Musa acuminata subsp. malaccensis]","recovery_log2fc":"1.30233944100748","recovery_shrunk_log2fc":"0.361727508244416","recovery_padj":"0.550861534233953","reciprocal_log2fc":"-0.572569847573196","reciprocal_shrunk_log2fc":"-0.528114033762004","reciprocal_padj":"0.0708874659689029","exclude_pair_log2fc":"-0.623182347293877","exclude_pair_shrunk_log2fc":"-0.546866961861028","exclude_pair_padj":"0.225477924989558","five_traceable_log2fc":"-0.58453398192372","five_traceable_shrunk_log2fc":"-0.537959371852684","five_traceable_padj":"0.0947887835386863","paper_counts_log2fc":"-0.576954687039917","paper_counts_shrunk_log2fc":"-0.559267363569576","paper_counts_padj":"0.0023657690405245","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma10_g09560 | 1 | 1 | Cell cycle and microtubules | GO:0005874 | microtubule | 1 | Biological Process: microtubule cytoskeleton organization (GO:0000226);; Cellular Component: microtubule organizing center (GO:0005815);; Biological Process: cell cycle process (GO:0022402);; Biological Process: cellular component assembly (GO:0022607);; Biological Process: supramolecular fiber organization (GO:0097435);;  | Gamma-tubulin complex component 4 | PREDICTED: uncharacterized protein LOC104000382 isoform X2 [Musa acuminata subsp. malaccensis] | 1.30233944100748 | 0.361727508244416 | 0.550861534233953 | -0.572569847573196 | -0.528114033762004 | 0.0708874659689029 | -0.623182347293877 | -0.546866961861028 | 0.225477924989558 | -0.58453398192372 | -0.537959371852684 | 0.0947887835386863 | -0.576954687039917 | -0.559267363569576 | 0.0023657690405245 | True | True


record_id: DS057_R00148
dataset_id: DS057
record_json:
{"gene_id":"Ma10_g10570","robust_pathway_count":"1","robust_module_count":"1","modules":"RNA and ribosome biogenesis","pathways":"GO:0005730 | nucleolus","all_three_pathway_count":"1","GO_annotation":"--","Swiss_Prot_annotation":"--","NR_annotation":"PREDICTED: protein MAK16 homolog [Musa acuminata subsp. malaccensis]","recovery_log2fc":"0.49946117422341","recovery_shrunk_log2fc":"0.375021843591585","recovery_padj":"0.514018983005111","reciprocal_log2fc":"-0.167007572124276","reciprocal_shrunk_log2fc":"-0.159065794675438","reciprocal_padj":"0.581337357177751","exclude_pair_log2fc":"-0.248524221703342","exclude_pair_shrunk_log2fc":"-0.229430831969288","exclude_pair_padj":"0.613737041454639","five_traceable_log2fc":"-0.276981320602595","five_traceable_shrunk_log2fc":"-0.267953749495988","five_traceable_padj":"0.227297747827505","paper_counts_log2fc":"-0.305689410755903","paper_counts_shrunk_log2fc":"-0.299675459585665","paper_counts_padj":"0.0556339557996707","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma10_g10570 | 1 | 1 | RNA and ribosome biogenesis | GO:0005730 | nucleolus | 1 | -- | -- | PREDICTED: protein MAK16 homolog [Musa acuminata subsp. malaccensis] | 0.49946117422341 | 0.375021843591585 | 0.514018983005111 | -0.167007572124276 | -0.159065794675438 | 0.581337357177751 | -0.248524221703342 | -0.229430831969288 | 0.613737041454639 | -0.276981320602595 | -0.267953749495988 | 0.227297747827505 | -0.305689410755903 | -0.299675459585665 | 0.0556339557996707 | True | True


record_id: DS057_R00149
dataset_id: DS057
record_json:
{"gene_id":"Ma10_g12340","robust_pathway_count":"1","robust_module_count":"1","modules":"Lipid-ethylene metabolism","pathways":"GO:0009873 | ethylene-activated signaling pathway","all_three_pathway_count":"1","GO_annotation":"Molecular Function: DNA binding (GO:0003677);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; ","Swiss_Prot_annotation":"Ethylene-responsive transcription factor ERF115","NR_annotation":"PREDICTED: ethylene-responsive transcription factor ERF113-like [Musa acuminata subsp. malaccensis]","recovery_log2fc":"-0.593547887984526","recovery_shrunk_log2fc":"-0.413987204955255","recovery_padj":"0.489014569410034","reciprocal_log2fc":"1.91536428769667","reciprocal_shrunk_log2fc":"1.34940374129481","reciprocal_padj":"0.003227453729707","exclude_pair_log2fc":"1.68258196317867","exclude_pair_shrunk_log2fc":"0.965449878249986","exclude_pair_padj":"0.133536996841541","five_traceable_log2fc":"1.75012333844663","five_traceable_shrunk_log2fc":"1.24917116727677","five_traceable_padj":"0.0128087639497135","paper_counts_log2fc":"1.53918786848561","paper_counts_shrunk_log2fc":"1.20408324887512","paper_counts_padj":"0.0069456018086204","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma10_g12340 | 1 | 1 | Lipid-ethylene metabolism | GO:0009873 | ethylene-activated signaling pathway | 1 | Molecular Function: DNA binding (GO:0003677);; Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);;  | Ethylene-responsive transcription factor ERF115 | PREDICTED: ethylene-responsive transcription factor ERF113-like [Musa acuminata subsp. malaccensis] | -0.593547887984526 | -0.413987204955255 | 0.489014569410034 | 1.91536428769667 | 1.34940374129481 | 0.003227453729707 | 1.68258196317867 | 0.965449878249986 | 0.133536996841541 | 1.75012333844663 | 1.24917116727677 | 0.0128087639497135 | 1.53918786848561 | 1.20408324887512 | 0.0069456018086204 | True | True


record_id: DS057_R00150
dataset_id: DS057
record_json:
{"gene_id":"Ma10_g12970","robust_pathway_count":"1","robust_module_count":"1","modules":"Lipid-ethylene metabolism","pathways":"GO:0009873 | ethylene-activated signaling pathway","all_three_pathway_count":"1","GO_annotation":"Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; ","Swiss_Prot_annotation":"Protein ETHYLENE INSENSITIVE 3","NR_annotation":"PREDICTED: ETHYLENE INSENSITIVE 3-like 1 protein [Musa acuminata subsp. malaccensis] ","recovery_log2fc":"-4.6670437267411","recovery_shrunk_log2fc":"-0.327201495891902","recovery_padj":"0.174417852213522","reciprocal_log2fc":"1.12823460732096","reciprocal_shrunk_log2fc":"1.02555409954253","reciprocal_padj":"0.0002384279270817","exclude_pair_log2fc":"1.28705550326017","exclude_pair_shrunk_log2fc":"1.1563440307849","exclude_pair_padj":"0.0004291409670841","five_traceable_log2fc":"1.33281695645555","five_traceable_shrunk_log2fc":"1.24585621269144","five_traceable_padj":"7.93969015403449e-07","paper_counts_log2fc":"1.45138286567783","paper_counts_shrunk_log2fc":"1.39974851777744","paper_counts_padj":"2.42069341747071e-14","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma10_g12970 | 1 | 1 | Lipid-ethylene metabolism | GO:0009873 | ethylene-activated signaling pathway | 1 | Molecular Function: transcription factor activity, sequence-specific DNA binding (GO:0003700);; Cellular Component: nucleus (GO:0005634);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);;  | Protein ETHYLENE INSENSITIVE 3 | PREDICTED: ETHYLENE INSENSITIVE 3-like 1 protein [Musa acuminata subsp. malaccensis]  | -4.6670437267411 | -0.327201495891902 | 0.174417852213522 | 1.12823460732096 | 1.02555409954253 | 0.0002384279270817 | 1.28705550326017 | 1.1563440307849 | 0.0004291409670841 | 1.33281695645555 | 1.24585621269144 | 7.93969015403449e-07 | 1.45138286567783 | 1.39974851777744 | 2.42069341747071e-14 | True | True


record_id: DS057_R00151
dataset_id: DS057
record_json:
{"gene_id":"Ma10_g18130","robust_pathway_count":"1","robust_module_count":"1","modules":"Cell cycle and microtubules","pathways":"GO:0000082 | G1/S transition of mitotic cell cycle","all_three_pathway_count":"1","GO_annotation":"Cellular Component: nucleus (GO:0005634);; ","Swiss_Prot_annotation":"Cyclin-A3-1","NR_annotation":"PREDICTED: cyclin-A3-1-like [Musa acuminata subsp. malaccensis]","recovery_log2fc":"0.44324636263262","recovery_shrunk_log2fc":"0.245130785043374","recovery_padj":"0.782541423786135","reciprocal_log2fc":"-1.11096992483834","reciprocal_shrunk_log2fc":"-1.06641493603731","reciprocal_padj":"2.1642291971705103e-09","exclude_pair_log2fc":"-1.07117978996947","exclude_pair_shrunk_log2fc":"-0.984883629125968","exclude_pair_padj":"0.001015697822115","five_traceable_log2fc":"-1.13926323717887","five_traceable_shrunk_log2fc":"-1.09152053437358","five_traceable_padj":"8.80111664041757e-08","paper_counts_log2fc":"-1.72284084763886","paper_counts_shrunk_log2fc":"-1.60203423629874","paper_counts_padj":"3.96877347655388e-10","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma10_g18130 | 1 | 1 | Cell cycle and microtubules | GO:0000082 | G1/S transition of mitotic cell cycle | 1 | Cellular Component: nucleus (GO:0005634);;  | Cyclin-A3-1 | PREDICTED: cyclin-A3-1-like [Musa acuminata subsp. malaccensis] | 0.44324636263262 | 0.245130785043374 | 0.782541423786135 | -1.11096992483834 | -1.06641493603731 | 2.1642291971705103e-09 | -1.07117978996947 | -0.984883629125968 | 0.001015697822115 | -1.13926323717887 | -1.09152053437358 | 8.80111664041757e-08 | -1.72284084763886 | -1.60203423629874 | 3.96877347655388e-10 | True | True


record_id: DS057_R00152
dataset_id: DS057
record_json:
{"gene_id":"Ma10_g18290","robust_pathway_count":"1","robust_module_count":"1","modules":"Lipid-ethylene metabolism","pathways":"GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","all_three_pathway_count":"1","GO_annotation":"Molecular Function: UDP-glucose 6-dehydrogenase activity (GO:0003979);; Molecular Function: NAD binding (GO:0051287);; Biological Process: oxidation-reduction process (GO:0055114);; ","Swiss_Prot_annotation":"UDP-glucose 6-dehydrogenase 4","NR_annotation":"PREDICTED: UDP-glucose 6-dehydrogenase 4-like [Musa acuminata subsp. malaccensis] ","recovery_log2fc":"-2.77361931059563","recovery_shrunk_log2fc":"-0.352570546989222","recovery_padj":"0.337951244697064","reciprocal_log2fc":"1.00987636200964","reciprocal_shrunk_log2fc":"0.811072295475697","reciprocal_padj":"0.0597720909175135","exclude_pair_log2fc":"0.981849606870602","exclude_pair_shrunk_log2fc":"0.750992699588306","exclude_pair_padj":"0.188900665259875","five_traceable_log2fc":"0.939124617389422","five_traceable_shrunk_log2fc":"0.755123649613661","five_traceable_padj":"0.108764360227034","paper_counts_log2fc":"2.0969779819997","paper_counts_shrunk_log2fc":"0.221768779571082","paper_counts_padj":"0.558943887656015","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma10_g18290 | 1 | 1 | Lipid-ethylene metabolism | GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | 1 | Molecular Function: UDP-glucose 6-dehydrogenase activity (GO:0003979);; Molecular Function: NAD binding (GO:0051287);; Biological Process: oxidation-reduction process (GO:0055114);;  | UDP-glucose 6-dehydrogenase 4 | PREDICTED: UDP-glucose 6-dehydrogenase 4-like [Musa acuminata subsp. malaccensis]  | -2.77361931059563 | -0.352570546989222 | 0.337951244697064 | 1.00987636200964 | 0.811072295475697 | 0.0597720909175135 | 0.981849606870602 | 0.750992699588306 | 0.188900665259875 | 0.939124617389422 | 0.755123649613661 | 0.108764360227034 | 2.0969779819997 | 0.221768779571082 | 0.558943887656015 | True | True


record_id: DS057_R00153
dataset_id: DS057
record_json:
{"gene_id":"Ma10_g30300","robust_pathway_count":"1","robust_module_count":"1","modules":"RNA and ribosome biogenesis","pathways":"GO:0006364 | rRNA processing","all_three_pathway_count":"1","GO_annotation":"Cellular Component: nuclear exosome (RNase complex) (GO:0000176);; Cellular Component: cytoplasmic exosome (RNase complex) (GO:0000177);; Biological Process: exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (GO:0000467);; Molecular Function: RNA binding (GO:0003723);; Cellular Component: mitochondrion (GO:0005739);; Biological Process: nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5' (GO:0034427);; Biological Process: U4 snRNA 3'-end processing (GO:0034475);; Biological Process: exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay (GO:0043928);; Biological Process: CUT catabolic process (GO:0071034);; Biological Process: nuclear polyadenylation-dependent rRNA catabolic process (GO:0071035);; Biological Process: nuclear polyadenylation-dependent tRNA catabolic process (GO:0071038);; Biological Process: nuclear retention of pre-mRNA with aberrant 3'-ends at the site of transcription (GO:0071049);; Biological Process: polyadenylation-dependent snoRNA 3'-end processing (GO:0071051);; ","Swiss_Prot_annotation":"Exosome complex component RRP4 homolog","NR_annotation":"PREDICTED: exosome complex component RRP4 homolog [Musa acuminata subsp. malaccensis]","recovery_log2fc":"0.522904607105868","recovery_shrunk_log2fc":"0.419709924899456","recovery_padj":"0.381292823913073","reciprocal_log2fc":"-0.353320512756761","reciprocal_shrunk_log2fc":"-0.337187910615918","reciprocal_padj":"0.158884821261114","exclude_pair_log2fc":"-0.406728619293266","exclude_pair_shrunk_log2fc":"-0.369099020712811","exclude_pair_padj":"0.399781843776873","five_traceable_log2fc":"-0.410216642696596","five_traceable_shrunk_log2fc":"-0.392011011679318","five_traceable_padj":"0.111852089484206","paper_counts_log2fc":"-0.217754973097106","paper_counts_shrunk_log2fc":"-0.213965521962017","paper_counts_padj":"0.16253308873026","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma10_g30300 | 1 | 1 | RNA and ribosome biogenesis | GO:0006364 | rRNA processing | 1 | Cellular Component: nuclear exosome (RNase complex) (GO:0000176);; Cellular Component: cytoplasmic exosome (RNase complex) (GO:0000177);; Biological Process: exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (GO:0000467);; Molecular Function: RNA binding (GO:0003723);; Cellular Component: mitochondrion (GO:0005739);; Biological Process: nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5' (GO:0034427);; Biological Process: U4 snRNA 3'-end processing (GO:0034475);; Biological Process: exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay (GO:0043928);; Biological Process: CUT catabolic process (GO:0071034);; Biological Process: nuclear polyadenylation-dependent rRNA catabolic process (GO:0071035);; Biological Process: nuclear polyadenylation-dependent tRNA catabolic process (GO:0071038);; Biological Process: nuclear retention of pre-mRNA with aberrant 3'-ends at the site of transcription (GO:0071049);; Biological Process: polyadenylation-dependent snoRNA 3'-end processing (GO:0071051);;  | Exosome complex component RRP4 homolog | PREDICTED: exosome complex component RRP4 homolog [Musa acuminata subsp. malaccensis] | 0.522904607105868 | 0.419709924899456 | 0.381292823913073 | -0.353320512756761 | -0.337187910615918 | 0.158884821261114 | -0.406728619293266 | -0.369099020712811 | 0.399781843776873 | -0.410216642696596 | -0.392011011679318 | 0.111852089484206 | -0.217754973097106 | -0.213965521962017 | 0.16253308873026 | True | True


record_id: DS057_R00154
dataset_id: DS057
record_json:
{"gene_id":"Ma10_g31080","robust_pathway_count":"1","robust_module_count":"1","modules":"Lipid-ethylene metabolism","pathways":"GO:0009873 | ethylene-activated signaling pathway","all_three_pathway_count":"1","GO_annotation":"Biological Process: transcription, DNA-templated (GO:0006351);; ","Swiss_Prot_annotation":"Ethylene-responsive transcription factor 1","NR_annotation":"PREDICTED: ethylene-responsive transcription factor 1-like [Musa acuminata subsp. malaccensis]","recovery_log2fc":"-2.14106782901722","recovery_shrunk_log2fc":"-0.444791328877193","recovery_padj":"0.340978248276913","reciprocal_log2fc":"1.20414595529964","reciprocal_shrunk_log2fc":"1.08371592418235","reciprocal_padj":"0.0001929954808449","exclude_pair_log2fc":"1.30733370449401","exclude_pair_shrunk_log2fc":"1.11692962379673","exclude_pair_padj":"0.0053615435560314","five_traceable_log2fc":"1.35270134707289","five_traceable_shrunk_log2fc":"1.23263727433996","five_traceable_padj":"3.14062381150531e-05","paper_counts_log2fc":"1.27817058648808","paper_counts_shrunk_log2fc":"1.19911986672164","paper_counts_padj":"1.10280784506702e-06","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma10_g31080 | 1 | 1 | Lipid-ethylene metabolism | GO:0009873 | ethylene-activated signaling pathway | 1 | Biological Process: transcription, DNA-templated (GO:0006351);;  | Ethylene-responsive transcription factor 1 | PREDICTED: ethylene-responsive transcription factor 1-like [Musa acuminata subsp. malaccensis] | -2.14106782901722 | -0.444791328877193 | 0.340978248276913 | 1.20414595529964 | 1.08371592418235 | 0.0001929954808449 | 1.30733370449401 | 1.11692962379673 | 0.0053615435560314 | 1.35270134707289 | 1.23263727433996 | 3.14062381150531e-05 | 1.27817058648808 | 1.19911986672164 | 1.10280784506702e-06 | True | True


record_id: DS057_R00155
dataset_id: DS057
record_json:
{"gene_id":"Ma11_g00580","robust_pathway_count":"1","robust_module_count":"1","modules":"RNA and ribosome biogenesis","pathways":"GO:0001522 | pseudouridine synthesis","all_three_pathway_count":"1","GO_annotation":"Biological Process: box H/ACA snoRNA 3'-end processing (GO:0000495);; Molecular Function: RNA binding (GO:0003723);; Molecular Function: pseudouridine synthase activity (GO:0009982);; Biological Process: rRNA pseudouridine synthesis (GO:0031118);; Biological Process: snRNA pseudouridine synthesis (GO:0031120);; Cellular Component: box H/ACA snoRNP complex (GO:0031429);; Biological Process: mRNA pseudouridine synthesis (GO:1990481);; ","Swiss_Prot_annotation":"H/ACA ribonucleoprotein complex subunit 4","NR_annotation":"PREDICTED: H/ACA ribonucleoprotein complex subunit 4-like isoform X1 [Musa acuminata subsp. malaccensis]","recovery_log2fc":"1.20473900013491","recovery_shrunk_log2fc":"0.958272088703502","recovery_padj":"0.0028859184252666","reciprocal_log2fc":"-0.570254554287555","reciprocal_shrunk_log2fc":"-0.536108708505895","reciprocal_padj":"0.032941783122232","exclude_pair_log2fc":"-0.680970172447937","exclude_pair_shrunk_log2fc":"-0.633173440154591","exclude_pair_padj":"0.041805587165312","five_traceable_log2fc":"-0.722497216137308","five_traceable_shrunk_log2fc":"-0.701134615158232","five_traceable_padj":"8.28508337949681e-05","paper_counts_log2fc":"-0.820738891271977","paper_counts_shrunk_log2fc":"-0.794817332277516","paper_counts_padj":"1.0172530128265e-05","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma11_g00580 | 1 | 1 | RNA and ribosome biogenesis | GO:0001522 | pseudouridine synthesis | 1 | Biological Process: box H/ACA snoRNA 3'-end processing (GO:0000495);; Molecular Function: RNA binding (GO:0003723);; Molecular Function: pseudouridine synthase activity (GO:0009982);; Biological Process: rRNA pseudouridine synthesis (GO:0031118);; Biological Process: snRNA pseudouridine synthesis (GO:0031120);; Cellular Component: box H/ACA snoRNP complex (GO:0031429);; Biological Process: mRNA pseudouridine synthesis (GO:1990481);;  | H/ACA ribonucleoprotein complex subunit 4 | PREDICTED: H/ACA ribonucleoprotein complex subunit 4-like isoform X1 [Musa acuminata subsp. malaccensis] | 1.20473900013491 | 0.958272088703502 | 0.0028859184252666 | -0.570254554287555 | -0.536108708505895 | 0.032941783122232 | -0.680970172447937 | -0.633173440154591 | 0.041805587165312 | -0.722497216137308 | -0.701134615158232 | 8.28508337949681e-05 | -0.820738891271977 | -0.794817332277516 | 1.0172530128265e-05 | True | True


record_id: DS057_R00156
dataset_id: DS057
record_json:
{"gene_id":"Ma11_g05390","robust_pathway_count":"1","robust_module_count":"1","modules":"Cell cycle and microtubules","pathways":"GO:0008017 | microtubule binding","all_three_pathway_count":"1","GO_annotation":"--","Swiss_Prot_annotation":"--","NR_annotation":"PREDICTED: protein FAM179B-like [Musa acuminata subsp. malaccensis]","recovery_log2fc":"1.23592158028738","recovery_shrunk_log2fc":"0.622315626906781","recovery_padj":"0.248178317660176","reciprocal_log2fc":"-0.885084336447235","reciprocal_shrunk_log2fc":"-0.841311622131265","reciprocal_padj":"4.99539393251234e-05","exclude_pair_log2fc":"-0.89428283202378","exclude_pair_shrunk_log2fc":"-0.811591484068275","exclude_pair_padj":"0.0169025420778218","five_traceable_log2fc":"-0.84642164086577","five_traceable_shrunk_log2fc":"-0.803812457337611","five_traceable_padj":"0.0005859190886515","paper_counts_log2fc":"-0.852153551663261","paper_counts_shrunk_log2fc":"-0.833244770783751","paper_counts_padj":"2.17394485699462e-08","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma11_g05390 | 1 | 1 | Cell cycle and microtubules | GO:0008017 | microtubule binding | 1 | -- | -- | PREDICTED: protein FAM179B-like [Musa acuminata subsp. malaccensis] | 1.23592158028738 | 0.622315626906781 | 0.248178317660176 | -0.885084336447235 | -0.841311622131265 | 4.99539393251234e-05 | -0.89428283202378 | -0.811591484068275 | 0.0169025420778218 | -0.84642164086577 | -0.803812457337611 | 0.0005859190886515 | -0.852153551663261 | -0.833244770783751 | 2.17394485699462e-08 | True | True


record_id: DS057_R00157
dataset_id: DS057
record_json:
{"gene_id":"Ma11_g05420","robust_pathway_count":"1","robust_module_count":"1","modules":"RNA and ribosome biogenesis","pathways":"GO:0005730 | nucleolus","all_three_pathway_count":"1","GO_annotation":"--","Swiss_Prot_annotation":"--","NR_annotation":"PREDICTED: protein KRI1 homolog [Musa acuminata subsp. malaccensis]","recovery_log2fc":"0.721734302425546","recovery_shrunk_log2fc":"0.262439350639953","recovery_padj":"0.747455519313261","reciprocal_log2fc":"-0.204761146933085","reciprocal_shrunk_log2fc":"-0.196673427064748","reciprocal_padj":"0.428765730618947","exclude_pair_log2fc":"-0.261441690036027","exclude_pair_shrunk_log2fc":"-0.238771170786125","exclude_pair_padj":"0.620881404734153","five_traceable_log2fc":"-0.259684850869858","five_traceable_shrunk_log2fc":"-0.24977046575388","five_traceable_padj":"0.309978712903524","paper_counts_log2fc":"-0.262182253468857","paper_counts_shrunk_log2fc":"-0.253470539158324","paper_counts_padj":"0.238317871954148","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma11_g05420 | 1 | 1 | RNA and ribosome biogenesis | GO:0005730 | nucleolus | 1 | -- | -- | PREDICTED: protein KRI1 homolog [Musa acuminata subsp. malaccensis] | 0.721734302425546 | 0.262439350639953 | 0.747455519313261 | -0.204761146933085 | -0.196673427064748 | 0.428765730618947 | -0.261441690036027 | -0.238771170786125 | 0.620881404734153 | -0.259684850869858 | -0.24977046575388 | 0.309978712903524 | -0.262182253468857 | -0.253470539158324 | 0.238317871954148 | True | True


record_id: DS057_R00158
dataset_id: DS057
record_json:
{"gene_id":"Ma11_g05680","robust_pathway_count":"1","robust_module_count":"1","modules":"Lipid-ethylene metabolism","pathways":"GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","all_three_pathway_count":"1","GO_annotation":"Molecular Function: glycerol-3-phosphate dehydrogenase [NAD+] activity (GO:0004367);; Molecular Function: calcium-transporting ATPase activity (GO:0005388);; Molecular Function: calmodulin binding (GO:0005516);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: cytosol (GO:0005829);; Cellular Component: integral component of plasma membrane (GO:0005887);; Biological Process: carbohydrate metabolic process (GO:0005975);; Cellular Component: glycerol-3-phosphate dehydrogenase complex (GO:0009331);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Biological Process: glycerol-3-phosphate catabolic process (GO:0046168);; Molecular Function: metal ion binding (GO:0046872);; Molecular Function: NAD binding (GO:0051287);; Biological Process: oxidation-reduction process (GO:0055114);; Biological Process: calcium ion transmembrane transport (GO:0070588);; ","Swiss_Prot_annotation":"Probable glycerol-3-phosphate dehydrogenase [NAD(+)] 1, cytosolic","NR_annotation":"PREDICTED: probable glycerol-3-phosphate dehydrogenase [NAD(+)] 1, cytosolic isoform X1 [Musa acuminata subsp. malaccensis]","recovery_log2fc":"-5.60596212875031","recovery_shrunk_log2fc":"-0.291351031604211","recovery_padj":"0.108206812585009","reciprocal_log2fc":"1.65908201970966","reciprocal_shrunk_log2fc":"1.58029763637155","reciprocal_padj":"2.5997663704499e-17","exclude_pair_log2fc":"1.64485612640892","exclude_pair_shrunk_log2fc":"1.49280964771326","exclude_pair_padj":"5.32237709500518e-07","five_traceable_log2fc":"1.65361089206315","five_traceable_shrunk_log2fc":"1.57132743185467","five_traceable_padj":"2.30406921146535e-13","paper_counts_log2fc":"1.67661593221176","paper_counts_shrunk_log2fc":"1.61604143842481","paper_counts_padj":"1.23722544864128e-18","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma11_g05680 | 1 | 1 | Lipid-ethylene metabolism | GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | 1 | Molecular Function: glycerol-3-phosphate dehydrogenase [NAD+] activity (GO:0004367);; Molecular Function: calcium-transporting ATPase activity (GO:0005388);; Molecular Function: calmodulin binding (GO:0005516);; Molecular Function: ATP binding (GO:0005524);; Cellular Component: cytosol (GO:0005829);; Cellular Component: integral component of plasma membrane (GO:0005887);; Biological Process: carbohydrate metabolic process (GO:0005975);; Cellular Component: glycerol-3-phosphate dehydrogenase complex (GO:0009331);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Biological Process: glycerol-3-phosphate catabolic process (GO:0046168);; Molecular Function: metal ion binding (GO:0046872);; Molecular Function: NAD binding (GO:0051287);; Biological Process: oxidation-reduction process (GO:0055114);; Biological Process: calcium ion transmembrane transport (GO:0070588);;  | Probable glycerol-3-phosphate dehydrogenase [NAD(+)] 1, cytosolic | PREDICTED: probable glycerol-3-phosphate dehydrogenase [NAD(+)] 1, cytosolic isoform X1 [Musa acuminata subsp. malaccensis] | -5.60596212875031 | -0.291351031604211 | 0.108206812585009 | 1.65908201970966 | 1.58029763637155 | 2.5997663704499e-17 | 1.64485612640892 | 1.49280964771326 | 5.32237709500518e-07 | 1.65361089206315 | 1.57132743185467 | 2.30406921146535e-13 | 1.67661593221176 | 1.61604143842481 | 1.23722544864128e-18 | True | True


record_id: DS057_R00159
dataset_id: DS057
record_json:
{"gene_id":"Ma11_g09810","robust_pathway_count":"1","robust_module_count":"1","modules":"RNA and ribosome biogenesis","pathways":"GO:0042254 | ribosome biogenesis","all_three_pathway_count":"1","GO_annotation":"--","Swiss_Prot_annotation":"--","NR_annotation":"PREDICTED: box C/D snoRNA protein 1 [Musa acuminata subsp. malaccensis]","recovery_log2fc":"0.704551849663728","recovery_shrunk_log2fc":"0.312484234627745","recovery_padj":"0.69273344322009","reciprocal_log2fc":"-0.4373291444469","reciprocal_shrunk_log2fc":"-0.417320545332453","reciprocal_padj":"0.066713016717468","exclude_pair_log2fc":"-0.496512960949026","exclude_pair_shrunk_log2fc":"-0.452475685278679","exclude_pair_padj":"0.255796306197757","five_traceable_log2fc":"-0.51932663322896","five_traceable_shrunk_log2fc":"-0.499039050700098","five_traceable_padj":"0.0229155296815748","paper_counts_log2fc":"-0.440805206322832","paper_counts_shrunk_log2fc":"-0.432336305753929","paper_counts_padj":"0.003280950117848","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma11_g09810 | 1 | 1 | RNA and ribosome biogenesis | GO:0042254 | ribosome biogenesis | 1 | -- | -- | PREDICTED: box C/D snoRNA protein 1 [Musa acuminata subsp. malaccensis] | 0.704551849663728 | 0.312484234627745 | 0.69273344322009 | -0.4373291444469 | -0.417320545332453 | 0.066713016717468 | -0.496512960949026 | -0.452475685278679 | 0.255796306197757 | -0.51932663322896 | -0.499039050700098 | 0.0229155296815748 | -0.440805206322832 | -0.432336305753929 | 0.003280950117848 | True | True


record_id: DS057_R00160
dataset_id: DS057
record_json:
{"gene_id":"Ma11_g13340","robust_pathway_count":"1","robust_module_count":"1","modules":"RNA and ribosome biogenesis","pathways":"GO:0005730 | nucleolus","all_three_pathway_count":"1","GO_annotation":"Molecular Function: nucleotide binding (GO:0000166);; Molecular Function: nucleic acid binding (GO:0003676);; ","Swiss_Prot_annotation":"Nucleolin 2","NR_annotation":"PREDICTED: nucleolin 2-like isoform X1 [Musa acuminata subsp. malaccensis]","recovery_log2fc":"0.492591986642115","recovery_shrunk_log2fc":"0.395604096991907","recovery_padj":"0.426563037886706","reciprocal_log2fc":"-0.275560035643008","reciprocal_shrunk_log2fc":"-0.266762357310045","reciprocal_padj":"0.191171855221146","exclude_pair_log2fc":"-0.296924743718821","exclude_pair_shrunk_log2fc":"-0.276281726821942","exclude_pair_padj":"0.494177362982559","five_traceable_log2fc":"-0.261691084059266","five_traceable_shrunk_log2fc":"-0.252850739944619","five_traceable_padj":"0.269290420455266","paper_counts_log2fc":"-0.228694568117467","paper_counts_shrunk_log2fc":"-0.224169813247427","paper_counts_padj":"0.170492611990184","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma11_g13340 | 1 | 1 | RNA and ribosome biogenesis | GO:0005730 | nucleolus | 1 | Molecular Function: nucleotide binding (GO:0000166);; Molecular Function: nucleic acid binding (GO:0003676);;  | Nucleolin 2 | PREDICTED: nucleolin 2-like isoform X1 [Musa acuminata subsp. malaccensis] | 0.492591986642115 | 0.395604096991907 | 0.426563037886706 | -0.275560035643008 | -0.266762357310045 | 0.191171855221146 | -0.296924743718821 | -0.276281726821942 | 0.494177362982559 | -0.261691084059266 | -0.252850739944619 | 0.269290420455266 | -0.228694568117467 | -0.224169813247427 | 0.170492611990184 | True | True


record_id: DS057_R00161
dataset_id: DS057
record_json:
{"gene_id":"Ma11_g15660","robust_pathway_count":"1","robust_module_count":"1","modules":"Lipid-ethylene metabolism","pathways":"GO:0006631 | fatty acid metabolic process","all_three_pathway_count":"1","GO_annotation":"Molecular Function: acetyl-CoA C-acyltransferase activity (GO:0003988);; Biological Process: metabolic process (GO:0008152);; ","Swiss_Prot_annotation":"3-ketoacyl-CoA thiolase 2, peroxisomal","NR_annotation":"PREDICTED: 3-ketoacyl-CoA thiolase 2, peroxisomal [Musa acuminata subsp. malaccensis]","recovery_log2fc":"-1.00906901082102","recovery_shrunk_log2fc":"-0.431827005074655","recovery_padj":"0.50516147915625","reciprocal_log2fc":"0.632492705490457","reciprocal_shrunk_log2fc":"0.505900265281484","reciprocal_padj":"0.297268341389276","exclude_pair_log2fc":"1.29244717791279","exclude_pair_shrunk_log2fc":"1.1804300814447","exclude_pair_padj":"8.41687873218548e-05","five_traceable_log2fc":"1.29511270361422","five_traceable_shrunk_log2fc":"1.24236082429242","five_traceable_padj":"3.13627035901562e-10","paper_counts_log2fc":"1.33206073559274","paper_counts_shrunk_log2fc":"1.30672674474908","paper_counts_padj":"1.35709878509335e-22","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma11_g15660 | 1 | 1 | Lipid-ethylene metabolism | GO:0006631 | fatty acid metabolic process | 1 | Molecular Function: acetyl-CoA C-acyltransferase activity (GO:0003988);; Biological Process: metabolic process (GO:0008152);;  | 3-ketoacyl-CoA thiolase 2, peroxisomal | PREDICTED: 3-ketoacyl-CoA thiolase 2, peroxisomal [Musa acuminata subsp. malaccensis] | -1.00906901082102 | -0.431827005074655 | 0.50516147915625 | 0.632492705490457 | 0.505900265281484 | 0.297268341389276 | 1.29244717791279 | 1.1804300814447 | 8.41687873218548e-05 | 1.29511270361422 | 1.24236082429242 | 3.13627035901562e-10 | 1.33206073559274 | 1.30672674474908 | 1.35709878509335e-22 | True | True


record_id: DS057_R00162
dataset_id: DS057
record_json:
{"gene_id":"Ma11_g16190","robust_pathway_count":"1","robust_module_count":"1","modules":"RNA and ribosome biogenesis","pathways":"GO:0001522 | pseudouridine synthesis","all_three_pathway_count":"1","GO_annotation":"Biological Process: box H/ACA snoRNA 3'-end processing (GO:0000495);; Molecular Function: RNA binding (GO:0003723);; Molecular Function: pseudouridine synthase activity (GO:0009982);; Biological Process: rRNA pseudouridine synthesis (GO:0031118);; Biological Process: snRNA pseudouridine synthesis (GO:0031120);; Cellular Component: box H/ACA snoRNP complex (GO:0031429);; Biological Process: mRNA pseudouridine synthesis (GO:1990481);; ","Swiss_Prot_annotation":"H/ACA ribonucleoprotein complex subunit 4","NR_annotation":"PREDICTED: H/ACA ribonucleoprotein complex subunit 4-like [Musa acuminata subsp. malaccensis]","recovery_log2fc":"1.1547569841787","recovery_shrunk_log2fc":"0.886170051510524","recovery_padj":"0.0119611544254275","reciprocal_log2fc":"-0.726674233637608","reciprocal_shrunk_log2fc":"-0.669994647034809","reciprocal_padj":"0.0159600787808072","exclude_pair_log2fc":"-0.886183220793198","exclude_pair_shrunk_log2fc":"-0.814892192564513","exclude_pair_padj":"0.009366426387739","five_traceable_log2fc":"-0.909666082222478","five_traceable_shrunk_log2fc":"-0.875194947476846","five_traceable_padj":"1.01759099605245e-05","paper_counts_log2fc":"-1.04172402119514","paper_counts_shrunk_log2fc":"-0.996682703600943","paper_counts_padj":"1.65256364002433e-06","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma11_g16190 | 1 | 1 | RNA and ribosome biogenesis | GO:0001522 | pseudouridine synthesis | 1 | Biological Process: box H/ACA snoRNA 3'-end processing (GO:0000495);; Molecular Function: RNA binding (GO:0003723);; Molecular Function: pseudouridine synthase activity (GO:0009982);; Biological Process: rRNA pseudouridine synthesis (GO:0031118);; Biological Process: snRNA pseudouridine synthesis (GO:0031120);; Cellular Component: box H/ACA snoRNP complex (GO:0031429);; Biological Process: mRNA pseudouridine synthesis (GO:1990481);;  | H/ACA ribonucleoprotein complex subunit 4 | PREDICTED: H/ACA ribonucleoprotein complex subunit 4-like [Musa acuminata subsp. malaccensis] | 1.1547569841787 | 0.886170051510524 | 0.0119611544254275 | -0.726674233637608 | -0.669994647034809 | 0.0159600787808072 | -0.886183220793198 | -0.814892192564513 | 0.009366426387739 | -0.909666082222478 | -0.875194947476846 | 1.01759099605245e-05 | -1.04172402119514 | -0.996682703600943 | 1.65256364002433e-06 | True | True


record_id: DS057_R00163
dataset_id: DS057
record_json:
{"gene_id":"Ma11_g18510","robust_pathway_count":"1","robust_module_count":"1","modules":"RNA and ribosome biogenesis","pathways":"GO:0006364 | rRNA processing","all_three_pathway_count":"1","GO_annotation":"--","Swiss_Prot_annotation":"--","NR_annotation":"PREDICTED: uncharacterized protein LOC103971923 [Musa acuminata subsp. malaccensis]","recovery_log2fc":"1.25981703132488","recovery_shrunk_log2fc":"0.385421179885494","recovery_padj":"0.528266145776059","reciprocal_log2fc":"-0.242640134153678","reciprocal_shrunk_log2fc":"-0.227541824438137","reciprocal_padj":"0.467983673510969","exclude_pair_log2fc":"-0.319285949582008","exclude_pair_shrunk_log2fc":"-0.29026473016143","exclude_pair_padj":"0.534786181391685","five_traceable_log2fc":"-0.367998029912412","five_traceable_shrunk_log2fc":"-0.351563713379801","five_traceable_padj":"0.164111414114225","paper_counts_log2fc":"-0.226457582140908","paper_counts_shrunk_log2fc":"-0.218159347106417","paper_counts_padj":"0.34739341427058","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma11_g18510 | 1 | 1 | RNA and ribosome biogenesis | GO:0006364 | rRNA processing | 1 | -- | -- | PREDICTED: uncharacterized protein LOC103971923 [Musa acuminata subsp. malaccensis] | 1.25981703132488 | 0.385421179885494 | 0.528266145776059 | -0.242640134153678 | -0.227541824438137 | 0.467983673510969 | -0.319285949582008 | -0.29026473016143 | 0.534786181391685 | -0.367998029912412 | -0.351563713379801 | 0.164111414114225 | -0.226457582140908 | -0.218159347106417 | 0.34739341427058 | True | True


record_id: DS057_R00164
dataset_id: DS057
record_json:
{"gene_id":"Ma11_g21510","robust_pathway_count":"1","robust_module_count":"1","modules":"Cell cycle and microtubules","pathways":"GO:0005874 | microtubule","all_three_pathway_count":"1","GO_annotation":"Molecular Function: GTPase activity (GO:0003924);; Molecular Function: GTP binding (GO:0005525);; ","Swiss_Prot_annotation":"Dynamin-related protein 1E","NR_annotation":"PREDICTED: dynamin-related protein 1E-like [Musa acuminata subsp. malaccensis]","recovery_log2fc":"1.10255539887039","recovery_shrunk_log2fc":"0.269909134306119","recovery_padj":"0.690612275177055","reciprocal_log2fc":"-1.11578954709592","reciprocal_shrunk_log2fc":"-1.00684733697383","reciprocal_padj":"0.0005218878253705","exclude_pair_log2fc":"-1.35494797300325","exclude_pair_shrunk_log2fc":"-1.23247945957577","exclude_pair_padj":"5.13978578202132e-05","five_traceable_log2fc":"-1.32993179769335","five_traceable_shrunk_log2fc":"-1.27537470071794","five_traceable_padj":"1.25700592554347e-10","paper_counts_log2fc":"-1.44805995843256","paper_counts_shrunk_log2fc":"-1.42027178054072","paper_counts_padj":"2.4219143761606002e-26","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma11_g21510 | 1 | 1 | Cell cycle and microtubules | GO:0005874 | microtubule | 1 | Molecular Function: GTPase activity (GO:0003924);; Molecular Function: GTP binding (GO:0005525);;  | Dynamin-related protein 1E | PREDICTED: dynamin-related protein 1E-like [Musa acuminata subsp. malaccensis] | 1.10255539887039 | 0.269909134306119 | 0.690612275177055 | -1.11578954709592 | -1.00684733697383 | 0.0005218878253705 | -1.35494797300325 | -1.23247945957577 | 5.13978578202132e-05 | -1.32993179769335 | -1.27537470071794 | 1.25700592554347e-10 | -1.44805995843256 | -1.42027178054072 | 2.4219143761606002e-26 | True | True


record_id: DS057_R00165
dataset_id: DS057
record_json:
{"gene_id":"Ma11_g24030","robust_pathway_count":"1","robust_module_count":"1","modules":"Cell cycle and microtubules","pathways":"GO:0007017 | microtubule-based process","all_three_pathway_count":"1","GO_annotation":"Molecular Function: GTPase activity (GO:0003924);; Molecular Function: structural constituent of cytoskeleton (GO:0005200);; Molecular Function: GTP binding (GO:0005525);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: microtubule (GO:0005874);; Biological Process: microtubule-based process (GO:0007017);; ","Swiss_Prot_annotation":"Tubulin beta-5 chain","NR_annotation":"PREDICTED: tubulin beta chain-like [Musa acuminata subsp. malaccensis]","recovery_log2fc":"0.372469202608728","recovery_shrunk_log2fc":"0.345716081158768","recovery_padj":"0.198033551274843","reciprocal_log2fc":"-0.352186568215173","reciprocal_shrunk_log2fc":"-0.334315557501473","reciprocal_padj":"0.18922822233637","exclude_pair_log2fc":"-0.288262880983137","exclude_pair_shrunk_log2fc":"-0.262861906493985","exclude_pair_padj":"0.578965972096401","five_traceable_log2fc":"-0.301660337775101","five_traceable_shrunk_log2fc":"-0.286651918202459","five_traceable_padj":"0.303844990000448","paper_counts_log2fc":"-0.17703118938537","paper_counts_shrunk_log2fc":"-0.174263365284427","paper_counts_padj":"0.24186427771282","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma11_g24030 | 1 | 1 | Cell cycle and microtubules | GO:0007017 | microtubule-based process | 1 | Molecular Function: GTPase activity (GO:0003924);; Molecular Function: structural constituent of cytoskeleton (GO:0005200);; Molecular Function: GTP binding (GO:0005525);; Cellular Component: cytoplasm (GO:0005737);; Cellular Component: microtubule (GO:0005874);; Biological Process: microtubule-based process (GO:0007017);;  | Tubulin beta-5 chain | PREDICTED: tubulin beta chain-like [Musa acuminata subsp. malaccensis] | 0.372469202608728 | 0.345716081158768 | 0.198033551274843 | -0.352186568215173 | -0.334315557501473 | 0.18922822233637 | -0.288262880983137 | -0.262861906493985 | 0.578965972096401 | -0.301660337775101 | -0.286651918202459 | 0.303844990000448 | -0.17703118938537 | -0.174263365284427 | 0.24186427771282 | True | True


record_id: DS057_R00166
dataset_id: DS057
record_json:
{"gene_id":"Ma00_g04760","robust_pathway_count":"1","robust_module_count":"1","modules":"RNA and ribosome biogenesis","pathways":"GO:0006353 | DNA-templated transcription termination","all_three_pathway_count":"0","GO_annotation":"Molecular Function: double-stranded DNA binding (GO:0003690);; Cellular Component: mitochondrion (GO:0005739);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; ","Swiss_Prot_annotation":"--","NR_annotation":"PREDICTED: transcription termination factor MTERF9, chloroplastic-like isoform X1 [Musa acuminata subsp. malaccensis] ","recovery_log2fc":"0.807971604237729","recovery_shrunk_log2fc":"0.615084617449363","recovery_padj":"0.149823032892227","reciprocal_log2fc":"-0.425905583202961","reciprocal_shrunk_log2fc":"-0.409019990503464","reciprocal_padj":"0.0519551260371231","exclude_pair_log2fc":"-0.433805908401273","exclude_pair_shrunk_log2fc":"-0.40059585815058","exclude_pair_padj":"0.291513396100163","five_traceable_log2fc":"-0.493408901293613","five_traceable_shrunk_log2fc":"-0.475742240676218","five_traceable_padj":"0.0238860845027923","paper_counts_log2fc":"-0.0989052651590193","paper_counts_shrunk_log2fc":"-0.084847197126249","paper_counts_padj":"0.870173071574533","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma00_g04760 | 1 | 1 | RNA and ribosome biogenesis | GO:0006353 | DNA-templated transcription termination | 0 | Molecular Function: double-stranded DNA binding (GO:0003690);; Cellular Component: mitochondrion (GO:0005739);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);;  | -- | PREDICTED: transcription termination factor MTERF9, chloroplastic-like isoform X1 [Musa acuminata subsp. malaccensis]  | 0.807971604237729 | 0.615084617449363 | 0.149823032892227 | -0.425905583202961 | -0.409019990503464 | 0.0519551260371231 | -0.433805908401273 | -0.40059585815058 | 0.291513396100163 | -0.493408901293613 | -0.475742240676218 | 0.0238860845027923 | -0.0989052651590193 | -0.084847197126249 | 0.870173071574533 | True | True


record_id: DS057_R00167
dataset_id: DS057
record_json:
{"gene_id":"Ma01_g15110","robust_pathway_count":"1","robust_module_count":"1","modules":"RNA and ribosome biogenesis","pathways":"GO:0009086 | methionine biosynthetic process","all_three_pathway_count":"0","GO_annotation":"Molecular Function: catalytic activity (GO:0003824);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: pyridoxal phosphate binding (GO:0030170);; ","Swiss_Prot_annotation":"Cystathionine gamma-synthase 1, chloroplastic","NR_annotation":"PREDICTED: cystathionine gamma-synthase 1, chloroplastic-like [Musa acuminata subsp. malaccensis]","recovery_log2fc":"-1.6711597981618","recovery_shrunk_log2fc":"-1.00340702900329","recovery_padj":"0.0144622494045124","reciprocal_log2fc":"1.07746704158432","reciprocal_shrunk_log2fc":"1.00211313799797","reciprocal_padj":"3.88853683311485e-05","exclude_pair_log2fc":"0.991515812233055","exclude_pair_shrunk_log2fc":"0.887776407606054","exclude_pair_padj":"0.0124859610025076","five_traceable_log2fc":"1.07057011453274","five_traceable_shrunk_log2fc":"0.993882319377883","five_traceable_padj":"0.0002685659315539","paper_counts_log2fc":"1.11422414776518","paper_counts_shrunk_log2fc":"1.06744463499173","paper_counts_padj":"1.60711159529842e-07","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma01_g15110 | 1 | 1 | RNA and ribosome biogenesis | GO:0009086 | methionine biosynthetic process | 0 | Molecular Function: catalytic activity (GO:0003824);; Cellular Component: integral component of membrane (GO:0016021);; Molecular Function: pyridoxal phosphate binding (GO:0030170);;  | Cystathionine gamma-synthase 1, chloroplastic | PREDICTED: cystathionine gamma-synthase 1, chloroplastic-like [Musa acuminata subsp. malaccensis] | -1.6711597981618 | -1.00340702900329 | 0.0144622494045124 | 1.07746704158432 | 1.00211313799797 | 3.88853683311485e-05 | 0.991515812233055 | 0.887776407606054 | 0.0124859610025076 | 1.07057011453274 | 0.993882319377883 | 0.0002685659315539 | 1.11422414776518 | 1.06744463499173 | 1.60711159529842e-07 | True | True


record_id: DS057_R00168
dataset_id: DS057
record_json:
{"gene_id":"Ma02_g05810","robust_pathway_count":"1","robust_module_count":"1","modules":"RNA and ribosome biogenesis","pathways":"GO:0006950 | response to stress","all_three_pathway_count":"0","GO_annotation":"Molecular Function: magnesium ion binding (GO:0000287);; Molecular Function: pyruvate kinase activity (GO:0004743);; Biological Process: glycolytic process (GO:0006096);; Molecular Function: kinase activity (GO:0016301);; Molecular Function: potassium ion binding (GO:0030955);; ","Swiss_Prot_annotation":"Pyruvate kinase, cytosolic isozyme","NR_annotation":"PREDICTED: pyruvate kinase, cytosolic isozyme-like [Musa acuminata subsp. malaccensis] ","recovery_log2fc":"-0.514455779263883","recovery_shrunk_log2fc":"-0.352083906202553","recovery_padj":"0.596741810989772","reciprocal_log2fc":"0.842240933333563","reciprocal_shrunk_log2fc":"0.703485561367922","reciprocal_padj":"0.0855707561963475","exclude_pair_log2fc":"1.26028116175692","exclude_pair_shrunk_log2fc":"1.13321765155257","exclude_pair_padj":"0.0005638236923387","five_traceable_log2fc":"1.33599267201415","five_traceable_shrunk_log2fc":"1.24550661259437","five_traceable_padj":"1.29969350306311e-06","paper_counts_log2fc":"1.33304616917219","paper_counts_shrunk_log2fc":"1.2762951262466","paper_counts_padj":"2.84674579292964e-10","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma02_g05810 | 1 | 1 | RNA and ribosome biogenesis | GO:0006950 | response to stress | 0 | Molecular Function: magnesium ion binding (GO:0000287);; Molecular Function: pyruvate kinase activity (GO:0004743);; Biological Process: glycolytic process (GO:0006096);; Molecular Function: kinase activity (GO:0016301);; Molecular Function: potassium ion binding (GO:0030955);;  | Pyruvate kinase, cytosolic isozyme | PREDICTED: pyruvate kinase, cytosolic isozyme-like [Musa acuminata subsp. malaccensis]  | -0.514455779263883 | -0.352083906202553 | 0.596741810989772 | 0.842240933333563 | 0.703485561367922 | 0.0855707561963475 | 1.26028116175692 | 1.13321765155257 | 0.0005638236923387 | 1.33599267201415 | 1.24550661259437 | 1.29969350306311e-06 | 1.33304616917219 | 1.2762951262466 | 2.84674579292964e-10 | True | True


record_id: DS057_R00169
dataset_id: DS057
record_json:
{"gene_id":"Ma02_g18500","robust_pathway_count":"1","robust_module_count":"1","modules":"RNA and ribosome biogenesis","pathways":"GO:0006950 | response to stress","all_three_pathway_count":"0","GO_annotation":"--","Swiss_Prot_annotation":"Serine/threonine-protein kinase EDR1","NR_annotation":"PREDICTED: serine/threonine-protein kinase EDR1 isoform X1 [Musa acuminata subsp. malaccensis]","recovery_log2fc":"-0.592956520701739","recovery_shrunk_log2fc":"-0.3641656879106","recovery_padj":"0.603256849972964","reciprocal_log2fc":"0.593277653079228","reciprocal_shrunk_log2fc":"0.545408636575818","reciprocal_padj":"0.0658139890266005","exclude_pair_log2fc":"0.651609620912352","exclude_pair_shrunk_log2fc":"0.570603047892292","exclude_pair_padj":"0.203488935726811","five_traceable_log2fc":"0.721109250055187","five_traceable_shrunk_log2fc":"0.669779809828817","five_traceable_padj":"0.0208602496931309","paper_counts_log2fc":"0.770814846038441","paper_counts_shrunk_log2fc":"0.744642916962281","paper_counts_padj":"7.71024495415386e-05","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma02_g18500 | 1 | 1 | RNA and ribosome biogenesis | GO:0006950 | response to stress | 0 | -- | Serine/threonine-protein kinase EDR1 | PREDICTED: serine/threonine-protein kinase EDR1 isoform X1 [Musa acuminata subsp. malaccensis] | -0.592956520701739 | -0.3641656879106 | 0.603256849972964 | 0.593277653079228 | 0.545408636575818 | 0.0658139890266005 | 0.651609620912352 | 0.570603047892292 | 0.203488935726811 | 0.721109250055187 | 0.669779809828817 | 0.0208602496931309 | 0.770814846038441 | 0.744642916962281 | 7.71024495415386e-05 | True | True


record_id: DS057_R00170
dataset_id: DS057
record_json:
{"gene_id":"Ma03_g07140","robust_pathway_count":"1","robust_module_count":"1","modules":"RNA and ribosome biogenesis","pathways":"GO:0043169 | cation binding","all_three_pathway_count":"0","GO_annotation":"Molecular Function: alpha-amylase activity (GO:0004556);; Molecular Function: calcium ion binding (GO:0005509);; Biological Process: starch catabolic process (GO:0005983);; Biological Process: sucrose catabolic process (GO:0005987);; ","Swiss_Prot_annotation":"Alpha-amylase isozyme 3C","NR_annotation":"PREDICTED: alpha-amylase isozyme 3C-like [Musa acuminata subsp. malaccensis]","recovery_log2fc":"-1.49566887287367","recovery_shrunk_log2fc":"-0.583252657436248","recovery_padj":"0.276753766546205","reciprocal_log2fc":"2.99521972952567","reciprocal_shrunk_log2fc":"2.26938807061408","reciprocal_padj":"6.44527583211054e-09","exclude_pair_log2fc":"3.10561127643134","exclude_pair_shrunk_log2fc":"2.04832061238972","exclude_pair_padj":"3.97325028943014e-05","five_traceable_log2fc":"2.99965866906017","five_traceable_shrunk_log2fc":"2.25283145381477","five_traceable_padj":"2.7110276130959e-07","paper_counts_log2fc":"2.79997705423528","paper_counts_shrunk_log2fc":"2.1819412392149","paper_counts_padj":"2.34647617409378e-07","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma03_g07140 | 1 | 1 | RNA and ribosome biogenesis | GO:0043169 | cation binding | 0 | Molecular Function: alpha-amylase activity (GO:0004556);; Molecular Function: calcium ion binding (GO:0005509);; Biological Process: starch catabolic process (GO:0005983);; Biological Process: sucrose catabolic process (GO:0005987);;  | Alpha-amylase isozyme 3C | PREDICTED: alpha-amylase isozyme 3C-like [Musa acuminata subsp. malaccensis] | -1.49566887287367 | -0.583252657436248 | 0.276753766546205 | 2.99521972952567 | 2.26938807061408 | 6.44527583211054e-09 | 3.10561127643134 | 2.04832061238972 | 3.97325028943014e-05 | 2.99965866906017 | 2.25283145381477 | 2.7110276130959e-07 | 2.79997705423528 | 2.1819412392149 | 2.34647617409378e-07 | True | True


record_id: DS057_R00171
dataset_id: DS057
record_json:
{"gene_id":"Ma03_g09880","robust_pathway_count":"1","robust_module_count":"1","modules":"RNA and ribosome biogenesis","pathways":"GO:0006950 | response to stress","all_three_pathway_count":"0","GO_annotation":"Molecular Function: magnesium ion binding (GO:0000287);; Molecular Function: carboxy-lyase activity (GO:0016831);; Molecular Function: thiamine pyrophosphate binding (GO:0030976);; ","Swiss_Prot_annotation":"Pyruvate decarboxylase 2","NR_annotation":"PREDICTED: pyruvate decarboxylase 1 [Musa acuminata subsp. malaccensis]","recovery_log2fc":"-0.743014228605952","recovery_shrunk_log2fc":"-0.385969080916162","recovery_padj":"0.583066956261612","reciprocal_log2fc":"0.791914350488702","reciprocal_shrunk_log2fc":"0.72469609765911","reciprocal_padj":"0.0114902457097112","exclude_pair_log2fc":"0.934360445049352","exclude_pair_shrunk_log2fc":"0.823127284842969","exclude_pair_padj":"0.0353445078150931","five_traceable_log2fc":"0.878950048837856","five_traceable_shrunk_log2fc":"0.807686993427609","five_traceable_padj":"0.0071888936009163","paper_counts_log2fc":"0.870354597471031","paper_counts_shrunk_log2fc":"0.842520327767526","paper_counts_padj":"2.9628248718909e-06","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma03_g09880 | 1 | 1 | RNA and ribosome biogenesis | GO:0006950 | response to stress | 0 | Molecular Function: magnesium ion binding (GO:0000287);; Molecular Function: carboxy-lyase activity (GO:0016831);; Molecular Function: thiamine pyrophosphate binding (GO:0030976);;  | Pyruvate decarboxylase 2 | PREDICTED: pyruvate decarboxylase 1 [Musa acuminata subsp. malaccensis] | -0.743014228605952 | -0.385969080916162 | 0.583066956261612 | 0.791914350488702 | 0.72469609765911 | 0.0114902457097112 | 0.934360445049352 | 0.823127284842969 | 0.0353445078150931 | 0.878950048837856 | 0.807686993427609 | 0.0071888936009163 | 0.870354597471031 | 0.842520327767526 | 2.9628248718909e-06 | True | True


record_id: DS057_R00172
dataset_id: DS057
record_json:
{"gene_id":"Ma03_g10940","robust_pathway_count":"1","robust_module_count":"1","modules":"RNA and ribosome biogenesis","pathways":"GO:0006353 | DNA-templated transcription termination","all_three_pathway_count":"0","GO_annotation":"--","Swiss_Prot_annotation":"Transcription termination factor MTEF18, mitochondrial","NR_annotation":"PREDICTED: transcription termination factor MTEF18, mitochondrial-like [Musa acuminata subsp. malaccensis]","recovery_log2fc":"0.36411955590154","recovery_shrunk_log2fc":"0.262553000877361","recovery_padj":"0.72612212686815","reciprocal_log2fc":"-0.335040707334448","reciprocal_shrunk_log2fc":"-0.315910465728196","reciprocal_padj":"0.253750573772759","exclude_pair_log2fc":"-0.443814378737686","exclude_pair_shrunk_log2fc":"-0.401712685368433","exclude_pair_padj":"0.352667030819394","five_traceable_log2fc":"-0.423784220579614","five_traceable_shrunk_log2fc":"-0.402424307517287","five_traceable_padj":"0.126885428293841","paper_counts_log2fc":"-0.386134435214796","paper_counts_shrunk_log2fc":"-0.37938268164647","paper_counts_padj":"0.0074830021040176","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma03_g10940 | 1 | 1 | RNA and ribosome biogenesis | GO:0006353 | DNA-templated transcription termination | 0 | -- | Transcription termination factor MTEF18, mitochondrial | PREDICTED: transcription termination factor MTEF18, mitochondrial-like [Musa acuminata subsp. malaccensis] | 0.36411955590154 | 0.262553000877361 | 0.72612212686815 | -0.335040707334448 | -0.315910465728196 | 0.253750573772759 | -0.443814378737686 | -0.401712685368433 | 0.352667030819394 | -0.423784220579614 | -0.402424307517287 | 0.126885428293841 | -0.386134435214796 | -0.37938268164647 | 0.0074830021040176 | True | True


record_id: DS057_R00173
dataset_id: DS057
record_json:
{"gene_id":"Ma04_g01840","robust_pathway_count":"1","robust_module_count":"1","modules":"RNA and ribosome biogenesis","pathways":"GO:0006353 | DNA-templated transcription termination","all_three_pathway_count":"0","GO_annotation":"Molecular Function: double-stranded DNA binding (GO:0003690);; Cellular Component: mitochondrion (GO:0005739);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; ","Swiss_Prot_annotation":"Transcription termination factor MTERF15, mitochondrial","NR_annotation":"PREDICTED: transcription termination factor MTERF15, mitochondrial-like isoform X2 [Musa acuminata subsp. malaccensis]","recovery_log2fc":"0.514488843209985","recovery_shrunk_log2fc":"0.27401616778955","recovery_padj":"0.747300643758481","reciprocal_log2fc":"-0.717575247340018","reciprocal_shrunk_log2fc":"-0.632552347211287","reciprocal_padj":"0.0736777393415739","exclude_pair_log2fc":"-1.04245300307321","exclude_pair_shrunk_log2fc":"-0.88670464842088","exclude_pair_padj":"0.040861653290868","five_traceable_log2fc":"-0.852252871612343","five_traceable_shrunk_log2fc":"-0.763302234622012","five_traceable_padj":"0.0286258796680261","paper_counts_log2fc":"-0.508307135811271","paper_counts_shrunk_log2fc":"-0.418486691745347","paper_counts_padj":"0.379185836232451","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma04_g01840 | 1 | 1 | RNA and ribosome biogenesis | GO:0006353 | DNA-templated transcription termination | 0 | Molecular Function: double-stranded DNA binding (GO:0003690);; Cellular Component: mitochondrion (GO:0005739);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);;  | Transcription termination factor MTERF15, mitochondrial | PREDICTED: transcription termination factor MTERF15, mitochondrial-like isoform X2 [Musa acuminata subsp. malaccensis] | 0.514488843209985 | 0.27401616778955 | 0.747300643758481 | -0.717575247340018 | -0.632552347211287 | 0.0736777393415739 | -1.04245300307321 | -0.88670464842088 | 0.040861653290868 | -0.852252871612343 | -0.763302234622012 | 0.0286258796680261 | -0.508307135811271 | -0.418486691745347 | 0.379185836232451 | True | True


record_id: DS057_R00174
dataset_id: DS057
record_json:
{"gene_id":"Ma04_g02110","robust_pathway_count":"1","robust_module_count":"1","modules":"RNA and ribosome biogenesis","pathways":"GO:0006353 | DNA-templated transcription termination","all_three_pathway_count":"0","GO_annotation":"Molecular Function: double-stranded DNA binding (GO:0003690);; Cellular Component: mitochondrion (GO:0005739);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; ","Swiss_Prot_annotation":"Transcription termination factor MTERF8, chloroplastic","NR_annotation":"PREDICTED: transcription termination factor MTERF8, chloroplastic-like [Musa acuminata subsp. malaccensis] ","recovery_log2fc":"0.656277361292132","recovery_shrunk_log2fc":"0.397010961737516","recovery_padj":"0.552876751514146","reciprocal_log2fc":"-0.588220051275306","reciprocal_shrunk_log2fc":"-0.542466227774407","reciprocal_padj":"0.0620565103677608","exclude_pair_log2fc":"-0.777267583322423","exclude_pair_shrunk_log2fc":"-0.696828742200188","exclude_pair_padj":"0.0656661998585061","five_traceable_log2fc":"-0.710201645399821","five_traceable_shrunk_log2fc":"-0.664160766827483","five_traceable_padj":"0.0164322162286852","paper_counts_log2fc":"0.519244842558804","paper_counts_shrunk_log2fc":"0.450587480540042","paper_counts_padj":"0.271750767627291","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma04_g02110 | 1 | 1 | RNA and ribosome biogenesis | GO:0006353 | DNA-templated transcription termination | 0 | Molecular Function: double-stranded DNA binding (GO:0003690);; Cellular Component: mitochondrion (GO:0005739);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);;  | Transcription termination factor MTERF8, chloroplastic | PREDICTED: transcription termination factor MTERF8, chloroplastic-like [Musa acuminata subsp. malaccensis]  | 0.656277361292132 | 0.397010961737516 | 0.552876751514146 | -0.588220051275306 | -0.542466227774407 | 0.0620565103677608 | -0.777267583322423 | -0.696828742200188 | 0.0656661998585061 | -0.710201645399821 | -0.664160766827483 | 0.0164322162286852 | 0.519244842558804 | 0.450587480540042 | 0.271750767627291 | True | True


record_id: DS057_R00175
dataset_id: DS057
record_json:
{"gene_id":"Ma04_g02120","robust_pathway_count":"1","robust_module_count":"1","modules":"RNA and ribosome biogenesis","pathways":"GO:0006353 | DNA-templated transcription termination","all_three_pathway_count":"0","GO_annotation":"Molecular Function: double-stranded DNA binding (GO:0003690);; Cellular Component: mitochondrion (GO:0005739);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);; ","Swiss_Prot_annotation":"Transcription termination factor MTERF4, chloroplastic","NR_annotation":"PREDICTED: transcription termination factor MTERF15, mitochondrial-like [Musa acuminata subsp. malaccensis]","recovery_log2fc":"0.81357434937418","recovery_shrunk_log2fc":"0.527665079994949","recovery_padj":"0.346090705855293","reciprocal_log2fc":"-0.380391488477162","reciprocal_shrunk_log2fc":"-0.356861386285339","reciprocal_padj":"0.204087973281589","exclude_pair_log2fc":"-0.5565707938827","exclude_pair_shrunk_log2fc":"-0.502730853501395","exclude_pair_padj":"0.213551818930775","five_traceable_log2fc":"-0.488231281366667","five_traceable_shrunk_log2fc":"-0.463659350644731","five_traceable_padj":"0.0707160547008433","paper_counts_log2fc":"-0.529294254541254","paper_counts_shrunk_log2fc":"-0.500082167683051","paper_counts_padj":"0.0515521777334502","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma04_g02120 | 1 | 1 | RNA and ribosome biogenesis | GO:0006353 | DNA-templated transcription termination | 0 | Molecular Function: double-stranded DNA binding (GO:0003690);; Cellular Component: mitochondrion (GO:0005739);; Biological Process: regulation of transcription, DNA-templated (GO:0006355);;  | Transcription termination factor MTERF4, chloroplastic | PREDICTED: transcription termination factor MTERF15, mitochondrial-like [Musa acuminata subsp. malaccensis] | 0.81357434937418 | 0.527665079994949 | 0.346090705855293 | -0.380391488477162 | -0.356861386285339 | 0.204087973281589 | -0.5565707938827 | -0.502730853501395 | 0.213551818930775 | -0.488231281366667 | -0.463659350644731 | 0.0707160547008433 | -0.529294254541254 | -0.500082167683051 | 0.0515521777334502 | True | True


record_id: DS057_R00176
dataset_id: DS057
record_json:
{"gene_id":"Ma04_g02310","robust_pathway_count":"1","robust_module_count":"1","modules":"RNA and ribosome biogenesis","pathways":"GO:0006950 | response to stress","all_three_pathway_count":"0","GO_annotation":"--","Swiss_Prot_annotation":"--","NR_annotation":"PREDICTED: uncharacterized protein LOC103980267 [Musa acuminata subsp. malaccensis]","recovery_log2fc":"-0.71318505728535","recovery_shrunk_log2fc":"-0.449128816749029","recovery_padj":"0.470362874209993","reciprocal_log2fc":"0.699738084816569","reciprocal_shrunk_log2fc":"0.599489660846435","reciprocal_padj":"0.130248568671012","exclude_pair_log2fc":"1.17051513775992","exclude_pair_shrunk_log2fc":"1.05272986987102","exclude_pair_padj":"0.0016037438909809","five_traceable_log2fc":"1.12540143967968","five_traceable_shrunk_log2fc":"1.05774205591878","five_traceable_padj":"1.82683678547258e-05","paper_counts_log2fc":"1.36274121126421","paper_counts_shrunk_log2fc":"1.3340980257884","paper_counts_padj":"2.15156127927426e-21","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma04_g02310 | 1 | 1 | RNA and ribosome biogenesis | GO:0006950 | response to stress | 0 | -- | -- | PREDICTED: uncharacterized protein LOC103980267 [Musa acuminata subsp. malaccensis] | -0.71318505728535 | -0.449128816749029 | 0.470362874209993 | 0.699738084816569 | 0.599489660846435 | 0.130248568671012 | 1.17051513775992 | 1.05272986987102 | 0.0016037438909809 | 1.12540143967968 | 1.05774205591878 | 1.82683678547258e-05 | 1.36274121126421 | 1.3340980257884 | 2.15156127927426e-21 | True | True


record_id: DS057_R00177
dataset_id: DS057
record_json:
{"gene_id":"Ma04_g21170","robust_pathway_count":"1","robust_module_count":"1","modules":"RNA and ribosome biogenesis","pathways":"GO:0006950 | response to stress","all_three_pathway_count":"0","GO_annotation":"--","Swiss_Prot_annotation":"Ethylene-responsive transcription factor ERF105","NR_annotation":"PREDICTED: ethylene-responsive transcription factor ERF105-like [Musa acuminata subsp. malaccensis]","recovery_log2fc":"-4.13198319427563","recovery_shrunk_log2fc":"-0.137944947099048","recovery_padj":"","reciprocal_log2fc":"1.2978109165797","reciprocal_shrunk_log2fc":"0.774009752647017","reciprocal_padj":"0.168347432416193","exclude_pair_log2fc":"0.802227911247901","exclude_pair_shrunk_log2fc":"0.571613792177954","exclude_pair_padj":"0.404154726086844","five_traceable_log2fc":"0.805339300292592","five_traceable_shrunk_log2fc":"0.672213342793994","five_traceable_padj":"0.132559860182729","paper_counts_log2fc":"0.79155159042555","paper_counts_shrunk_log2fc":"0.681119045109824","paper_counts_padj":"0.0850521408661224","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma04_g21170 | 1 | 1 | RNA and ribosome biogenesis | GO:0006950 | response to stress | 0 | -- | Ethylene-responsive transcription factor ERF105 | PREDICTED: ethylene-responsive transcription factor ERF105-like [Musa acuminata subsp. malaccensis] | -4.13198319427563 | -0.137944947099048 | 1.2978109165797 | 0.774009752647017 | 0.168347432416193 | 0.802227911247901 | 0.571613792177954 | 0.404154726086844 | 0.805339300292592 | 0.672213342793994 | 0.132559860182729 | 0.79155159042555 | 0.681119045109824 | 0.0850521408661224 | True | True


record_id: DS057_R00178
dataset_id: DS057
record_json:
{"gene_id":"Ma04_g32520","robust_pathway_count":"1","robust_module_count":"1","modules":"RNA and ribosome biogenesis","pathways":"GO:0006950 | response to stress","all_three_pathway_count":"0","GO_annotation":"Molecular Function: nucleotide binding (GO:0000166);; Molecular Function: protein kinase activity (GO:0004672);; Cellular Component: membrane (GO:0016020);; Biological Process: phosphorylation (GO:0016310);; ","Swiss_Prot_annotation":"Phytosulfokine receptor 1","NR_annotation":"PREDICTED: phytosulfokine receptor 1-like [Musa acuminata subsp. malaccensis]","recovery_log2fc":"-4.79185094471096","recovery_shrunk_log2fc":"-0.150793127651003","recovery_padj":"","reciprocal_log2fc":"1.39857477028249","reciprocal_shrunk_log2fc":"1.11751409580798","reciprocal_padj":"0.005920507338812","exclude_pair_log2fc":"1.45112401225219","exclude_pair_shrunk_log2fc":"1.02407857183633","exclude_pair_padj":"0.070798123492104","five_traceable_log2fc":"1.4287432945773","five_traceable_shrunk_log2fc":"1.1343524918839","five_traceable_padj":"0.0109298650335669","paper_counts_log2fc":"1.55161126275004","paper_counts_shrunk_log2fc":"1.30147884272256","paper_counts_padj":"0.0007848400217552","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma04_g32520 | 1 | 1 | RNA and ribosome biogenesis | GO:0006950 | response to stress | 0 | Molecular Function: nucleotide binding (GO:0000166);; Molecular Function: protein kinase activity (GO:0004672);; Cellular Component: membrane (GO:0016020);; Biological Process: phosphorylation (GO:0016310);;  | Phytosulfokine receptor 1 | PREDICTED: phytosulfokine receptor 1-like [Musa acuminata subsp. malaccensis] | -4.79185094471096 | -0.150793127651003 | 1.39857477028249 | 1.11751409580798 | 0.005920507338812 | 1.45112401225219 | 1.02407857183633 | 0.070798123492104 | 1.4287432945773 | 1.1343524918839 | 0.0109298650335669 | 1.55161126275004 | 1.30147884272256 | 0.0007848400217552 | True | True


record_id: DS057_R00179
dataset_id: DS057
record_json:
{"gene_id":"Ma05_g08040","robust_pathway_count":"1","robust_module_count":"1","modules":"RNA and ribosome biogenesis","pathways":"GO:0043169 | cation binding","all_three_pathway_count":"0","GO_annotation":"Molecular Function: alpha-amylase activity (GO:0004556);; Molecular Function: calcium ion binding (GO:0005509);; Biological Process: starch catabolic process (GO:0005983);; Biological Process: sucrose catabolic process (GO:0005987);; ","Swiss_Prot_annotation":"Alpha-amylase isozyme 3C","NR_annotation":"PREDICTED: alpha-amylase isozyme 3C-like [Musa acuminata subsp. malaccensis]","recovery_log2fc":"-0.926632838959655","recovery_shrunk_log2fc":"-0.48742560986814","recovery_padj":"0.43715622364283","reciprocal_log2fc":"2.31285655323893","reciprocal_shrunk_log2fc":"2.05701225535368","reciprocal_padj":"1.43665686399679e-13","exclude_pair_log2fc":"2.03566581225896","exclude_pair_shrunk_log2fc":"1.72770798189445","exclude_pair_padj":"3.42460058982686e-06","five_traceable_log2fc":"2.12479155679211","five_traceable_shrunk_log2fc":"1.94475239065796","five_traceable_padj":"1.5549249274945998e-12","paper_counts_log2fc":"1.37661669143173","paper_counts_shrunk_log2fc":"1.22331159779274","paper_counts_padj":"0.0002004263403508","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma05_g08040 | 1 | 1 | RNA and ribosome biogenesis | GO:0043169 | cation binding | 0 | Molecular Function: alpha-amylase activity (GO:0004556);; Molecular Function: calcium ion binding (GO:0005509);; Biological Process: starch catabolic process (GO:0005983);; Biological Process: sucrose catabolic process (GO:0005987);;  | Alpha-amylase isozyme 3C | PREDICTED: alpha-amylase isozyme 3C-like [Musa acuminata subsp. malaccensis] | -0.926632838959655 | -0.48742560986814 | 0.43715622364283 | 2.31285655323893 | 2.05701225535368 | 1.43665686399679e-13 | 2.03566581225896 | 1.72770798189445 | 3.42460058982686e-06 | 2.12479155679211 | 1.94475239065796 | 1.5549249274945998e-12 | 1.37661669143173 | 1.22331159779274 | 0.0002004263403508 | True | True


record_id: DS057_R00180
dataset_id: DS057
record_json:
{"gene_id":"Ma05_g10310","robust_pathway_count":"1","robust_module_count":"1","modules":"RNA and ribosome biogenesis","pathways":"GO:0043169 | cation binding","all_three_pathway_count":"0","GO_annotation":"Molecular Function: alpha-amylase activity (GO:0004556);; Molecular Function: calcium ion binding (GO:0005509);; Biological Process: starch catabolic process (GO:0005983);; Biological Process: sucrose catabolic process (GO:0005987);; ","Swiss_Prot_annotation":"Alpha-amylase isozyme 3A","NR_annotation":"PREDICTED: alpha-amylase isozyme 3C-like [Musa acuminata subsp. malaccensis]","recovery_log2fc":"-2.55586562571006","recovery_shrunk_log2fc":"-0.462915374603464","recovery_padj":"0.220821456621896","reciprocal_log2fc":"3.50269279344364","reciprocal_shrunk_log2fc":"3.14591966290527","reciprocal_padj":"1.03874166586167e-33","exclude_pair_log2fc":"3.74175639904796","exclude_pair_shrunk_log2fc":"3.16887661431938","exclude_pair_padj":"1.04890104593331e-19","five_traceable_log2fc":"3.68970270679065","five_traceable_shrunk_log2fc":"3.35371256438558","five_traceable_padj":"8.16146221911408e-34","paper_counts_log2fc":"3.18523362870107","paper_counts_shrunk_log2fc":"2.93455926625484","paper_counts_padj":"3.97937368166696e-29","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma05_g10310 | 1 | 1 | RNA and ribosome biogenesis | GO:0043169 | cation binding | 0 | Molecular Function: alpha-amylase activity (GO:0004556);; Molecular Function: calcium ion binding (GO:0005509);; Biological Process: starch catabolic process (GO:0005983);; Biological Process: sucrose catabolic process (GO:0005987);;  | Alpha-amylase isozyme 3A | PREDICTED: alpha-amylase isozyme 3C-like [Musa acuminata subsp. malaccensis] | -2.55586562571006 | -0.462915374603464 | 0.220821456621896 | 3.50269279344364 | 3.14591966290527 | 1.03874166586167e-33 | 3.74175639904796 | 3.16887661431938 | 1.04890104593331e-19 | 3.68970270679065 | 3.35371256438558 | 8.16146221911408e-34 | 3.18523362870107 | 2.93455926625484 | 3.97937368166696e-29 | True | True


record_id: DS057_R00181
dataset_id: DS057
record_json:
{"gene_id":"Ma05_g22740","robust_pathway_count":"1","robust_module_count":"1","modules":"RNA and ribosome biogenesis","pathways":"GO:0006950 | response to stress","all_three_pathway_count":"0","GO_annotation":"Molecular Function: peroxidase activity (GO:0004601);; Cellular Component: extracellular region (GO:0005576);; Biological Process: response to oxidative stress (GO:0006979);; Molecular Function: heme binding (GO:0020037);; Biological Process: hydrogen peroxide catabolic process (GO:0042744);; Molecular Function: metal ion binding (GO:0046872);; Biological Process: oxidation-reduction process (GO:0055114);; Biological Process: cellular oxidant detoxification (GO:0098869);; ","Swiss_Prot_annotation":"Peroxidase 5","NR_annotation":"PREDICTED: peroxidase 5-like [Musa acuminata subsp. malaccensis]","recovery_log2fc":"-3.35657841791093","recovery_shrunk_log2fc":"-0.457788944307265","recovery_padj":"0.151876448714955","reciprocal_log2fc":"3.11874267405015","reciprocal_shrunk_log2fc":"1.31825412938253","reciprocal_padj":"0.0090550748409875","exclude_pair_log2fc":"3.27361761546232","exclude_pair_shrunk_log2fc":"0.928361177147161","exclude_pair_padj":"0.092505461012871","five_traceable_log2fc":"3.18467354229615","five_traceable_shrunk_log2fc":"1.29895743348725","five_traceable_padj":"0.0174030825062872","paper_counts_log2fc":"2.95160687416279","paper_counts_shrunk_log2fc":"1.38123336395503","paper_counts_padj":"0.0088979056494882","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma05_g22740 | 1 | 1 | RNA and ribosome biogenesis | GO:0006950 | response to stress | 0 | Molecular Function: peroxidase activity (GO:0004601);; Cellular Component: extracellular region (GO:0005576);; Biological Process: response to oxidative stress (GO:0006979);; Molecular Function: heme binding (GO:0020037);; Biological Process: hydrogen peroxide catabolic process (GO:0042744);; Molecular Function: metal ion binding (GO:0046872);; Biological Process: oxidation-reduction process (GO:0055114);; Biological Process: cellular oxidant detoxification (GO:0098869);;  | Peroxidase 5 | PREDICTED: peroxidase 5-like [Musa acuminata subsp. malaccensis] | -3.35657841791093 | -0.457788944307265 | 0.151876448714955 | 3.11874267405015 | 1.31825412938253 | 0.0090550748409875 | 3.27361761546232 | 0.928361177147161 | 0.092505461012871 | 3.18467354229615 | 1.29895743348725 | 0.0174030825062872 | 2.95160687416279 | 1.38123336395503 | 0.0088979056494882 | True | True


record_id: DS057_R00182
dataset_id: DS057
record_json:
{"gene_id":"Ma05_g24080","robust_pathway_count":"1","robust_module_count":"1","modules":"RNA and ribosome biogenesis","pathways":"GO:0043169 | cation binding","all_three_pathway_count":"0","GO_annotation":"Molecular Function: protein serine/threonine phosphatase activity (GO:0004722);; Biological Process: protein dephosphorylation (GO:0006470);; Molecular Function: metal ion binding (GO:0046872);; ","Swiss_Prot_annotation":"Probable protein phosphatase 2C 35","NR_annotation":"PREDICTED: probable protein phosphatase 2C 35 [Musa acuminata subsp. malaccensis]","recovery_log2fc":"-2.9241448902592","recovery_shrunk_log2fc":"-0.264146639933077","recovery_padj":"","reciprocal_log2fc":"1.68308459080427","reciprocal_shrunk_log2fc":"1.57997468633931","reciprocal_padj":"1.12600610002596e-13","exclude_pair_log2fc":"1.50166862247142","exclude_pair_shrunk_log2fc":"1.36679270156289","exclude_pair_padj":"4.38787138396077e-06","five_traceable_log2fc":"1.54644438114787","five_traceable_shrunk_log2fc":"1.48170535615322","five_traceable_padj":"5.81793846264019e-14","paper_counts_log2fc":"1.54495388328131","paper_counts_shrunk_log2fc":"1.50901002178449","paper_counts_padj":"1.12520198744558e-24","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma05_g24080 | 1 | 1 | RNA and ribosome biogenesis | GO:0043169 | cation binding | 0 | Molecular Function: protein serine/threonine phosphatase activity (GO:0004722);; Biological Process: protein dephosphorylation (GO:0006470);; Molecular Function: metal ion binding (GO:0046872);;  | Probable protein phosphatase 2C 35 | PREDICTED: probable protein phosphatase 2C 35 [Musa acuminata subsp. malaccensis] | -2.9241448902592 | -0.264146639933077 | 1.68308459080427 | 1.57997468633931 | 1.12600610002596e-13 | 1.50166862247142 | 1.36679270156289 | 4.38787138396077e-06 | 1.54644438114787 | 1.48170535615322 | 5.81793846264019e-14 | 1.54495388328131 | 1.50901002178449 | 1.12520198744558e-24 | True | True


record_id: DS057_R00183
dataset_id: DS057
record_json:
{"gene_id":"Ma05_g26900","robust_pathway_count":"1","robust_module_count":"1","modules":"RNA and ribosome biogenesis","pathways":"GO:0006950 | response to stress","all_three_pathway_count":"0","GO_annotation":"Cellular Component: endoplasmic reticulum membrane (GO:0005789);; Cellular Component: integral component of membrane (GO:0016021);; ","Swiss_Prot_annotation":"Derlin-2.2","NR_annotation":"PREDICTED: derlin-2.2 [Musa acuminata subsp. malaccensis]","recovery_log2fc":"-0.370276228874205","recovery_shrunk_log2fc":"-0.331332846993028","recovery_padj":"0.364293670240824","reciprocal_log2fc":"0.496683750427079","reciprocal_shrunk_log2fc":"0.469188892107462","reciprocal_padj":"0.0582426246896616","exclude_pair_log2fc":"0.656585862008563","exclude_pair_shrunk_log2fc":"0.599549452243906","exclude_pair_padj":"0.0936133010844297","five_traceable_log2fc":"0.628166492129274","five_traceable_shrunk_log2fc":"0.602565669340623","five_traceable_padj":"0.0055277238542142","paper_counts_log2fc":"0.525091754798125","paper_counts_shrunk_log2fc":"0.513218105286208","paper_counts_padj":"0.001118595687128","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma05_g26900 | 1 | 1 | RNA and ribosome biogenesis | GO:0006950 | response to stress | 0 | Cellular Component: endoplasmic reticulum membrane (GO:0005789);; Cellular Component: integral component of membrane (GO:0016021);;  | Derlin-2.2 | PREDICTED: derlin-2.2 [Musa acuminata subsp. malaccensis] | -0.370276228874205 | -0.331332846993028 | 0.364293670240824 | 0.496683750427079 | 0.469188892107462 | 0.0582426246896616 | 0.656585862008563 | 0.599549452243906 | 0.0936133010844297 | 0.628166492129274 | 0.602565669340623 | 0.0055277238542142 | 0.525091754798125 | 0.513218105286208 | 0.001118595687128 | True | True


record_id: DS057_R00184
dataset_id: DS057
record_json:
{"gene_id":"Ma06_g00310","robust_pathway_count":"1","robust_module_count":"1","modules":"RNA and ribosome biogenesis","pathways":"GO:0006353 | DNA-templated transcription termination","all_three_pathway_count":"0","GO_annotation":"--","Swiss_Prot_annotation":"Transcription termination factor MTERF15, mitochondrial","NR_annotation":"PREDICTED: transcription termination factor MTERF8, chloroplastic-like [Musa acuminata subsp. malaccensis]","recovery_log2fc":"0.605627440771466","recovery_shrunk_log2fc":"0.265068970090319","recovery_padj":"0.75421056447974","reciprocal_log2fc":"-0.923332605634821","reciprocal_shrunk_log2fc":"-0.817465655177324","reciprocal_padj":"0.0128905222731272","exclude_pair_log2fc":"-1.15401051664494","exclude_pair_shrunk_log2fc":"-1.02976722020885","exclude_pair_padj":"0.0031002912685192","five_traceable_log2fc":"-1.15128291863605","five_traceable_shrunk_log2fc":"-1.08351124076925","five_traceable_padj":"9.41365144195528e-06","paper_counts_log2fc":"-1.93715666692899","paper_counts_shrunk_log2fc":"-1.80448574845305","paper_counts_padj":"6.90945282414241e-13","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma06_g00310 | 1 | 1 | RNA and ribosome biogenesis | GO:0006353 | DNA-templated transcription termination | 0 | -- | Transcription termination factor MTERF15, mitochondrial | PREDICTED: transcription termination factor MTERF8, chloroplastic-like [Musa acuminata subsp. malaccensis] | 0.605627440771466 | 0.265068970090319 | 0.75421056447974 | -0.923332605634821 | -0.817465655177324 | 0.0128905222731272 | -1.15401051664494 | -1.02976722020885 | 0.0031002912685192 | -1.15128291863605 | -1.08351124076925 | 9.41365144195528e-06 | -1.93715666692899 | -1.80448574845305 | 6.90945282414241e-13 | True | True


record_id: DS057_R00185
dataset_id: DS057
record_json:
{"gene_id":"Ma06_g04260","robust_pathway_count":"1","robust_module_count":"1","modules":"RNA and ribosome biogenesis","pathways":"GO:0006353 | DNA-templated transcription termination","all_three_pathway_count":"0","GO_annotation":"Biological Process: cellular process (GO:0009987);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Cellular Component: cytoplasmic part (GO:0044444);; ","Swiss_Prot_annotation":"Transcription termination factor MTEF1, chloroplastic","NR_annotation":"PREDICTED: uncharacterized protein LOC103988199 [Musa acuminata subsp. malaccensis]","recovery_log2fc":"1.14160334276083","recovery_shrunk_log2fc":"0.212891347853705","recovery_padj":"0.747300643758481","reciprocal_log2fc":"-0.623256131722983","reciprocal_shrunk_log2fc":"-0.486740080747595","reciprocal_padj":"0.337625217002447","exclude_pair_log2fc":"-0.627231208312746","exclude_pair_shrunk_log2fc":"-0.44133988373572","exclude_pair_padj":"0.556413356016341","five_traceable_log2fc":"-0.784113957981202","five_traceable_shrunk_log2fc":"-0.621750193479415","five_traceable_padj":"0.218810043785923","paper_counts_log2fc":"2.4208861301855","paper_counts_shrunk_log2fc":"1.2185938900727","paper_counts_padj":"0.0260763313388545","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma06_g04260 | 1 | 1 | RNA and ribosome biogenesis | GO:0006353 | DNA-templated transcription termination | 0 | Biological Process: cellular process (GO:0009987);; Cellular Component: intracellular membrane-bounded organelle (GO:0043231);; Cellular Component: cytoplasmic part (GO:0044444);;  | Transcription termination factor MTEF1, chloroplastic | PREDICTED: uncharacterized protein LOC103988199 [Musa acuminata subsp. malaccensis] | 1.14160334276083 | 0.212891347853705 | 0.747300643758481 | -0.623256131722983 | -0.486740080747595 | 0.337625217002447 | -0.627231208312746 | -0.44133988373572 | 0.556413356016341 | -0.784113957981202 | -0.621750193479415 | 0.218810043785923 | 2.4208861301855 | 1.2185938900727 | 0.0260763313388545 | True | True


record_id: DS057_R00186
dataset_id: DS057
record_json:
{"gene_id":"Ma06_g12640","robust_pathway_count":"1","robust_module_count":"1","modules":"RNA and ribosome biogenesis","pathways":"GO:0043169 | cation binding","all_three_pathway_count":"0","GO_annotation":"Molecular Function: protein serine/threonine phosphatase activity (GO:0004722);; Biological Process: protein dephosphorylation (GO:0006470);; Molecular Function: metal ion binding (GO:0046872);; ","Swiss_Prot_annotation":"Probable protein phosphatase 2C 78","NR_annotation":"PREDICTED: probable protein phosphatase 2C 78 [Musa acuminata subsp. malaccensis]","recovery_log2fc":"-0.428628231614793","recovery_shrunk_log2fc":"-0.368156109376031","recovery_padj":"0.380071154981291","reciprocal_log2fc":"0.783874099834929","reciprocal_shrunk_log2fc":"0.742846070941906","reciprocal_padj":"0.0006688431323217","exclude_pair_log2fc":"0.794855994766269","exclude_pair_shrunk_log2fc":"0.71682788276677","exclude_pair_padj":"0.0494323241349556","five_traceable_log2fc":"0.837042360923521","five_traceable_shrunk_log2fc":"0.793780098627851","five_traceable_padj":"0.0008036433472592","paper_counts_log2fc":"0.882374459039362","paper_counts_shrunk_log2fc":"0.862985763100095","paper_counts_padj":"5.0881645379262e-09","corrected_effect_direction_stable":"True","opposite_recovery_vs_corrected":"True"}

search_text:
Ma06_g12640 | 1 | 1 | RNA and ribosome biogenesis | GO:0043169 | cation binding | 0 | Molecular Function: protein serine/threonine phosphatase activity (GO:0004722);; Biological Process: protein dephosphorylation (GO:0006470);; Molecular Function: metal ion binding (GO:0046872);;  | Probable protein phosphatase 2C 78 | PREDICTED: probable protein phosphatase 2C 78 [Musa acuminata subsp. malaccensis] | -0.428628231614793 | -0.368156109376031 | 0.380071154981291 | 0.783874099834929 | 0.742846070941906 | 0.0006688431323217 | 0.794855994766269 | 0.71682788276677 | 0.0494323241349556 | 0.837042360923521 | 0.793780098627851 | 0.0008036433472592 | 0.882374459039362 | 0.862985763100095 | 5.0881645379262e-09 | True | True


